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Properties
| Property Name | Value |
| TranscriptId | 604341 |
| Track | FilteredModels2 |
| ProteinId | 604255 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_29 | supercontig | scaffold_29:18207..21066 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8853 ID=mRNA_8853|Name=jgi.p|Nanoce1779_2|604255|organism=Nannochloropsis oceanica|type=mRNA|length=1781bp CAGCCACAAGCCACACAGCAGTCTAAGAATCCAGCTACACACCAAGAGAT GGCATCGGTACTGTCGGCAGAGACAAAGGGTGCCGTCTCTCTCCGGCGGC TTTCCTGGGGCAGTCAATCGGGCAAAGATGCCTTCGATACTAGCGGGCGC GAACGTAAGGGCTCCGTCGACACGGCAATGGGATGGGAACTTGACGTACT CGAGGCCCCCCTCCAGGCCAAGACAGACTTCATCGACGACCTCTCCATCC TCTGGCCTCTTAACAAACAAGTCAAAGCCCCGGGAATCATCGCGCCCATC AAGATGCAGATCTCCTCCGATCCCACCACCGAGGCAACCTACGCCCTGGT CAGCACCGTCGATCCTGCTTGCTCCCCGGACAAGACCAGCACCCAGCGTG TCTCTAAGCTGGAGGACCTGTCCCGTGTGCTCGCCAAATTGAACGGAGAC ACAGAGAGGCGGATTGGGGAAGAGGAGAGGGGACAGGCGATCTATGTCAA GGTGGTACGGCCTTCGGGAACGGCGTATACGGTGGTGGATTTGCCGGGAG TGGATGAAAAAGATCCGGAATCCGTCCGTGTGGCGGAGGAGTTTATGCGT GATGAACCCAACAGCCTGATTTTGGTGGTACTGCCCTTGGTAGATGTGTT TGAGCGGGCGTTTCCCATGGCGTTGGCCAAGAGGGTTGACCCGGAGAGTC GGCGAACCATCGGGGTGGTGACCAAGACAGACCTTGTTCAAAAAGAGATG GAGGCATCGGTGAGGGAGGTGTGCGGCCCTGTGCTGCGTGCGTATGCCAC TGCCCTGCTTGGAGAGGCGACCCTGCAGTTGAAGGAAGTGACGCATGTGC TGGTGCAGGAGAAATTCCAGGAGTTCCCGTGGTGGTCGAGATTGGCGTTG GATGCCTATGTGCGCTTGTTGTTGCGACGGGTGTTTTACGCAATTCCTAT GAACATTCGAAACGTGATTTTGAATGAGTTTAGGCGTGATTTGGTGTCCA TGGTGGCGGAGAAATATAACGATGAAACGAAGCTTCGTACGTTGTGGAAG ATCCAACAGCGACAGCAAAGGGTGGAACGAAAGGCGTCTTTGACAGATTT GATGAAGAAGTTGGACATGTTGTAAGGGAGCGATAACGCTAGAAGAGACA GAGTGATATGAGACTTATAATAAGGCGAAGAGGCAAGAAGAGGAAGGCGG GTTATGAGAAGAGAGAATCATGTACTTAAAGAAACAGACAGAGACAAGAA ACAACAAACAGATGAGAGAAGCACGAAGAAGCAGACAGAGAGGCAGACGT AAGCAAGCAGAGACCGAGGTTTTTAGAGACAACAAGACAGAATGACAGAG GAGAAAGCGGGGAAAGTCCGTGGTTCCGTCTACTCGCCCATGCATTCGTT ACAGATTGAAGGTAGGTAGCCGGAAGATAGTGGCTGCAACCCACGTGACG CGTGAGTGGTGGGCACAACAGTAAGTTAATCTTCCGAGTGAGTGAAGCAC TAGCGCGACGAACAACCAACTGAGCCTCATTAGTTACATGTATGTAATAT CAATGTGGCAGAGCGGAACAAGAGATCGCGGAGGGCCAAGTAATGTTGTG CCGAGCGCGTGATCAAAGTAACACAAACAAAAAGAGTAAAGAGAGAGAAG AGGGAAGGGACAGGAAGAACACGCATACGCCAGCTGGAAGAAGAATGCAA ACTATTATGCCCCATTTCTAACTGCACAACTGCCGACCGCGTATATAGTG CCGCACAGAACCAATTTTCACTGCCTCAAAA back to topprotein sequence of jgi.p|Nanoce1779_2|604255 >mRNA_8853-protein ID=mRNA_8853-protein|Name=jgi.p|Nanoce1779_2|604255|organism=Nannochloropsis oceanica|type=polypeptide|length=359bp MASVLSAETKGAVSLRRLSWGSQSGKDAFDTSGRERKGSVDTAMGWELDV LEAPLQAKTDFIDDLSILWPLNKQVKAPGIIAPIKMQISSDPTTEATYAL VSTVDPACSPDKTSTQRVSKLEDLSRVLAKLNGDTERRIGEEERGQAIYV KVVRPSGTAYTVVDLPGVDEKDPESVRVAEEFMRDEPNSLILVVLPLVDV FERAFPMALAKRVDPESRRTIGVVTKTDLVQKEMEASVREVCGPVLRAYA TALLGEATLQLKEVTHVLVQEKFQEFPWWSRLALDAYVRLLLRRVFYAIP MNIRNVILNEFRRDLVSMVAEKYNDETKLRTLWKIQQRQQRVERKASLTD LMKKLDML* back to topmRNA from alignment at scaffold_29:18207..21066+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8853 ID=mRNA_8853|Name=jgi.p|Nanoce1779_2|604255|organism=Nannochloropsis oceanica|type=mRNA|length=2860bp|location=Sequence derived from alignment at scaffold_29:18207..21066+ (Nannochloropsis oceanica) CAGCCACAAGCCACACAGCAGTCTAAGAATCCAGCTACACACCAAGAGAT
GGCATCGGTACTGTCGGCAGAGACAAAGGGTGCCGTCTCTCTCCGGCGGC
TTTCCTGGGGCAGTCAATCGGGCAAAGATGCCTTCGATACTAGCGGGCGC
GAACGTAAGGGCTCCGTCGACACGGCAATGGGATGGGAACTTGACGTACT
CGAGGCCCCCCTCCAGGCCAAGACAGACTTCATCGACGACCTCTCCATCC
TCTGGCCTCTTAACAAACAAGTCAAAGCCCCGGGAATCATCGTCATGGGT
GCCCACGGTGCCGGCAAATCTTCGATCCTGCATGCCTTGACAGGGATGCC
TTTCCCGCATTCCTCTGCCTCGGACAGCACTAGGCGCCCATCAAGATGCA
GATCTCCTCCGATCCCACCACCGAGGCAACCTACGCCCTGGTCAGCACCG
TCGATCCTGCTTGCTCCCCGGACAAGACCAGCACCCAGCGTGTCTCTAAG
CTGGAGGACCTGTCCCGTGTGCTCGCCAAATTGAACGGAGACACAGAGAG
GCGGATTGGGGAAGAGGAGAGGGGACAGGCGATCTATGTCAAGGTGGTAC
GGCCTTCGGGAACGGCGTATACGGTGGTGGATTTGCCGGGAGTGGATGAA
AAAGATCCGGAATCCGTCCGTGTGGCGGAGGAGTTTATGCGTGATGAACC
CAACAGCCTGATTTTGGTGGTACTGCCCTTGGTAGATGTGTTTGAGCGGG
CGTTTCCCATGGCGTTGGCCAAGAGGGTTGACCCGGAGAGTCGGCGAACC
ATCGGGGTGGTGACCAAGACAGACCTTGTTCAAAAAGAGATGGAGGCAGT
GGAGAAGCTTCAATGACCAGCCATACAGGCGTAAGTCTTCCTTTAGGGTA
TATGCTGTGCGTTTGGCCAACGAGAAGGAGAGCATAAGACTCGCAAGCAA
TTATTGGAGAAGGAGCATGCCCTTTTCACGACCAACCCGTTGCTGGCAGG
CTGAGGCCGGAAAGATGGGGCTCGGTGACAGTGAAGAAATTAATTGTGGA
TTACCAGTGCAATGCCATCGGCACCTTGTTCCGGATGTCTGTCGTCGGCT
GCATGCAGAGCTACGGGAGCTGGAGAAGAGGAGGAGGAGGAGGCTGCGGG
CAGAGCCGGAAGGGAAGAAGGGGATGGGAGGAAAGCTGCTGTCCGACCAT
CAAGAATTCTTCAGGAAGCTTTGCACGGATGCGAATAGCCTGGGTTTTGA
AATTGGGGAGTTGGCTCTGAGCAGTGACACCCGGAAGGATCGACAGCTCA
ACTTAGGTGCCCGTCTGACAGGTGCGATCAAAAAGCATGAAGAGGAGGCG
CGGAGAGCCTTGCCGGCAGCTGTTGCAGGCAAGGTGGGCCCCTTGGTTGA
ACCCGTCAGAGGGGGAGGTAGAAGGGACGACTACTGAGCCGCGGGTATAT
GTGAGCCGGGAGACGATGGTCGCATGATTTGTTTCGGAAGTCGGTGAGGG
AGGTGTGCGGCCCTGTGCTGCGTGCGTATGCCACTGCCCTGCTTGGAGAG
GCGACCCTGCAGTTGAAGGAAGTGACGCATGTGCTGGTGCAGGAGAAATT
CCAGGAGTTCCCGTGGTGGTCGAGAGTGTGAAGCATGAGATTAACTTGCT
CTTGCAGAAGAAGAAAGGGGAAGCAGAGAGGGTGCTTGGTCGGATTGTGG
CCTCCGAGATGAACTGGTGCTTCTTGAATGAGGCGGATCTGAATGCCGTC
GAACGAGAAGTAGCTCTTAATATGGCGGGGTAAGTCCGGGGGGGGGCTGG
GGTTTGGAAAGGTGGCGCCATCGGGAGAGCAGCCAAATCAACAGTTGCAC
TGGTCGGCGGAGATGTCGGAGGGTGCTGAGTCCGAGTGAGCGAGACCGTG
GGAAGAAATGGTTTGAGTCGGGTTGACTCGACGAGGGATACGCGTATGCG
GGGAGTTGGCGTTGGATGCCTATGTGCGCTTGTTGTTGCGACGGGTGTTT
TACGCAATTCCTATGAACATTCGAAACGTGATTTTGAATGAGTTTAGGCG
TGATTTGGTGTCCATGGTGGCGGAGAAATATAACGATGAAACGAAGCTTC
GTACGGTCATGTCGGAGGAGTTGTGGAAGATCCAACAGCGACAGCAAAGG
GTGGAACGAAAGGCGTCTTTGACAGATTTGATGAAGAAGTTGGACATGTT
GTAAGGGAGCGATAACGCTAGAAGAGACAGAGTGATATGAGACTTATAAT
AAGGCGAAGAGGCAAGAAGAGGAAGGCGGGTTATGAGAAGAGAGAATCAT
GTACTTAAAGAAACAGACAGAGACAAGAAACAACAAACAGATGAGAGAAG
CACGAAGAAGCAGACAGAGAGGCAGACGTAAGCAAGCAGAGACCGAGGTT
TTTAGAGACAACAAGACAGAATGACAGAGGAGAAAGCGGGGAAAGTCCGT
GGTTCCGTCTACTCGCCCATGCATTCGTTACAGATTGAAGGTAGGTAGCC
GGAAGATAGTGGCTGCAACCCACGTGACGCGTGAGTGGTGGGCACAACAG
TAAGTTAATCTTCCGAGTGAGTGAAGCACTAGCGCGACGAACAACCAACT
GAGCCTCATTAGTTACATGTATGTAATATCAATGTGGCAGAGCGGAACAA
GAGATCGCGGAGGGCCAAGTAATGTTGTGCCGAGCGCGTGATCAAAGTAA
CACAAACAAAAAGAGTAAAGAGAGAGAAGAGGGAAGGGACAGGAAGAACA
CGCATACGCCAGCTGGAAGAAGAATGCAAACTATTATGCCCCATTTCTAA
CTGCACAACTGCCGACCGCGTATATAGTGCCGCACAGAACCAATTTTCAC
TGCCTCAAAA back to topCoding sequence (CDS) from alignment at scaffold_29:18207..21066+ >mRNA_8853 ID=mRNA_8853|Name=jgi.p|Nanoce1779_2|604255|organism=Nannochloropsis oceanica|type=CDS|length=5385bp|location=Sequence derived from alignment at scaffold_29:18207..21066+ (Nannochloropsis oceanica) ATGGCATCGGTACTGTCGGCAGAGACAAAGGGTGCCGTCTCTCTCCGGCG GCTTTCCTGGGGCAGTCAATCGGGCAAAGATGCCTTCGATACTAGCGGGC GCGAACGTAAGGGCTCCGTCGACACGGCAATGGGATGGGAACTTGACGTA CTCGAGGCCCCCCTCCAGGCCAAGACAGACTTCATCGACGACCTCTCCAT CCTCTGGCCTCTTAACAAACAAGTCAAAGCCCCGGGAATCATCGCGCCCA TCAAGATGCAGATCTCCTCCGATCCCACCACCGAGGCAACCTACGCCCTG GTCAGCACCGTCGATCCTGCTTGCTCCCCGGACAAGACCAGCACCCAGCG TGTCTCTAAGCTGGAGGACCTGTCCCGTGTGCTCGCCAAATTGAACGGAG ACACAGAGAGGCGGATTGGGGAAGAGGAGAGGGGACAGGCGATCTATGTC AAGGTGGTACGGCCTTCGGGAACGGCGTATACGGTGGTGGATTTGCCGGG AGTGGATGAAAAAGATCCGGAATCCGTCCGTGTGGCGGAGGAGTTTATGC GTGATGAACCCAACAGCCTGATTTTGGTGGTACTGCCCTTGGTAGATGTG TTTGAGCGGGCGTTTCCCATGGCGTTGGCCAAGAGGGTTGACCCGGAGAG TCGGCGAACCATCGGGGTGGTGACCAAGACAGACCTTGTTCAAAAAGAGA TGGAGGCATCGGTGAGGGAGGTGTGCGGCCCTGTGCTGCGTGCGTATGCC ACTGCCCTGCTTGGAGAGGCGACCCTGCAGTTGAAGGAAGTGACGCATGT GCTGGTGCAGGAGAAATTCCAGGAGTTCCCGTGGTGGTCGAGATTGGCGT TGGATGCCTATGTGCGCTTGTTGTTGCGACGGGTGTTTTACGCAATTCCT ATGAACATTCGAAACGTGATTTTGAATGAGTTTAGGCGTGATTTGGTGTC CATGGTGGCGGAGAAATATAACGATGAAACGAAGCTTCGTACGTTGTGGA AGATCCAACAGCGACAGCAAAGGGTGGAACGAAAGGCGTCTTTGACAGAT TTGATGAAGAAGTTGGACATGTTGTAAATGGCATCGGTACTGTCGGCAGA GACAAAGGGTGCCGTCTCTCTCCGGCGGCTTTCCTGGGGCAGTCAATCGG GCAAAGATGCCTTCGATACTAGCGGGCGCGAACGTAAGGGCTCCGTCGAC ACGGCAATGGGATGGGAACTTGACGTACTCGAGGCCCCCCTCCAGGCCAA GACAGACTTCATCGACGACCTCTCCATCCTCTGGCCTCTTAACAAACAAG TCAAAGCCCCGGGAATCATCGCGCCCATCAAGATGCAGATCTCCTCCGAT CCCACCACCGAGGCAACCTACGCCCTGGTCAGCACCGTCGATCCTGCTTG CTCCCCGGACAAGACCAGCACCCAGCGTGTCTCTAAGCTGGAGGACCTGT CCCGTGTGCTCGCCAAATTGAACGGAGACACAGAGAGGCGGATTGGGGAA GAGGAGAGGGGACAGGCGATCTATGTCAAGGTGGTACGGCCTTCGGGAAC GGCGTATACGGTGGTGGATTTGCCGGGAGTGGATGAAAAAGATCCGGAAT CCGTCCGTGTGGCGGAGGAGTTTATGCGTGATGAACCCAACAGCCTGATT TTGGTGGTACTGCCCTTGGTAGATGTGTTTGAGCGGGCGTTTCCCATGGC GTTGGCCAAGAGGGTTGACCCGGAGAGTCGGCGAACCATCGGGGTGGTGA CCAAGACAGACCTTGTTCAAAAAGAGATGGAGGCATCGGTGAGGGAGGTG TGCGGCCCTGTGCTGCGTGCGTATGCCACTGCCCTGCTTGGAGAGGCGAC CCTGCAGTTGAAGGAAGTGACGCATGTGCTGGTGCAGGAGAAATTCCAGG AGTTCCCGTGGTGGTCGAGATTGGCGTTGGATGCCTATGTGCGCTTGTTG TTGCGACGGGTGTTTTACGCAATTCCTATGAACATTCGAAACGTGATTTT GAATGAGTTTAGGCGTGATTTGGTGTCCATGGTGGCGGAGAAATATAACG ATGAAACGAAGCTTCGTACGTTGTGGAAGATCCAACAGCGACAGCAAAGG GTGGAACGAAAGGCGTCTTTGACAGATTTGATGAAGAAGTTGGACATGTT GTAAATGGCATCGGTACTGTCGGCAGAGACAAAGGGTGCCGTCTCTCTCC GGCGGCTTTCCTGGGGCAGTCAATCGGGCAAAGATGCCTTCGATACTAGC GGGCGCGAACGTAAGGGCTCCGTCGACACGGCAATGGGATGGGAACTTGA CGTACTCGAGGCCCCCCTCCAGGCCAAGACAGACTTCATCGACGACCTCT CCATCCTCTGGCCTCTTAACAAACAAGTCAAAGCCCCGGGAATCATCGCG CCCATCAAGATGCAGATCTCCTCCGATCCCACCACCGAGGCAACCTACGC CCTGGTCAGCACCGTCGATCCTGCTTGCTCCCCGGACAAGACCAGCACCC AGCGTGTCTCTAAGCTGGAGGACCTGTCCCGTGTGCTCGCCAAATTGAAC GGAGACACAGAGAGGCGGATTGGGGAAGAGGAGAGGGGACAGGCGATCTA TGTCAAGGTGGTACGGCCTTCGGGAACGGCGTATACGGTGGTGGATTTGC CGGGAGTGGATGAAAAAGATCCGGAATCCGTCCGTGTGGCGGAGGAGTTT ATGCGTGATGAACCCAACAGCCTGATTTTGGTGGTACTGCCCTTGGTAGA TGTGTTTGAGCGGGCGTTTCCCATGGCGTTGGCCAAGAGGGTTGACCCGG AGAGTCGGCGAACCATCGGGGTGGTGACCAAGACAGACCTTGTTCAAAAA GAGATGGAGGCATCGGTGAGGGAGGTGTGCGGCCCTGTGCTGCGTGCGTA TGCCACTGCCCTGCTTGGAGAGGCGACCCTGCAGTTGAAGGAAGTGACGC ATGTGCTGGTGCAGGAGAAATTCCAGGAGTTCCCGTGGTGGTCGAGATTG GCGTTGGATGCCTATGTGCGCTTGTTGTTGCGACGGGTGTTTTACGCAAT TCCTATGAACATTCGAAACGTGATTTTGAATGAGTTTAGGCGTGATTTGG TGTCCATGGTGGCGGAGAAATATAACGATGAAACGAAGCTTCGTACGTTG TGGAAGATCCAACAGCGACAGCAAAGGGTGGAACGAAAGGCGTCTTTGAC AGATTTGATGAAGAAGTTGGACATGTTGTAAATGGCATCGGTACTGTCGG CAGAGACAAAGGGTGCCGTCTCTCTCCGGCGGCTTTCCTGGGGCAGTCAA TCGGGCAAAGATGCCTTCGATACTAGCGGGCGCGAACGTAAGGGCTCCGT CGACACGGCAATGGGATGGGAACTTGACGTACTCGAGGCCCCCCTCCAGG CCAAGACAGACTTCATCGACGACCTCTCCATCCTCTGGCCTCTTAACAAA CAAGTCAAAGCCCCGGGAATCATCGCGCCCATCAAGATGCAGATCTCCTC CGATCCCACCACCGAGGCAACCTACGCCCTGGTCAGCACCGTCGATCCTG CTTGCTCCCCGGACAAGACCAGCACCCAGCGTGTCTCTAAGCTGGAGGAC CTGTCCCGTGTGCTCGCCAAATTGAACGGAGACACAGAGAGGCGGATTGG GGAAGAGGAGAGGGGACAGGCGATCTATGTCAAGGTGGTACGGCCTTCGG GAACGGCGTATACGGTGGTGGATTTGCCGGGAGTGGATGAAAAAGATCCG GAATCCGTCCGTGTGGCGGAGGAGTTTATGCGTGATGAACCCAACAGCCT GATTTTGGTGGTACTGCCCTTGGTAGATGTGTTTGAGCGGGCGTTTCCCA TGGCGTTGGCCAAGAGGGTTGACCCGGAGAGTCGGCGAACCATCGGGGTG GTGACCAAGACAGACCTTGTTCAAAAAGAGATGGAGGCATCGGTGAGGGA GGTGTGCGGCCCTGTGCTGCGTGCGTATGCCACTGCCCTGCTTGGAGAGG CGACCCTGCAGTTGAAGGAAGTGACGCATGTGCTGGTGCAGGAGAAATTC CAGGAGTTCCCGTGGTGGTCGAGATTGGCGTTGGATGCCTATGTGCGCTT GTTGTTGCGACGGGTGTTTTACGCAATTCCTATGAACATTCGAAACGTGA TTTTGAATGAGTTTAGGCGTGATTTGGTGTCCATGGTGGCGGAGAAATAT AACGATGAAACGAAGCTTCGTACGTTGTGGAAGATCCAACAGCGACAGCA AAGGGTGGAACGAAAGGCGTCTTTGACAGATTTGATGAAGAAGTTGGACA TGTTGTAAATGGCATCGGTACTGTCGGCAGAGACAAAGGGTGCCGTCTCT CTCCGGCGGCTTTCCTGGGGCAGTCAATCGGGCAAAGATGCCTTCGATAC TAGCGGGCGCGAACGTAAGGGCTCCGTCGACACGGCAATGGGATGGGAAC TTGACGTACTCGAGGCCCCCCTCCAGGCCAAGACAGACTTCATCGACGAC CTCTCCATCCTCTGGCCTCTTAACAAACAAGTCAAAGCCCCGGGAATCAT CGCGCCCATCAAGATGCAGATCTCCTCCGATCCCACCACCGAGGCAACCT ACGCCCTGGTCAGCACCGTCGATCCTGCTTGCTCCCCGGACAAGACCAGC ACCCAGCGTGTCTCTAAGCTGGAGGACCTGTCCCGTGTGCTCGCCAAATT GAACGGAGACACAGAGAGGCGGATTGGGGAAGAGGAGAGGGGACAGGCGA TCTATGTCAAGGTGGTACGGCCTTCGGGAACGGCGTATACGGTGGTGGAT TTGCCGGGAGTGGATGAAAAAGATCCGGAATCCGTCCGTGTGGCGGAGGA GTTTATGCGTGATGAACCCAACAGCCTGATTTTGGTGGTACTGCCCTTGG TAGATGTGTTTGAGCGGGCGTTTCCCATGGCGTTGGCCAAGAGGGTTGAC CCGGAGAGTCGGCGAACCATCGGGGTGGTGACCAAGACAGACCTTGTTCA AAAAGAGATGGAGGCATCGGTGAGGGAGGTGTGCGGCCCTGTGCTGCGTG CGTATGCCACTGCCCTGCTTGGAGAGGCGACCCTGCAGTTGAAGGAAGTG ACGCATGTGCTGGTGCAGGAGAAATTCCAGGAGTTCCCGTGGTGGTCGAG ATTGGCGTTGGATGCCTATGTGCGCTTGTTGTTGCGACGGGTGTTTTACG CAATTCCTATGAACATTCGAAACGTGATTTTGAATGAGTTTAGGCGTGAT TTGGTGTCCATGGTGGCGGAGAAATATAACGATGAAACGAAGCTTCGTAC GTTGTGGAAGATCCAACAGCGACAGCAAAGGGTGGAACGAAAGGCGTCTT TGACAGATTTGATGAAGAAGTTGGACATGTTGTAA back to top
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