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Properties
| Property Name | Value |
|---|
| TranscriptId | 633266 |
| Track | FilteredModels2 |
| ProteinId | 633180 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_28 | supercontig | scaffold_28:312982..314599 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8845 ID=mRNA_8845|Name=jgi.p|Nanoce1779_2|633180|organism=Nannochloropsis oceanica|type=mRNA|length=1618bp
AAACCCGGAGGAAAGCCACCAGAGGGGCGTGCTTTAGATGACAAAATGTT
GTTGGTAATGCCTCAGTTTTTTATGGACCCGGGGCTGTGGACCCAGCAGC
CAGCCTTGGCTGCTTGTCTCACTTGCCCTCTTCTGTTGAGCGGCCTTACA
GTCAATACCACCAACGCTACAGCCACCCGTGTAGGTTTGTCGCATCGCTC
TCGTCCTTGTGCAGGGGACTGTGTCAGTGTCTGGTATCGTAGTGGTGGAT
GTGGGTTTTGCCTTTCTCCTTCTTTGCTACGTGCACATCATCGTGCACGG
CAATCCTCCTCCCTCTTTTGGTCTTGCCCGTTGGCACACTAGGCAGTGCG
CACCCGCGCCGCCACCATTTTGTGGTGTAGCACGCATTTTGTGAAGACGT
CTATCTGGTACCCGAGCTGGTGTGGTTCGGAATAGCTTTGTTGTACGCTT
GGAAACCGACCTCAAACACTCACTTGCCCTCCCTCCCTCCCACACACAAC
AACCTGCACTGCTGCTTGCTTTGCTGCTCGCTGCCACCATCAGCCACGAC
CACCAGAGGGACAGCATGCTTAGCAGCCTGGCTACGAAGGCAGGAGCCAT
GGCGAGGAGACGCGGCGCGCTTTTCGGCACAGGTAAGGTGGCTTGTGTAG
ATGCACCTTGGGGAGGAGGGTTTGTTGGTGGCCGTGGGGAGGGACGTTCG
GTGCACGCGACTGCCTCCTGCCCGCGGTATGTAGATCCATTTTCGTCGGC
CTACCTGCCCTGTATGCGTTTCAATCTTTGCTGTGTGGACAAGAGGCCGC
GCAAGGTGTTGACGCACAAGCACATCCATACACGCCAACAGGGAAGGGAC
GCGGGCTGCGGGGGGCGTTCCTCTCGACACTTCAAACGGGGACGGGGACA
GACAGTAGGGGGGGGGTCCGCGAAGGAGTACGCGGTAGGCCTCCAGATCG
TTGGTGGGGTGCTAGGGGTCGCTAGCTTTACCGCCGTGGCCGTCCATCGT
CTCGACCAGCGGGAGATCAAGCGTGTGGAGGGCGAGCGAGCGGTGGAGCT
GAAATTGGCAGCGGCGGAGATCAAGCGTGTGGAGGGTGAGCGAAGGTTGT
CCGAGGAGCGTCTGAGGGCGGAGGTGGACCGATATAAATACGACCTACAA
CTTAGGTTCACCCAAGACTTCAAACCGTATCAAGCCGCAAAGGAGGAGGC
AAACAAAGAGAGAGGAGGATCAAGAGGGCGGCAAAAGGAAGAGAAGACGG
AGTAGTTTTTCAAACTTAAGAGTGTAGCTGTACAAAAATATGTGAACGAC
ACACCAAAGACATGTACAGTGGCCGGGGATATAAGGAAGAGGTGGGGACG
GGACTGAACAAAAATGTCGAAAGGAGGGCTCTTAAAATGTTTCGACCGTG
GTGCGTTCCTTCTTTCTCTCTTTTGATTCTCTGGTCATTTCTTTAATCTC
TGCCGCACTACTGCTGCCAGCTACTCATCCAACTTATCAAGATCCGCAGC
TTGTCATGAGGGGCTCGTGCAGACTTGGTGGGGACGAGGGGAGGCCTAAA
ATGAGAGCAGGCAGGGAGTCAAGGAACGATAGCAAATACTTTGAAACCCG
GAGGAAAGCCACCAGAGG back to topprotein sequence of jgi.p|Nanoce1779_2|633180 >mRNA_8845-protein ID=mRNA_8845-protein|Name=jgi.p|Nanoce1779_2|633180|organism=Nannochloropsis oceanica|type=polypeptide|length=230bp
MLSSLATKAGAMARRRGALFGTGKVACVDAPWGGGFVGGRGEGRSVHATA
SCPRYVDPFSSAYLPCMRFNLCCVDKRPRKVLTHKHIHTRQQGRDAGCGG
RSSRHFKRGRGQTVGGGSAKEYAVGLQIVGGVLGVASFTAVAVHRLDQRE
IKRVEGERAVELKLAAAEIKRVEGERRLSEERLRAEVDRYKYDLQLRFTQ
DFKPYQAAKEEANKERGGSRGRQKEEKTE* back to topmRNA from alignment at scaffold_28:312982..314599- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8845 ID=mRNA_8845|Name=jgi.p|Nanoce1779_2|633180|organism=Nannochloropsis oceanica|type=mRNA|length=1618bp|location=Sequence derived from alignment at scaffold_28:312982..314599- (Nannochloropsis oceanica)
AAACCCGGAGGAAAGCCACCAGAGGGGCGTGCTTTAGATGACAAAATGTT
GTTGGTAATGCCTCAGTTTTTTATGGACCCGGGGCTGTGGACCCAGCAGC
CAGCCTTGGCTGCTTGTCTCACTTGCCCTCTTCTGTTGAGCGGCCTTACA
GTCAATACCACCAACGCTACAGCCACCCGTGTAGGTTTGTCGCATCGCTC
TCGTCCTTGTGCAGGGGACTGTGTCAGTGTCTGGTATCGTAGTGGTGGAT
GTGGGTTTTGCCTTTCTCCTTCTTTGCTACGTGCACATCATCGTGCACGG
CAATCCTCCTCCCTCTTTTGGTCTTGCCCGTTGGCACACTAGGCAGTGCG
CACCCGCGCCGCCACCATTTTGTGGTGTAGCACGCATTTTGTGAAGACGT
CTATCTGGTACCCGAGCTGGTGTGGTTCGGAATAGCTTTGTTGTACGCTT
GGAAACCGACCTCAAACACTCACTTGCCCTCCCTCCCTCCCACACACAAC
AACCTGCACTGCTGCTTGCTTTGCTGCTCGCTGCCACCATCAGCCACGAC
CACCAGAGGGACAGCATGCTTAGCAGCCTGGCTACGAAGGCAGGAGCCAT
GGCGAGGAGACGCGGCGCGCTTTTCGGCACAGGTAAGGTGGCTTGTGTAG
ATGCACCTTGGGGAGGAGGGTTTGTTGGTGGCCGTGGGGAGGGACGTTCG
GTGCACGCGACTGCCTCCTGCCCGCGGTATGTAGATCCATTTTCGTCGGC
CTACCTGCCCTGTATGCGTTTCAATCTTTGCTGTGTGGACAAGAGGCCGC
GCAAGGTGTTGACGCACAAGCACATCCATACACGCCAACAGGGAAGGGAC
GCGGGCTGCGGGGGGCGTTCCTCTCGACACTTCAAACGGGGACGGGGACA
GACAGTAGGGGGGGGGTCCGCGAAGGAGTACGCGGTAGGCCTCCAGATCG
TTGGTGGGGTGCTAGGGGTCGCTAGCTTTACCGCCGTGGCCGTCCATCGT
CTCGACCAGCGGGAGATCAAGCGTGTGGAGGGCGAGCGAGCGGTGGAGCT
GAAATTGGCAGCGGCGGAGATCAAGCGTGTGGAGGGTGAGCGAAGGTTGT
CCGAGGAGCGTCTGAGGGCGGAGGTGGACCGATATAAATACGACCTACAA
CTTAGGTTCACCCAAGACTTCAAACCGTATCAAGCCGCAAAGGAGGAGGC
AAACAAAGAGAGAGGAGGATCAAGAGGGCGGCAAAAGGAAGAGAAGACGG
AGTAGTTTTTCAAACTTAAGAGTGTAGCTGTACAAAAATATGTGAACGAC
ACACCAAAGACATGTACAGTGGCCGGGGATATAAGGAAGAGGTGGGGACG
GGACTGAACAAAAATGTCGAAAGGAGGGCTCTTAAAATGTTTCGACCGTG
GTGCGTTCCTTCTTTCTCTCTTTTGATTCTCTGGTCATTTCTTTAATCTC
TGCCGCACTACTGCTGCCAGCTACTCATCCAACTTATCAAGATCCGCAGC
TTGTCATGAGGGGCTCGTGCAGACTTGGTGGGGACGAGGGGAGGCCTAAA
ATGAGAGCAGGCAGGGAGTCAAGGAACGATAGCAAATACTTTGAAACCCG
GAGGAAAGCCACCAGAGG back to topCoding sequence (CDS) from alignment at scaffold_28:312982..314599- >mRNA_8845 ID=mRNA_8845|Name=jgi.p|Nanoce1779_2|633180|organism=Nannochloropsis oceanica|type=CDS|length=690bp|location=Sequence derived from alignment at scaffold_28:312982..314599- (Nannochloropsis oceanica)
ATGCTTAGCAGCCTGGCTACGAAGGCAGGAGCCATGGCGAGGAGACGCGG
CGCGCTTTTCGGCACAGGTAAGGTGGCTTGTGTAGATGCACCTTGGGGAG
GAGGGTTTGTTGGTGGCCGTGGGGAGGGACGTTCGGTGCACGCGACTGCC
TCCTGCCCGCGGTATGTAGATCCATTTTCGTCGGCCTACCTGCCCTGTAT
GCGTTTCAATCTTTGCTGTGTGGACAAGAGGCCGCGCAAGGTGTTGACGC
ACAAGCACATCCATACACGCCAACAGGGAAGGGACGCGGGCTGCGGGGGG
CGTTCCTCTCGACACTTCAAACGGGGACGGGGACAGACAGTAGGGGGGGG
GTCCGCGAAGGAGTACGCGGTAGGCCTCCAGATCGTTGGTGGGGTGCTAG
GGGTCGCTAGCTTTACCGCCGTGGCCGTCCATCGTCTCGACCAGCGGGAG
ATCAAGCGTGTGGAGGGCGAGCGAGCGGTGGAGCTGAAATTGGCAGCGGC
GGAGATCAAGCGTGTGGAGGGTGAGCGAAGGTTGTCCGAGGAGCGTCTGA
GGGCGGAGGTGGACCGATATAAATACGACCTACAACTTAGGTTCACCCAA
GACTTCAAACCGTATCAAGCCGCAAAGGAGGAGGCAAACAAAGAGAGAGG
AGGATCAAGAGGGCGGCAAAAGGAAGAGAAGACGGAGTAG back to top
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