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Properties
Property Name | Value |
TranscriptId | 604276 |
Track | FilteredModels2 |
ProteinId | 604190 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_28 | supercontig | scaffold_28:280582..282897 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8831 ID=mRNA_8831|Name=jgi.p|Nanoce1779_2|604190|organism=Nannochloropsis oceanica|type=mRNA|length=1390bp ACAGGCCTTGGGGTAGGATGGCCGGACGCCGGAACCCTCCTGAGCCACGG GACTGGGACGAAGGCTTTGCCGCCCTTACAACCTTGTGGACAGAGCCCTG TTTCGCTGCCTACAGCTCACAGCAGCCGATGGAACGTCGGACCAACTACA CATGTCGGGATTTTACCGAGGCGTACACCCTCTGCTGGGACATGAGCACG CAACGTGCCCCCTTTAATTGGGCGGATGAGCTCTATCGCGGCTACCTGCA TTCTCTGGCTTCTTATGCGCAGCAGCATGTATGTCGTGGGATGGAGCGGT CGGCCTCAGACGACCAGACCCTCCTCCTGGAGCTCTCCGCTAGGTGGGCG CAGTACAAATGCATGGTCAACGACTATCACCGCGTCTTCATCATCCTTGA CCGGTACTACCTGCGCCACAACGGCCTGGTCGCCTTGGGACCTGCGGGGC GGGCCACCTTCTGGCGAGAGGGGTGCAGCCCCTCGGTCCAGCACCGAGTC AAGAAAGCCATCCTTCGAGGCGCAGGTGCAGAGAGGGAGGACAGAAGGGA GGAAAAGAGGGAGGAGGAGGGGAGGGAGGAGTGTGGGAAGAGGTTGAAAT TCGGTGCTCTGTCATGTTCGTGCAGCTTTTCCTCCTCTCCTCCCTCCTCT CCCCCCTCCTCCATGTCCTGCCGGCCATGCAGGCAGTGGCGGGAGCAGCA GCAGGAGCAGAGAAAAGAGACAGAGAGGGGGTTAGGAGGTGAGGATAGAG GAGCGGCACCGATCGAGGAACACCTGAGGAGGCCCCTCACTGGTATGGCC CTCGCCGCTCTTGTGGAGATATCACCAGAGGCTGCAAAGGAGGTCGGTGT GAAGCTGAAGAAGGAGCACGGCCTCGATAGCGCCGACGTGCAAGGATGGG AGAAGGTAGGGGAGAAAGGAGGGGGAAAGGGAGCAAAGGGGGTAGGGAAG GAAAGGAAGCAAGGTTAGAACGGATCGAAAGTACAGCGTCCTGTGACAGT TAACCCTCTTTCCTCTCATTCTCCGCATTTCTCGTCCTTCTTTTCTCGAA TATCCCGTTCCTCGGTTTCCGTATCCCCTGTCCATCCTCCCCCCTTCCCT CCCGCTCCCCAGCCCTCGCTCCAGTCTTCCCTCTTCCCCCGTCTCTCCTC AGGCGTCCTACCACTGGGCCCCTCCCAGGTCTCCATGGTCTATCGCTACT ACCTCCTCAAGCTGCGGGTGCTGAGCGAGAAAGGGGCGAGAGGTGAGGTA GGTGCGGAGGAGACAGGAGGGTACCCATATTCAGTTGAGCCCTGTCGAGT GCAGGTGGACGAAGGAAAAATGAAAGGGAGGGAGGAGGAAGATGAGGTCG TGCGCTCAGGGTTGTCAACCTCGCCCGGTGCGGGCAGAGG back to topprotein sequence of jgi.p|Nanoce1779_2|604190 >mRNA_8831-protein ID=mRNA_8831-protein|Name=jgi.p|Nanoce1779_2|604190|organism=Nannochloropsis oceanica|type=polypeptide|length=317bp MAGRRNPPEPRDWDEGFAALTTLWTEPCFAAYSSQQPMERRTNYTCRDFT EAYTLCWDMSTQRAPFNWADELYRGYLHSLASYAQQHVCRGMERSASDDQ TLLLELSARWAQYKCMVNDYHRVFIILDRYYLRHNGLVALGPAGRATFWR EGCSPSVQHRVKKAILRGAGAEREDRREEKREEEGREECGKRLKFGALSC SCSFSSSPPSSPPSSMSCRPCRQWREQQQEQRKETERGLGGEDRGAAPIE EHLRRPLTGMALAALVEISPEAAKEVGVKLKKEHGLDSADVQGWEKVGEK GGGKGAKGVGKERKQG* back to topmRNA from alignment at scaffold_28:280582..282897+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8831 ID=mRNA_8831|Name=jgi.p|Nanoce1779_2|604190|organism=Nannochloropsis oceanica|type=mRNA|length=2316bp|location=Sequence derived from alignment at scaffold_28:280582..282897+ (Nannochloropsis oceanica) ACAGGCCTTGGGGTAGGATGGCCGGACGCCGGAACCCTCCTGAGCCACGG
GACTGGGACGAAGGCTTTGCCGGTATGTGGAATGGGAGGGATAAGAGAGG
AAGTGAAGGTAGAGATACTGCTATAATATGATATGCGATTCGCCGTCATG
ATCTGCCAGCACCCAAACCCGATATGCTGTCTAAGTTGCGTGGGCTACGG
CTGCCTTTCTCTGTGTGTCATCACTTACTTGCGTCCCATCCTTCTACAAG
CCCTATCATCGCCAGCCAACCCACCCTTCCCACCCTTCTTCCATCCTTCA
TATATTCTTTCAAGCCCTTACAACCTTGTGGACAGAGCCCTGTTTCGCTG
CCTACAGCTCACAGCAGCCGATGGAACGTCGGACCAACTACACATGTCGG
GATTTTACCGAGGTAGGGAGGTAGGGACGGAAGGAGGGAGGAAACGCAAG
TGACCAAGAAAAACGGTAGCAAGGGTGACGCCGCATCTCTTTCGTCCTCT
TCTGGCTGTGAGAGAGTCGTCATTCCAGTCCGTCCCCCTCTCCCTCTTTC
CCTCCCTCCCTTCCTCCAGGCGTACACCCTCTGCTGGGACATGAGCACGC
AACGTGCCCCCTTTAATTGGGCGGATGAGCTCTATCGCGGCTACCTGCAT
TCTCTGGCTTCTTATGCGCAGCAGCATGTATGTCGTGGGATGGAGCGGTC
GGCCTCAGGTAGGAGGTTGAAAAAGCTTGGATGGAAGGAAATGAGGGAGG
ACGCAGAATAAGAAAAGGGGCATGGGAACAAATGCATGCAGGTGAGTATG
CATCTGGATAGACTCAAACTATCTGTCTCAAGCACCTTTTTACCCTCTCC
CTCTCCCTCCCTCCCACCCCCCCTTTCTCTCTCCCGCCCTCCCCCAGACG
ACCAGACCCTCCTCCTGGAGCTCTCCGCTAGGTGGGCGCAGTACAAATGC
ATGGTCAACGACTATCACCGCGTCTTCATCATCCTTGACCGGTACTACCT
GCGCCACAACGGCCTGGTCGCCTTGGGACCTGCGGGTACGTTCACTCTCC
CTCTTTCTCTCCTTTCGTCGCTTCCCCTCTCCCTCCAACGGGCGCATGTT
TGTCATCTTCGAAGCCTACTACCTCCACTGCTATGGCCCAGCCCGCGGCC
TTGGACTCTCCACGTATGTGTTTTCCATTGCCCACATCTACTTTCTCCCT
CCATCCCTCCCTACCTACCTCCCGCCTCCTCAGGGCGGGCCACCTTCTGG
CGAGAGGGGTGCAGCCCCTCGGTCCAGCACCGAGTCAAGAAAGCCATCCT
TCGAGGCGCAGGTGCAGAGAGGGAGGACAGAAGGGAGGAAAAGAGGGAGG
AGGAGGGGAGGGAGGAGTGTGGGAAGAGGTTGAAATTCGGTGCTCTGTCA
TGTTCGTGCAGCTTTTCCTCCTCTCCTCCCTCCTCTCCCCCCTCCTCCAT
GTCCTGCCGGCCATGCAGGCAGTGGCGGGAGCAGCAGCAGGAGCAGAGAA
AAGAGACAGAGAGGGGGTTAGGAGGTGAGGATAGAGGAGCGGCACCGATC
GAGGAACACCTGAGGAGGCCCCTCACTGGTATGGCCCTCGCCGCTCTTGT
GGAGGTAAGGGCGGGTATCTCACATTTAAAACCTCCCTTTCCTCTCTCCT
TCCTTCATCCTTCGACGCCCTGCCCGTACCGCCTTGTCTACTGATTCTCC
CTATCTCTCCCTCCTACCTTCTTTTTTTCTGTCCTTCCTTTCAGATATCA
CCAGAGGCTGCAAAGGAGGTCGGTGTGAAGCTGAAGAAGGAGCACGGCCT
CGATAGCGCCGACGTGCAAGGATGGGAGAAGGTAGGGGAGAAAGGAGGGG
GAAAGGGAGCAAAGGGGGTAGGGAAGGAAAGGAAGCAAGGTTAGAACGGA
TCGAAAGTACAGCGTCCTGTGACAGTTAACCCTCTTTCCTCTCATTCTCC
GCATTTCTCGTCCTTCTTTTCTCGAATATCCCGTTCCTCGGTTTCCGTAT
CCCCTGTCCATCCTCCCCCCTTCCCTCCCGCTCCCCAGCCCTCGCTCCAG
TCTTCCCTCTTCCCCCGTCTCTCCTCAGGCGTCCTACCACTGGGCCCCTC
CCAGGTCTCCATGGTCTATCGCTACTACCTCCTCAAGCTGCGGGTGCTGA
GCGAGAAAGGGGCGAGAGGTGAGGTAGGTGCGGAGGAGACAGGAGGGTAC
CCATATTCAGTTGAGCCCTGTCGAGTGCAGGTGGACGAAGGAAAAATGAA
AGGGAGGGAGGAGGAAGATGAGGTCGTGCGCTCAGGGTTGTCAACCTCGC
CCGGTGCGGGCAGAGG back to topCoding sequence (CDS) from alignment at scaffold_28:280582..282897+ >mRNA_8831 ID=mRNA_8831|Name=jgi.p|Nanoce1779_2|604190|organism=Nannochloropsis oceanica|type=CDS|length=5706bp|location=Sequence derived from alignment at scaffold_28:280582..282897+ (Nannochloropsis oceanica) ATGGCCGGACGCCGGAACCCTCCTGAGCCACGGGACTGGGACGAAGGCTT TGCCGCCCTTACAACCTTGTGGACAGAGCCCTGTTTCGCTGCCTACAGCT CACAGCAGCCGATGGAACGTCGGACCAACTACACATGTCGGGATTTTACC GAGGCGTACACCCTCTGCTGGGACATGAGCACGCAACGTGCCCCCTTTAA TTGGGCGGATGAGCTCTATCGCGGCTACCTGCATTCTCTGGCTTCTTATG CGCAGCAGCATGTATGTCGTGGGATGGAGCGGTCGGCCTCAGACGACCAG ACCCTCCTCCTGGAGCTCTCCGCTAGGTGGGCGCAGTACAAATGCATGGT CAACGACTATCACCGCGTCTTCATCATCCTTGACCGGTACTACCTGCGCC ACAACGGCCTGGTCGCCTTGGGACCTGCGGGGCGGGCCACCTTCTGGCGA GAGGGGTGCAGCCCCTCGGTCCAGCACCGAGTCAAGAAAGCCATCCTTCG AGGCGCAGGTGCAGAGAGGGAGGACAGAAGGGAGGAAAAGAGGGAGGAGG AGGGGAGGGAGGAGTGTGGGAAGAGGTTGAAATTCGGTGCTCTGTCATGT TCGTGCAGCTTTTCCTCCTCTCCTCCCTCCTCTCCCCCCTCCTCCATGTC CTGCCGGCCATGCAGGCAGTGGCGGGAGCAGCAGCAGGAGCAGAGAAAAG AGACAGAGAGGGGGTTAGGAGGTGAGGATAGAGGAGCGGCACCGATCGAG GAACACCTGAGGAGGCCCCTCACTGGTATGGCCCTCGCCGCTCTTGTGGA GATATCACCAGAGGCTGCAAAGGAGGTCGGTGTGAAGCTGAAGAAGGAGC ACGGCCTCGATAGCGCCGACGTGCAAGGATGGGAGAAGGTAGGGGAGAAA GGAGGGGGAAAGGGAGCAAAGGGGGTAGGGAAGGAAAGGAAGCAAGGTTA GATGGCCGGACGCCGGAACCCTCCTGAGCCACGGGACTGGGACGAAGGCT TTGCCGCCCTTACAACCTTGTGGACAGAGCCCTGTTTCGCTGCCTACAGC TCACAGCAGCCGATGGAACGTCGGACCAACTACACATGTCGGGATTTTAC CGAGGCGTACACCCTCTGCTGGGACATGAGCACGCAACGTGCCCCCTTTA ATTGGGCGGATGAGCTCTATCGCGGCTACCTGCATTCTCTGGCTTCTTAT GCGCAGCAGCATGTATGTCGTGGGATGGAGCGGTCGGCCTCAGACGACCA GACCCTCCTCCTGGAGCTCTCCGCTAGGTGGGCGCAGTACAAATGCATGG TCAACGACTATCACCGCGTCTTCATCATCCTTGACCGGTACTACCTGCGC CACAACGGCCTGGTCGCCTTGGGACCTGCGGGGCGGGCCACCTTCTGGCG AGAGGGGTGCAGCCCCTCGGTCCAGCACCGAGTCAAGAAAGCCATCCTTC GAGGCGCAGGTGCAGAGAGGGAGGACAGAAGGGAGGAAAAGAGGGAGGAG GAGGGGAGGGAGGAGTGTGGGAAGAGGTTGAAATTCGGTGCTCTGTCATG TTCGTGCAGCTTTTCCTCCTCTCCTCCCTCCTCTCCCCCCTCCTCCATGT CCTGCCGGCCATGCAGGCAGTGGCGGGAGCAGCAGCAGGAGCAGAGAAAA GAGACAGAGAGGGGGTTAGGAGGTGAGGATAGAGGAGCGGCACCGATCGA GGAACACCTGAGGAGGCCCCTCACTGGTATGGCCCTCGCCGCTCTTGTGG AGATATCACCAGAGGCTGCAAAGGAGGTCGGTGTGAAGCTGAAGAAGGAG CACGGCCTCGATAGCGCCGACGTGCAAGGATGGGAGAAGGTAGGGGAGAA AGGAGGGGGAAAGGGAGCAAAGGGGGTAGGGAAGGAAAGGAAGCAAGGTT AGATGGCCGGACGCCGGAACCCTCCTGAGCCACGGGACTGGGACGAAGGC TTTGCCGCCCTTACAACCTTGTGGACAGAGCCCTGTTTCGCTGCCTACAG CTCACAGCAGCCGATGGAACGTCGGACCAACTACACATGTCGGGATTTTA CCGAGGCGTACACCCTCTGCTGGGACATGAGCACGCAACGTGCCCCCTTT AATTGGGCGGATGAGCTCTATCGCGGCTACCTGCATTCTCTGGCTTCTTA TGCGCAGCAGCATGTATGTCGTGGGATGGAGCGGTCGGCCTCAGACGACC AGACCCTCCTCCTGGAGCTCTCCGCTAGGTGGGCGCAGTACAAATGCATG GTCAACGACTATCACCGCGTCTTCATCATCCTTGACCGGTACTACCTGCG CCACAACGGCCTGGTCGCCTTGGGACCTGCGGGGCGGGCCACCTTCTGGC GAGAGGGGTGCAGCCCCTCGGTCCAGCACCGAGTCAAGAAAGCCATCCTT CGAGGCGCAGGTGCAGAGAGGGAGGACAGAAGGGAGGAAAAGAGGGAGGA GGAGGGGAGGGAGGAGTGTGGGAAGAGGTTGAAATTCGGTGCTCTGTCAT GTTCGTGCAGCTTTTCCTCCTCTCCTCCCTCCTCTCCCCCCTCCTCCATG TCCTGCCGGCCATGCAGGCAGTGGCGGGAGCAGCAGCAGGAGCAGAGAAA AGAGACAGAGAGGGGGTTAGGAGGTGAGGATAGAGGAGCGGCACCGATCG AGGAACACCTGAGGAGGCCCCTCACTGGTATGGCCCTCGCCGCTCTTGTG GAGATATCACCAGAGGCTGCAAAGGAGGTCGGTGTGAAGCTGAAGAAGGA GCACGGCCTCGATAGCGCCGACGTGCAAGGATGGGAGAAGGTAGGGGAGA AAGGAGGGGGAAAGGGAGCAAAGGGGGTAGGGAAGGAAAGGAAGCAAGGT TAGATGGCCGGACGCCGGAACCCTCCTGAGCCACGGGACTGGGACGAAGG CTTTGCCGCCCTTACAACCTTGTGGACAGAGCCCTGTTTCGCTGCCTACA GCTCACAGCAGCCGATGGAACGTCGGACCAACTACACATGTCGGGATTTT ACCGAGGCGTACACCCTCTGCTGGGACATGAGCACGCAACGTGCCCCCTT TAATTGGGCGGATGAGCTCTATCGCGGCTACCTGCATTCTCTGGCTTCTT ATGCGCAGCAGCATGTATGTCGTGGGATGGAGCGGTCGGCCTCAGACGAC CAGACCCTCCTCCTGGAGCTCTCCGCTAGGTGGGCGCAGTACAAATGCAT GGTCAACGACTATCACCGCGTCTTCATCATCCTTGACCGGTACTACCTGC GCCACAACGGCCTGGTCGCCTTGGGACCTGCGGGGCGGGCCACCTTCTGG CGAGAGGGGTGCAGCCCCTCGGTCCAGCACCGAGTCAAGAAAGCCATCCT TCGAGGCGCAGGTGCAGAGAGGGAGGACAGAAGGGAGGAAAAGAGGGAGG AGGAGGGGAGGGAGGAGTGTGGGAAGAGGTTGAAATTCGGTGCTCTGTCA TGTTCGTGCAGCTTTTCCTCCTCTCCTCCCTCCTCTCCCCCCTCCTCCAT GTCCTGCCGGCCATGCAGGCAGTGGCGGGAGCAGCAGCAGGAGCAGAGAA AAGAGACAGAGAGGGGGTTAGGAGGTGAGGATAGAGGAGCGGCACCGATC GAGGAACACCTGAGGAGGCCCCTCACTGGTATGGCCCTCGCCGCTCTTGT GGAGATATCACCAGAGGCTGCAAAGGAGGTCGGTGTGAAGCTGAAGAAGG AGCACGGCCTCGATAGCGCCGACGTGCAAGGATGGGAGAAGGTAGGGGAG AAAGGAGGGGGAAAGGGAGCAAAGGGGGTAGGGAAGGAAAGGAAGCAAGG TTAGATGGCCGGACGCCGGAACCCTCCTGAGCCACGGGACTGGGACGAAG GCTTTGCCGCCCTTACAACCTTGTGGACAGAGCCCTGTTTCGCTGCCTAC AGCTCACAGCAGCCGATGGAACGTCGGACCAACTACACATGTCGGGATTT TACCGAGGCGTACACCCTCTGCTGGGACATGAGCACGCAACGTGCCCCCT TTAATTGGGCGGATGAGCTCTATCGCGGCTACCTGCATTCTCTGGCTTCT TATGCGCAGCAGCATGTATGTCGTGGGATGGAGCGGTCGGCCTCAGACGA CCAGACCCTCCTCCTGGAGCTCTCCGCTAGGTGGGCGCAGTACAAATGCA TGGTCAACGACTATCACCGCGTCTTCATCATCCTTGACCGGTACTACCTG CGCCACAACGGCCTGGTCGCCTTGGGACCTGCGGGGCGGGCCACCTTCTG GCGAGAGGGGTGCAGCCCCTCGGTCCAGCACCGAGTCAAGAAAGCCATCC TTCGAGGCGCAGGTGCAGAGAGGGAGGACAGAAGGGAGGAAAAGAGGGAG GAGGAGGGGAGGGAGGAGTGTGGGAAGAGGTTGAAATTCGGTGCTCTGTC ATGTTCGTGCAGCTTTTCCTCCTCTCCTCCCTCCTCTCCCCCCTCCTCCA TGTCCTGCCGGCCATGCAGGCAGTGGCGGGAGCAGCAGCAGGAGCAGAGA AAAGAGACAGAGAGGGGGTTAGGAGGTGAGGATAGAGGAGCGGCACCGAT CGAGGAACACCTGAGGAGGCCCCTCACTGGTATGGCCCTCGCCGCTCTTG TGGAGATATCACCAGAGGCTGCAAAGGAGGTCGGTGTGAAGCTGAAGAAG GAGCACGGCCTCGATAGCGCCGACGTGCAAGGATGGGAGAAGGTAGGGGA GAAAGGAGGGGGAAAGGGAGCAAAGGGGGTAGGGAAGGAAAGGAAGCAAG GTTAGATGGCCGGACGCCGGAACCCTCCTGAGCCACGGGACTGGGACGAA GGCTTTGCCGCCCTTACAACCTTGTGGACAGAGCCCTGTTTCGCTGCCTA CAGCTCACAGCAGCCGATGGAACGTCGGACCAACTACACATGTCGGGATT TTACCGAGGCGTACACCCTCTGCTGGGACATGAGCACGCAACGTGCCCCC TTTAATTGGGCGGATGAGCTCTATCGCGGCTACCTGCATTCTCTGGCTTC TTATGCGCAGCAGCATGTATGTCGTGGGATGGAGCGGTCGGCCTCAGACG ACCAGACCCTCCTCCTGGAGCTCTCCGCTAGGTGGGCGCAGTACAAATGC ATGGTCAACGACTATCACCGCGTCTTCATCATCCTTGACCGGTACTACCT GCGCCACAACGGCCTGGTCGCCTTGGGACCTGCGGGGCGGGCCACCTTCT GGCGAGAGGGGTGCAGCCCCTCGGTCCAGCACCGAGTCAAGAAAGCCATC CTTCGAGGCGCAGGTGCAGAGAGGGAGGACAGAAGGGAGGAAAAGAGGGA GGAGGAGGGGAGGGAGGAGTGTGGGAAGAGGTTGAAATTCGGTGCTCTGT CATGTTCGTGCAGCTTTTCCTCCTCTCCTCCCTCCTCTCCCCCCTCCTCC ATGTCCTGCCGGCCATGCAGGCAGTGGCGGGAGCAGCAGCAGGAGCAGAG AAAAGAGACAGAGAGGGGGTTAGGAGGTGAGGATAGAGGAGCGGCACCGA TCGAGGAACACCTGAGGAGGCCCCTCACTGGTATGGCCCTCGCCGCTCTT GTGGAGATATCACCAGAGGCTGCAAAGGAGGTCGGTGTGAAGCTGAAGAA GGAGCACGGCCTCGATAGCGCCGACGTGCAAGGATGGGAGAAGGTAGGGG AGAAAGGAGGGGGAAAGGGAGCAAAGGGGGTAGGGAAGGAAAGGAAGCAA GGTTAG back to top
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