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Properties
| Property Name | Value |
|---|
| TranscriptId | 220991 |
| Track | FilteredModels2 |
| ProteinId | 220905 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_28 | supercontig | scaffold_28:232026..233280 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8816 ID=mRNA_8816|Name=jgi.p|Nanoce1779_2|220905|organism=Nannochloropsis oceanica|type=mRNA|length=1023bp
TTCCAGTAACATCAGCAGCGGCGGCGGTAACGGCAATCCAATCTTGCGGC
CCGCGGCACTATCATCATCAGTACCGGCAGATGCTCTTTGGTGGTGGTGA
TGCTGCTGGAAGACTGCAGCCGTGGGATGAGGAGGAGGATGAGGAGGACG
AGAACGAAGAGTACGGCTTGGGTGAGGGTGAGGGACAAGAAGAAGGCATG
TACGAAATGGTGCCATCTTCACCCCAAATAGAGGACGACGATGACGTTTG
TTTGCTCATGGGGCCTGCTGGTGTCAAGCTTCAGAGAAGTGCCGGGGCGG
GAAAAGCAGCAGCTGCAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCACCCGTAAGAGAAGCTACGACTGGGACAGTGACAGCAAAAGACATAGA
GACCAGGGTAGAGATCAATTCTTTAGCGCTACAAAGGAGAGGGAATAAAA
CTGGCGTCGTCGTACCAAGGGCGAAGACGAAGGAGACGAAGGATGAGGGA
GATGAGAGGGAGGAGGTTGGAGCTGCGGGGCACGAGGCGCACGAATGCGT
CATATGCCTGGAGGAATTCACAAGGGAAAATCCGGAGATGAACACACTTT
GCTCTTGCGGGGAGAACCGCGCCCGCTTTCACTACCCCTGTTTGCTGCTT
TACCTGGAGCGAGGTCCACGCGGACGACGAGAAGAGCAGCGGCGAAGGCG
AGGGGAGGAAGAGGGGGAGGGCGGTAACGAGCAGTACCTGTGTCCTACCT
GTCGAGGGCCCTTGTACTGGGAAGAAATGGCATGAAGATTGGCTAGGACG
GAGAGAAATAGAGAAGGAAGTAGGAGATAGGAATTGTATAGGTATGTAAG
CTGATTGTGCAAAAGGGAGGAAGGCCTGGGAAAAGAAGAAGAGGGACGCA
GAGATGAACACAGTGAGTGTGAGAGCGAGTGATGAAGATGAAGATATAAA
GTGATAAAAAGAAAGACAGCAAGAGAGAAAAATGCATGATAGGGAAAAAA
ACGTACACTCAAAGTCTCCACGA back to topprotein sequence of jgi.p|Nanoce1779_2|220905 >mRNA_8816-protein ID=mRNA_8816-protein|Name=jgi.p|Nanoce1779_2|220905|organism=Nannochloropsis oceanica|type=polypeptide|length=235bp
MLFGGGDAAGRLQPWDEEEDEEDENEEYGLGEGEGQEEGMYEMVPSSPQI
EDDDDVCLLMGPAGVKLQRSAGAGKAAAAEAAAAAAAAAAAPVREATTGT
VTAKDIETRVEINSLALQRRGNKTGVVVPRAKTKETKDEGDEREEVGAAG
HEAHECVICLEEFTRENPEMNTLCSCGENRARFHYPCLLLYLERGPRGRR
EEQRRRRGEEEGEGGNEQYLCPTCRGPLYWEEMA* back to topmRNA from alignment at scaffold_28:232026..233280- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8816 ID=mRNA_8816|Name=jgi.p|Nanoce1779_2|220905|organism=Nannochloropsis oceanica|type=mRNA|length=1255bp|location=Sequence derived from alignment at scaffold_28:232026..233280- (Nannochloropsis oceanica)
TTCCAGTAACATCAGCAGCGGCGGCGGTAACGGCAATCCAATCTTGCGGC
CCGCGGCACTATCATCATCAGGTGGGATCAGGAGAGAAAGTATGAGCCGG
GAAAAGAGGAGAAGCAGAAGGAAGAGGACCTGCATGGAGCACTTGCAAAT
GTTGTGTTGCTGTCTCCATTCCCTTATACCTCGCCAGTACCGGCAGATGC
TCTTTGGTGGTGGTGATGCTGCTGGAAGACTGCAGCCGTGGGATGAGGAG
GAGGATGAGGAGGACGAGAACGAAGAGTACGGCTTGGGTGAGGGTGAGGG
ACAAGAAGAAGGCATGTACGAAATGGTGCCATCTTCACCCCAAATAGAGG
ACGACGATGACGTTTGTTTGCTCATGGGGCCTGCTGGTGTCAAGCTTCAG
AGAAGTGCCGGGGCGGGAAAAGCAGCAGCTGCAGAAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCACCCGTAAGAGAAGCTACGACTGGGACAGTGA
CAGCAAAAGACATAGAGACCAGGGTAGAGATCAATTCTTTAGCGCTACAA
AGGAGAGGGAATAAAACTGGCGTCGTCGTACCAAGGGCGAAGACGAAGGA
GACGAAGGATGAGGGAGATGAGAGGGAGGAGGTTGGAGCTGCGGGGCACG
AGGCGCACGAATGCGTCATATGCCTGGAGGAATTCACAAGGGAAAATCCG
GAGATGAACACACGTAAGGATACGAAGGGGATGAAAAAAGGGAGCAGGAG
GAATGTTTAGGAAGGAGACGCTCTCGTTTTCCCTCCCTCTTACTCACCAC
TCCTCTCATTTTCGCTCACGTACACACAGTTTGCTCTTGCGGGGAGAACC
GCGCCCGCTTTCACTACCCCTGTTTGCTGCTTTACCTGGAGCGAGGTCCA
CGCGGACGACGAGAAGAGCAGCGGCGAAGGCGAGGGGAGGAAGAGGGGGA
GGGCGGTAACGAGCAGTACCTGTGTCCTACCTGTCGAGGGCCCTTGTACT
GGGAAGAAATGGCATGAAGATTGGCTAGGACGGAGAGAAATAGAGAAGGA
AGTAGGAGATAGGAATTGTATAGGTATGTAAGCTGATTGTGCAAAAGGGA
GGAAGGCCTGGGAAAAGAAGAAGAGGGACGCAGAGATGAACACAGTGAGT
GTGAGAGCGAGTGATGAAGATGAAGATATAAAGTGATAAAAAGAAAGACA
GCAAGAGAGAAAAATGCATGATAGGGAAAAAAACGTACACTCAAAGTCTC
CACGA back to topCoding sequence (CDS) from alignment at scaffold_28:232026..233280- >mRNA_8816 ID=mRNA_8816|Name=jgi.p|Nanoce1779_2|220905|organism=Nannochloropsis oceanica|type=CDS|length=1410bp|location=Sequence derived from alignment at scaffold_28:232026..233280- (Nannochloropsis oceanica)
TTTGCTCTTGCGGGGAGAACCGCGCCCGCTTTCACTACCCCTGTTTGCTG
CTTTACCTGGAGCGAGGTCCACGCGGACGACGAGAAGAGCAGCGGCGAAG
GCGAGGGGAGGAAGAGGGGGAGGGCGGTAACGAGCAGTACCTGTGTCCTA
CCTGTCGAGGGCCCTTGTACTGGGAAGAAATGGCATGAATGCTCTTTGGT
GGTGGTGATGCTGCTGGAAGACTGCAGCCGTGGGATGAGGAGGAGGATGA
GGAGGACGAGAACGAAGAGTACGGCTTGGGTGAGGGTGAGGGACAAGAAG
AAGGCATGTACGAAATGGTGCCATCTTCACCCCAAATAGAGGACGACGAT
GACGTTTGTTTGCTCATGGGGCCTGCTGGTGTCAAGCTTCAGAGAAGTGC
CGGGGCGGGAAAAGCAGCAGCTGCAGAAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCACCCGTAAGAGAAGCTACGACTGGGACAGTGACAGCAAAA
GACATAGAGACCAGGGTAGAGATCAATTCTTTAGCGCTACAAAGGAGAGG
GAATAAAACTGGCGTCGTCGTACCAAGGGCGAAGACGAAGGAGACGAAGG
ATGAGGGAGATGAGAGGGAGGAGGTTGGAGCTGCGGGGCACGAGGCGCAC
GAATGCGTCATATGCCTGGAGGAATTCACAAGGGAAAATCCGGAGATGAA
CACACTTTGCTCTTGCGGGGAGAACCGCGCCCGCTTTCACTACCCCTGTT
TGCTGCTTTACCTGGAGCGAGGTCCACGCGGACGACGAGAAGAGCAGCGG
CGAAGGCGAGGGGAGGAAGAGGGGGAGGGCGGTAACGAGCAGTACCTGTG
TCCTACCTGTCGAGGGCCCTTGTACTGGGAAGAAATGGCATGAATGCTCT
TTGGTGGTGGTGATGCTGCTGGAAGACTGCAGCCGTGGGATGAGGAGGAG
GATGAGGAGGACGAGAACGAAGAGTACGGCTTGGGTGAGGGTGAGGGACA
AGAAGAAGGCATGTACGAAATGGTGCCATCTTCACCCCAAATAGAGGACG
ACGATGACGTTTGTTTGCTCATGGGGCCTGCTGGTGTCAAGCTTCAGAGA
AGTGCCGGGGCGGGAAAAGCAGCAGCTGCAGAAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCACCCGTAAGAGAAGCTACGACTGGGACAGTGACAG
CAAAAGACATAGAGACCAGGGTAGAGATCAATTCTTTAGCGCTACAAAGG
AGAGGGAATAAAACTGGCGTCGTCGTACCAAGGGCGAAGACGAAGGAGAC
GAAGGATGAGGGAGATGAGAGGGAGGAGGTTGGAGCTGCGGGGCACGAGG
CGCACGAATGCGTCATATGCCTGGAGGAATTCACAAGGGAAAATCCGGAG
ATGAACACAC back to top
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