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Properties
| Property Name | Value |
|---|
| TranscriptId | 673792 |
| Track | FilteredModels2 |
| ProteinId | 673706 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_28 | supercontig | scaffold_28:229367..231345 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8814 ID=mRNA_8814|Name=jgi.p|Nanoce1779_2|673706|organism=Nannochloropsis oceanica|type=mRNA|length=696bp
CACAGGAACGGCTGACACATCACAAACACAAGCAGCAGCAATGTCCAGTG
GCGGTCCCGGTCAGGATACTAGCAGCGGTGACAAGAAATTGATGGAAGTG
GGCGTCAAAGCTGGGGAGGCTCAGAGTTGCAAGGCCTCCCAGAATGAGCT
GGTGGGAGCTGCAGCAGCGGGTGCTACCGTCGGCATGATGATTGCAGGTC
CCGTCGTGGCGGTCGCGGGCGGGATAGTGGCTGGCATGATGGCTGCCAAC
AACGAAGGCCAGGGGGGCGAGGTGGCTCGGGCGACTGGTCGGGCGGCGAG
CACCGCATTTGAAAGTGCCAAAGCTTTCGACAAGGAGCATCATATGACTG
AGAAGCTGAAGGATGCGGCGGCCAAGACGATGGCTAAGGCCCAGGCGCTG
GACAAGGAGTTTCATATCGTGGACAAGGTGAAAGAAAGCACGGGCAAGGC
GATGAGCCAGGCCAAGAGGATGGACGAGGAACATCACATCACTCAAAAAC
TGTCGGCAGGCCTGGTAAAGGGTCTTGACAACGTGACGAAAGCCATGACC
GGTGGAAAGGAGAAGCGAGGCGGCACCGACGGTGAAGGGAAGCATGCGTA
GAGGGAGGGGGCGAGGGAGGGTTCGGAGTATGATGTAGAACGCGAGGATG
ATTTAGAAGAAATGAAGAGGGAGGGAGGGAGGGAGGGGAAAGAGTG back to topprotein sequence of jgi.p|Nanoce1779_2|673706 >mRNA_8814-protein ID=mRNA_8814-protein|Name=jgi.p|Nanoce1779_2|673706|organism=Nannochloropsis oceanica|type=polypeptide|length=187bp
MSSGGPGQDTSSGDKKLMEVGVKAGEAQSCKASQNELVGAAAAGATVGMM
IAGPVVAVAGGIVAGMMAANNEGQGGEVARATGRAASTAFESAKAFDKEH
HMTEKLKDAAAKTMAKAQALDKEFHIVDKVKESTGKAMSQAKRMDEEHHI
TQKLSAGLVKGLDNVTKAMTGGKEKRGGTDGEGKHA* back to topmRNA from alignment at scaffold_28:229367..231345- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8814 ID=mRNA_8814|Name=jgi.p|Nanoce1779_2|673706|organism=Nannochloropsis oceanica|type=mRNA|length=1979bp|location=Sequence derived from alignment at scaffold_28:229367..231345- (Nannochloropsis oceanica)
CACAGGAACGGCTGACACATCACAAACACAAGCAGCAGCAATGTCCAGTG
GCGGTCCCGGTCAGGATACTAGCAGCGGTGACAAGAAATTGATGGAAGTG
GGCGTCAAAGGTGAGGACCGAGAACCTTGACGACACGCGTCTGCCTCGCT
GGGGGTTACAGACCTTCTTCTTGATGTAAGGCCATATCGTTAGACCAACA
CAGCATGCTGTGCAAAGTGTCACATCCCTTGTTTGGAACGGGCCCCAGTG
CGGGCACACGTGAGGCATTTTATTGATTGAGTGGTCTCCTATCCCTCCCT
CTCTCCCGCCCTCCCCTCTGTTATGCGCCATATCTCCTTCCTCAAGTCTC
TCGTCGTCTCTCTTCCCGTACACACGAACGATGTGGCAGCTGGGGAGGCT
CAGAGTTGCAAGGCCTCCCAGAATGAGCTGGTGGGAGCTGCAGCAGCGGG
TGCTACCGTCGGTAAGCAAGCTTCAGTCAGATGGCAGGGAGGGGAACGCC
CCCCGTACTTTTACTGCTCCTCTCGACATCCCATATGTCGCCCTTACCCT
TAATGTATTCACTTGTCTTGTCCTATCGTTTCTTGGTAGGCATGATGATT
GCAGGTCCCGTCGTGGCGGTCGCGGGCGGGATAGTGGCTGGCATGATGGC
TGCCAACAACGAAGGCCAGGGGGGCGAGGTAGGGAAGGAGGGAGGGAAGG
AGGAAAGGAGCAAGAAAGGGACTTTAGCTTGTCTTCAAGGACTGACTGTT
TCAATAATCCGCTTGGTCATTAGGTGGCTCGGGCGACTGGTCGGGCGGCG
AGCACCGCATTTGAAAGTGCCAAAGCTTTCGACAAGGAGCATCATGTAAG
GAATGAGAGGCTGGGAGGGAAGAGAAGAGGAACGATGAGAGAGCTGGGAG
TCATAAGACACTGTCTTAGCATGCTGTTGTGTTGGCTGGTCTATCAATCT
AGATGGCCGAAGGGCTGAAGAGAGAAACGGAAGCGAGAGTGTGCGGGGCC
GGCAGAGGAGGAGGCCACGGGGGACGTGACCGGCATTAAGCAGCTGTAGT
CCCTCCGATGAGGCATGTGGACAGTCACTCCCACTCCTCTTCCTGATTGC
ACCCTCTCACTTTCATTTTATCCAAACACAAATAGATGACTGAGAAGCTG
AAGGATGCGGCGGCCAAGACGATGGCTAAGGCCCAGGCGCTGGACAAGGA
GTTTCATGTATGCTGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAATGA
GGGAGTGTAGGAGAGGGAGGGAGGGAGGGAGGGAGTTGTAGGAGAGGGAG
GGAGGGAATGAGGGAGTTGTAGGAGAGGGAGGAAGGGAATGAGGGAGTTG
TAGGAGAGAAAAAAGAGAGATAAAGAAGATTTTTGCCTTACTCGCCCTCT
CTCCCACTCCTCCTCCCTCCCTCCCTCCCTCCCCTCCTCTCCATCCCCCA
AACCCAGATCGTGGACAAGGTGAAAGAAAGCACGGGCAAGGCGATGAGCC
AGGCCAAGAGGATGGACGAGGAACATCACATCACTCAAAAACTGTCGGCA
GGTAGGGGGGGAGGGAGAGAGGGAGGGATGAAAGGAAAAAGAACATGTTG
GTTATACTCGTACATGCGCATATCCATCTGTCAGCTCGCTTTCCCTGATA
TCAAATTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCTAGGCCTGGTA
AAGGGTCTTGACAACGTGACGAAAGCCATGACCGGTGGAAAGGAGAAGCG
AGGCGGCACCGACGGTGAAGGGAAGCATGCGTAGAGGGAGGGGGCGAGGG
AGGGTTCGGAGTATGATGTAGAACGCGAGGATGATTTAGAAGAAATGAAG
AGGGAGGGAGGGAGGGAGGGGAAAGAGTG back to topCoding sequence (CDS) from alignment at scaffold_28:229367..231345- >mRNA_8814 ID=mRNA_8814|Name=jgi.p|Nanoce1779_2|673706|organism=Nannochloropsis oceanica|type=CDS|length=3927bp|location=Sequence derived from alignment at scaffold_28:229367..231345- (Nannochloropsis oceanica)
GCCTGGTAAAGGGTCTTGACAACGTGACGAAAGCCATGACCGGTGGAAAG
GAGAAGCGAGGCGGCACCGACGGTGAAGGGAAGCATGCGTAGATCGTGGA
CAAGGTGAAAGAAAGCACGGGCAAGGCGATGAGCCAGGCCAAGAGGATGG
ACGAGGAACATCACATCACTCAAAAACTGTCGGCAGATGACTGAGAAGCT
GAAGGATGCGGCGGCCAAGACGATGGCTAAGGCCCAGGCGCTGGACAAGG
AGTTTCATGTGGCTCGGGCGACTGGTCGGGCGGCGAGCACCGCATTTGAA
AGTGCCAAAGCTTTCGACAAGGAGCATCATGCATGATGATTGCAGGTCCC
GTCGTGGCGGTCGCGGGCGGGATAGTGGCTGGCATGATGGCTGCCAACAA
CGAAGGCCAGGGGGGCGAGCTGGGGAGGCTCAGAGTTGCAAGGCCTCCCA
GAATGAGCTGGTGGGAGCTGCAGCAGCGGGTGCTACCGTCGATGTCCAGT
GGCGGTCCCGGTCAGGATACTAGCAGCGGTGACAAGAAATTGATGGAAGT
GGGCGTCAAAGGCCTGGTAAAGGGTCTTGACAACGTGACGAAAGCCATGA
CCGGTGGAAAGGAGAAGCGAGGCGGCACCGACGGTGAAGGGAAGCATGCG
TAGATCGTGGACAAGGTGAAAGAAAGCACGGGCAAGGCGATGAGCCAGGC
CAAGAGGATGGACGAGGAACATCACATCACTCAAAAACTGTCGGCAGATG
ACTGAGAAGCTGAAGGATGCGGCGGCCAAGACGATGGCTAAGGCCCAGGC
GCTGGACAAGGAGTTTCATGTGGCTCGGGCGACTGGTCGGGCGGCGAGCA
CCGCATTTGAAAGTGCCAAAGCTTTCGACAAGGAGCATCATGCATGATGA
TTGCAGGTCCCGTCGTGGCGGTCGCGGGCGGGATAGTGGCTGGCATGATG
GCTGCCAACAACGAAGGCCAGGGGGGCGAGCTGGGGAGGCTCAGAGTTGC
AAGGCCTCCCAGAATGAGCTGGTGGGAGCTGCAGCAGCGGGTGCTACCGT
CGATGTCCAGTGGCGGTCCCGGTCAGGATACTAGCAGCGGTGACAAGAAA
TTGATGGAAGTGGGCGTCAAAGGCCTGGTAAAGGGTCTTGACAACGTGAC
GAAAGCCATGACCGGTGGAAAGGAGAAGCGAGGCGGCACCGACGGTGAAG
GGAAGCATGCGTAGATCGTGGACAAGGTGAAAGAAAGCACGGGCAAGGCG
ATGAGCCAGGCCAAGAGGATGGACGAGGAACATCACATCACTCAAAAACT
GTCGGCAGATGACTGAGAAGCTGAAGGATGCGGCGGCCAAGACGATGGCT
AAGGCCCAGGCGCTGGACAAGGAGTTTCATGTGGCTCGGGCGACTGGTCG
GGCGGCGAGCACCGCATTTGAAAGTGCCAAAGCTTTCGACAAGGAGCATC
ATGCATGATGATTGCAGGTCCCGTCGTGGCGGTCGCGGGCGGGATAGTGG
CTGGCATGATGGCTGCCAACAACGAAGGCCAGGGGGGCGAGCTGGGGAGG
CTCAGAGTTGCAAGGCCTCCCAGAATGAGCTGGTGGGAGCTGCAGCAGCG
GGTGCTACCGTCGATGTCCAGTGGCGGTCCCGGTCAGGATACTAGCAGCG
GTGACAAGAAATTGATGGAAGTGGGCGTCAAAGGCCTGGTAAAGGGTCTT
GACAACGTGACGAAAGCCATGACCGGTGGAAAGGAGAAGCGAGGCGGCAC
CGACGGTGAAGGGAAGCATGCGTAGATCGTGGACAAGGTGAAAGAAAGCA
CGGGCAAGGCGATGAGCCAGGCCAAGAGGATGGACGAGGAACATCACATC
ACTCAAAAACTGTCGGCAGATGACTGAGAAGCTGAAGGATGCGGCGGCCA
AGACGATGGCTAAGGCCCAGGCGCTGGACAAGGAGTTTCATGTGGCTCGG
GCGACTGGTCGGGCGGCGAGCACCGCATTTGAAAGTGCCAAAGCTTTCGA
CAAGGAGCATCATGCATGATGATTGCAGGTCCCGTCGTGGCGGTCGCGGG
CGGGATAGTGGCTGGCATGATGGCTGCCAACAACGAAGGCCAGGGGGGCG
AGCTGGGGAGGCTCAGAGTTGCAAGGCCTCCCAGAATGAGCTGGTGGGAG
CTGCAGCAGCGGGTGCTACCGTCGATGTCCAGTGGCGGTCCCGGTCAGGA
TACTAGCAGCGGTGACAAGAAATTGATGGAAGTGGGCGTCAAAGGCCTGG
TAAAGGGTCTTGACAACGTGACGAAAGCCATGACCGGTGGAAAGGAGAAG
CGAGGCGGCACCGACGGTGAAGGGAAGCATGCGTAGATCGTGGACAAGGT
GAAAGAAAGCACGGGCAAGGCGATGAGCCAGGCCAAGAGGATGGACGAGG
AACATCACATCACTCAAAAACTGTCGGCAGATGACTGAGAAGCTGAAGGA
TGCGGCGGCCAAGACGATGGCTAAGGCCCAGGCGCTGGACAAGGAGTTTC
ATGTGGCTCGGGCGACTGGTCGGGCGGCGAGCACCGCATTTGAAAGTGCC
AAAGCTTTCGACAAGGAGCATCATGCATGATGATTGCAGGTCCCGTCGTG
GCGGTCGCGGGCGGGATAGTGGCTGGCATGATGGCTGCCAACAACGAAGG
CCAGGGGGGCGAGCTGGGGAGGCTCAGAGTTGCAAGGCCTCCCAGAATGA
GCTGGTGGGAGCTGCAGCAGCGGGTGCTACCGTCGATGTCCAGTGGCGGT
CCCGGTCAGGATACTAGCAGCGGTGACAAGAAATTGATGGAAGTGGGCGT
CAAAGGCCTGGTAAAGGGTCTTGACAACGTGACGAAAGCCATGACCGGTG
GAAAGGAGAAGCGAGGCGGCACCGACGGTGAAGGGAAGCATGCGTAGATC
GTGGACAAGGTGAAAGAAAGCACGGGCAAGGCGATGAGCCAGGCCAAGAG
GATGGACGAGGAACATCACATCACTCAAAAACTGTCGGCAGATGACTGAG
AAGCTGAAGGATGCGGCGGCCAAGACGATGGCTAAGGCCCAGGCGCTGGA
CAAGGAGTTTCATGTGGCTCGGGCGACTGGTCGGGCGGCGAGCACCGCAT
TTGAAAGTGCCAAAGCTTTCGACAAGGAGCATCATGCATGATGATTGCAG
GTCCCGTCGTGGCGGTCGCGGGCGGGATAGTGGCTGGCATGATGGCTGCC
AACAACGAAGGCCAGGGGGGCGAGCTGGGGAGGCTCAGAGTTGCAAGGCC
TCCCAGAATGAGCTGGTGGGAGCTGCAGCAGCGGGTGCTACCGTCGATGT
CCAGTGGCGGTCCCGGTCAGGATACTAGCAGCGGTGACAAGAAATTGATG
GAAGTGGGCGTCAAAGGCCTGGTAAAGGGTCTTGACAACGTGACGAAAGC
CATGACCGGTGGAAAGGAGAAGCGAGGCGGCACCGACGGTGAAGGGAAGC
ATGCGTAGATCGTGGACAAGGTGAAAGAAAGCACGGGCAAGGCGATGAGC
CAGGCCAAGAGGATGGACGAGGAACATCACATCACTCAAAAACTGTCGGC
AGATGACTGAGAAGCTGAAGGATGCGGCGGCCAAGACGATGGCTAAGGCC
CAGGCGCTGGACAAGGAGTTTCATGTGGCTCGGGCGACTGGTCGGGCGGC
GAGCACCGCATTTGAAAGTGCCAAAGCTTTCGACAAGGAGCATCATGCAT
GATGATTGCAGGTCCCGTCGTGGCGGTCGCGGGCGGGATAGTGGCTGGCA
TGATGGCTGCCAACAACGAAGGCCAGGGGGGCGAGCTGGGGAGGCTCAGA
GTTGCAAGGCCTCCCAGAATGAGCTGGTGGGAGCTGCAGCAGCGGGTGCT
ACCGTCGATGTCCAGTGGCGGTCCCGGTCAGGATACTAGCAGCGGTGACA
AGAAATTGATGGAAGTGGGCGTCAAAG back to top
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