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Properties
Property Name | Value |
TranscriptId | 604059 |
Track | FilteredModels2 |
ProteinId | 603973 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_28 | supercontig | scaffold_28:124406..126547 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8779 ID=mRNA_8779|Name=jgi.p|Nanoce1779_2|603973|organism=Nannochloropsis oceanica|type=mRNA|length=1669bp GATGCTCTGGTGGTGTCGCTGGAGAGACGGAAGAAGGGGGGGCAGAAGGC CTGGGAGGGATGGAAGGAGGGATGGAGGGAGGGATGGAGGGAGGGGATGG GGATGGTGGAGGGCAGGGTGCAGGAGGTGAGGGAAAGATGGAGGGAGGGC ATACATGCAGCGGTAGCCACGGTGGAGGGAATGAGGGAGGGAGTGAGGGA GAGGCAGCAGTCTTGGGAGGGGTGGAGGGAGGGGGTAAATTCCAAGGCCT GCGCCTGGGCTGGCCGTTACATTGACTTGGCACAGGCGGGGGGAGAGGAC GAGGGGGAGGAAGGAGAGGATGGGATGGAGGGAGGGATGCAGAAGGGGGA GCACGGGAAGGGGGGAAAGGTGCGGGTGTTGTCGTCGCTTTTGGTGGGGA AGAGGCGAAGGAGCCTTGGGGCAGCATCGAGCAACGAGATGAAGAGAGCG AAGGCGGCGAAAAATGAGTTCAGGAAGAAAGAGGGAGGGGGGGAGGGAGC GCTGAGGCTGATGAGGGGAGATCCGTTGGTGATTGACTCTTGGAATGAGC GCGCGTTGAGGCATGTGCTGCACCTGGGAGAGGAGATGGAGGGTTGGGAG CACGTCACAACTTCGGAGAACGTGTGTGTCTACCGCAAGTACCTTCCGAC CTCTTCCTCCCCTCCCTCCTCCTCCCCCTCGGCCACCGCCACCACCTTCT GCTCCTCTGCCGGCTGTTGCATGATAGACGAGCATGGCATCCTGACCTCC CCCTCCTCCTCCCTATCCACCTTACCCCCTTCCTCCACTCCCGCCGTGTG GAAGGAGGAGGGCAGGGGGAGGTTTGCTTGCGTGAAGGCTGTGGGCGTGG TGGACGCCCCGGTGAAGCGAGTCTTCGAGCTCTTCATGGACAACACGAGG GTGGCCGAGTACAACGAGCACTGCCGCGAGATCGAGGATATTGACACCTT GTCGGCCAATACCAAAGTCACCTGGTCGGCCTCTGGGCGCTACGGACCTT TTAAAGCAAGGGACTTCTGCACGGTTGTGCATTACCGCCACATGGACGAC GGCAGTTTGGTGGTTGTTAACAGAGCGGCCGAGCACGTCCGAGCGCCGCG GAGCGAGAAGTACGTCCGCTCGGAGATTCTTCTGGCCGGGAATATCATGC GCCCTCACCCTTCTGACCCGAATAAGACTTTGCTCGTGACTTTAACCCAC ATCAACCCAGGTGGCTCCATTGATAGTAAAGCAGGCACGTAGACCCTATC CCCCTCTCTTTCTCCTCCCTTCCTGACTTTCTTCCTTCCCTGTCCATCGG GCCTGTCGTCGTCTGGCCTCTCTCTTTGTCTCTCCCTCCCTATCACTCTC TCTCTCACACCTCTTCCTTCCTGCGGTTTATCGCCTGTCCTCCGGCAGCA TCCGTTTATTTCTCGTCCGCGCATGCCTCGCCCTGCCCAACCCGACTCAC CCCTCCCTCCTCCCTCCCTCCCTCTAGGCGCCGTGATGCTCAACAAGCTC TCCTCCACCAGCCCCGTGTCCTTCATCCGGAAAATTGAAGTGGCCGCGCG CAAGGGGATGGATGGGGTAGTCACGGGAGAGGGGGAGGGAGGGAGGGAGG GGTGGAGGGTCCCCTGGGGAGGGTGGAGGAGGAGAGGGAGGAAGGGGGAG ATGATTGACCCGGCGGAGG back to topprotein sequence of jgi.p|Nanoce1779_2|603973 >mRNA_8779-protein ID=mRNA_8779-protein|Name=jgi.p|Nanoce1779_2|603973|organism=Nannochloropsis oceanica|type=polypeptide|length=382bp MGMVEGRVQEVRERWREGIHAAVATVEGMREGVRERQQSWEGWREGVNSK ACAWAGRYIDLAQAGGEDEGEEGEDGMEGGMQKGEHGKGGKVRVLSSLLV GKRRRSLGAASSNEMKRAKAAKNEFRKKEGGGEGALRLMRGDPLVIDSWN ERALRHVLHLGEEMEGWEHVTTSENVCVYRKYLPTSSSPPSSSPSATATT FCSSAGCCMIDEHGILTSPSSSLSTLPPSSTPAVWKEEGRGRFACVKAVG VVDAPVKRVFELFMDNTRVAEYNEHCREIEDIDTLSANTKVTWSASGRYG PFKARDFCTVVHYRHMDDGSLVVVNRAAEHVRAPRSEKYVRSEILLAGNI MRPHPSDPNKTLLVTLTHINPGGSIDSKAGT* back to topmRNA from alignment at scaffold_28:124406..126547+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8779 ID=mRNA_8779|Name=jgi.p|Nanoce1779_2|603973|organism=Nannochloropsis oceanica|type=mRNA|length=2142bp|location=Sequence derived from alignment at scaffold_28:124406..126547+ (Nannochloropsis oceanica) GATGCTCTGGTGGTGTCGCTGGAGAGACGGAAGAAGGGGGGGCAGAAGGC
CTGGGAGGGATGGAAGGAGGGATGGAGGGAGGGATGGAGGGAGGGGATGG
GGATGGTGGAGGGCAGGGTGCAGGAGGTGAGGGAAAGATGGAGGGAGGGC
ATACATGCAGCGGTAGCCACGGTGGAGGGAATGAGGGAGGGAGTGAGGGA
GAGGCAGCAGTCTTGGGAGGGGTGGAGGGAGGGGGTAAATTCCAAGGCCT
GCGCCTGGGCTGGCCGTTACATTGACTTGGCACAGGCGGGGGGAGAGGAC
GAGGGGGAGGAAGGAGAGGATGGGATGGAGGGAGGGATGCAGAAGGGGGA
GCACGGGAAGGGGGGAAAGGTGCGGGTGTTGTCGTCGCTTTTGGTGGGGA
AGAGGCGAAGGAGCCTTGGGGCAGCATCGAGCAACGAGATGAAGAGAGCG
AAGGCGGCGAAAAATGAGTTCAGGAAGAAAGAGGGAGGGGGGGAGGGAGC
GCTGAGGCTGATGAGGGGAGATCCGTTGGTGATTGACTCTTGGAATGAGC
GCGCGTTGAGGCATGTGCTGCACCTGGGAGAGGAGATGGAGGTAGGGAAT
GAGGGAGGGACGGAGAGAGGGAGGGAAGGAGGGAAAATATAGAAAAGATT
TCGGCATACGCTTTCTCGTCTGATTCTACCGTATGACACGTAATTCCCTC
TCCCCCTCCCTCCCCCCCTCCCTACGTCAGGGTTGGGAGCACGTCACAAC
TTCGGAGAACGTGTGTGTCTACCGCAAGTACCTTCCGACCTCTTCCTCCC
CTCCCTCCTCCTCCCCCTCGGCCACCGCCACCACCTTCTGCTCCTCTGCC
GGCTGTTGCATGATAGACGAGCATGGCATCCTGACCTCCCCCTCCTCCTC
CCTATCCACCTTACCCCCTTCCTCCACTCCCGCCGTGTGGAAGGAGGAGG
GCAGGGGGAGGTTTGCTTGCGTGAAGGCTGTGGGCGTGGTGGACGCCCCG
GTGAAGCGAGTCTTCGAGCTCTTCATGGACAACACGAGGGTGGCCGAGTA
CAACGAGCACTGCCGGTATGCAGAGAGGGAGGGAGGAAGGGCGGCTGTTC
GCGTGGCGTGCTATGCGTTACTCAACCCCCTGTTGGTCCTTTTTCCTTCT
TTCCCTCCTTCCCTCCCCATCACAGCGAGATCGAGGATATTGACACCTTG
TCGGCCAATACCAAAGTCACCTGGTCGGCCTCTGGGCGCTACGGACCTTT
TAAAGCAAGGTATGCCCTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCACATACCACTTCACTAACTCTTTTTCCCTCCCTCCCTTCCTCCCTCCC
TCCCTCCCCCCCTCCCTCCTTTCCAGGGACTTCTGCACGGTTGTGCATTA
CCGCCACATGGACGACGGCAGTTTGGTGGTTGTTAACAGAGCGGCCGAGC
ACGTCCGAGCGCCGCGGAGCGAGAAGTAAGTAAGTAAAGAGGGAGGGAGG
GAAGGAGGGAGGGAGGGAAGGAAAAAGGAAAAGTTGATTTGTCACATGAC
AATATTTCAATATACCCGCCCTAATTTCCTAGGTACGTCCGCTCGGAGAT
TCTTCTGGCCGGGAATATCATGCGCCCTCACCCTTCTGACCCGAATAAGA
CTTTGCTCGTGACTTTAACCCACATCAACCCAGGTGGCTCCATTGATAGT
AAAGCAGGCACGTAGACCCTATCCCCCTCTCTTTCTCCTCCCTTCCTGAC
TTTCTTCCTTCCCTGTCCATCGGGCCTGTCGTCGTCTGGCCTCTCTCTTT
GTCTCTCCCTCCCTATCACTCTCTCTCTCACACCTCTTCCTTCCTGCGGT
TTATCGCCTGTCCTCCGGCAGCATCCGTTTATTTCTCGTCCGCGCATGCC
TCGCCCTGCCCAACCCGACTCACCCCTCCCTCCTCCCTCCCTCCCTCTAG
GCGCCGTGATGCTCAACAAGCTCTCCTCCACCAGCCCCGTGTCCTTCATC
CGGAAAATTGAAGTGGCCGCGCGCAAGGGGATGGATGGGGTAGTCACGGG
AGAGGGGGAGGGAGGGAGGGAGGGGTGGAGGGTCCCCTGGGGAGGGTGGA
GGAGGAGAGGGAGGAAGGGGGAGATGATTGACCCGGCGGAGG back to topCoding sequence (CDS) from alignment at scaffold_28:124406..126547+ >mRNA_8779 ID=mRNA_8779|Name=jgi.p|Nanoce1779_2|603973|organism=Nannochloropsis oceanica|type=CDS|length=5730bp|location=Sequence derived from alignment at scaffold_28:124406..126547+ (Nannochloropsis oceanica) ATGGGGATGGTGGAGGGCAGGGTGCAGGAGGTGAGGGAAAGATGGAGGGA GGGCATACATGCAGCGGTAGCCACGGTGGAGGGAATGAGGGAGGGAGTGA GGGAGAGGCAGCAGTCTTGGGAGGGGTGGAGGGAGGGGGTAAATTCCAAG GCCTGCGCCTGGGCTGGCCGTTACATTGACTTGGCACAGGCGGGGGGAGA GGACGAGGGGGAGGAAGGAGAGGATGGGATGGAGGGAGGGATGCAGAAGG GGGAGCACGGGAAGGGGGGAAAGGTGCGGGTGTTGTCGTCGCTTTTGGTG GGGAAGAGGCGAAGGAGCCTTGGGGCAGCATCGAGCAACGAGATGAAGAG AGCGAAGGCGGCGAAAAATGAGTTCAGGAAGAAAGAGGGAGGGGGGGAGG GAGCGCTGAGGCTGATGAGGGGAGATCCGTTGGTGATTGACTCTTGGAAT GAGCGCGCGTTGAGGCATGTGCTGCACCTGGGAGAGGAGATGGAGGGTTG GGAGCACGTCACAACTTCGGAGAACGTGTGTGTCTACCGCAAGTACCTTC CGACCTCTTCCTCCCCTCCCTCCTCCTCCCCCTCGGCCACCGCCACCACC TTCTGCTCCTCTGCCGGCTGTTGCATGATAGACGAGCATGGCATCCTGAC CTCCCCCTCCTCCTCCCTATCCACCTTACCCCCTTCCTCCACTCCCGCCG TGTGGAAGGAGGAGGGCAGGGGGAGGTTTGCTTGCGTGAAGGCTGTGGGC GTGGTGGACGCCCCGGTGAAGCGAGTCTTCGAGCTCTTCATGGACAACAC GAGGGTGGCCGAGTACAACGAGCACTGCCGCGAGATCGAGGATATTGACA CCTTGTCGGCCAATACCAAAGTCACCTGGTCGGCCTCTGGGCGCTACGGA CCTTTTAAAGCAAGGGACTTCTGCACGGTTGTGCATTACCGCCACATGGA CGACGGCAGTTTGGTGGTTGTTAACAGAGCGGCCGAGCACGTCCGAGCGC CGCGGAGCGAGAAGTACGTCCGCTCGGAGATTCTTCTGGCCGGGAATATC ATGCGCCCTCACCCTTCTGACCCGAATAAGACTTTGCTCGTGACTTTAAC CCACATCAACCCAGGTGGCTCCATTGATAGTAAAGCAGGCACGTAGATGG GGATGGTGGAGGGCAGGGTGCAGGAGGTGAGGGAAAGATGGAGGGAGGGC ATACATGCAGCGGTAGCCACGGTGGAGGGAATGAGGGAGGGAGTGAGGGA GAGGCAGCAGTCTTGGGAGGGGTGGAGGGAGGGGGTAAATTCCAAGGCCT GCGCCTGGGCTGGCCGTTACATTGACTTGGCACAGGCGGGGGGAGAGGAC GAGGGGGAGGAAGGAGAGGATGGGATGGAGGGAGGGATGCAGAAGGGGGA GCACGGGAAGGGGGGAAAGGTGCGGGTGTTGTCGTCGCTTTTGGTGGGGA AGAGGCGAAGGAGCCTTGGGGCAGCATCGAGCAACGAGATGAAGAGAGCG AAGGCGGCGAAAAATGAGTTCAGGAAGAAAGAGGGAGGGGGGGAGGGAGC GCTGAGGCTGATGAGGGGAGATCCGTTGGTGATTGACTCTTGGAATGAGC GCGCGTTGAGGCATGTGCTGCACCTGGGAGAGGAGATGGAGGGTTGGGAG CACGTCACAACTTCGGAGAACGTGTGTGTCTACCGCAAGTACCTTCCGAC CTCTTCCTCCCCTCCCTCCTCCTCCCCCTCGGCCACCGCCACCACCTTCT GCTCCTCTGCCGGCTGTTGCATGATAGACGAGCATGGCATCCTGACCTCC CCCTCCTCCTCCCTATCCACCTTACCCCCTTCCTCCACTCCCGCCGTGTG GAAGGAGGAGGGCAGGGGGAGGTTTGCTTGCGTGAAGGCTGTGGGCGTGG TGGACGCCCCGGTGAAGCGAGTCTTCGAGCTCTTCATGGACAACACGAGG GTGGCCGAGTACAACGAGCACTGCCGCGAGATCGAGGATATTGACACCTT GTCGGCCAATACCAAAGTCACCTGGTCGGCCTCTGGGCGCTACGGACCTT TTAAAGCAAGGGACTTCTGCACGGTTGTGCATTACCGCCACATGGACGAC GGCAGTTTGGTGGTTGTTAACAGAGCGGCCGAGCACGTCCGAGCGCCGCG GAGCGAGAAGTACGTCCGCTCGGAGATTCTTCTGGCCGGGAATATCATGC GCCCTCACCCTTCTGACCCGAATAAGACTTTGCTCGTGACTTTAACCCAC ATCAACCCAGGTGGCTCCATTGATAGTAAAGCAGGCACGTAGATGGGGAT GGTGGAGGGCAGGGTGCAGGAGGTGAGGGAAAGATGGAGGGAGGGCATAC ATGCAGCGGTAGCCACGGTGGAGGGAATGAGGGAGGGAGTGAGGGAGAGG CAGCAGTCTTGGGAGGGGTGGAGGGAGGGGGTAAATTCCAAGGCCTGCGC CTGGGCTGGCCGTTACATTGACTTGGCACAGGCGGGGGGAGAGGACGAGG GGGAGGAAGGAGAGGATGGGATGGAGGGAGGGATGCAGAAGGGGGAGCAC GGGAAGGGGGGAAAGGTGCGGGTGTTGTCGTCGCTTTTGGTGGGGAAGAG GCGAAGGAGCCTTGGGGCAGCATCGAGCAACGAGATGAAGAGAGCGAAGG CGGCGAAAAATGAGTTCAGGAAGAAAGAGGGAGGGGGGGAGGGAGCGCTG AGGCTGATGAGGGGAGATCCGTTGGTGATTGACTCTTGGAATGAGCGCGC GTTGAGGCATGTGCTGCACCTGGGAGAGGAGATGGAGGGTTGGGAGCACG TCACAACTTCGGAGAACGTGTGTGTCTACCGCAAGTACCTTCCGACCTCT TCCTCCCCTCCCTCCTCCTCCCCCTCGGCCACCGCCACCACCTTCTGCTC CTCTGCCGGCTGTTGCATGATAGACGAGCATGGCATCCTGACCTCCCCCT CCTCCTCCCTATCCACCTTACCCCCTTCCTCCACTCCCGCCGTGTGGAAG GAGGAGGGCAGGGGGAGGTTTGCTTGCGTGAAGGCTGTGGGCGTGGTGGA CGCCCCGGTGAAGCGAGTCTTCGAGCTCTTCATGGACAACACGAGGGTGG CCGAGTACAACGAGCACTGCCGCGAGATCGAGGATATTGACACCTTGTCG GCCAATACCAAAGTCACCTGGTCGGCCTCTGGGCGCTACGGACCTTTTAA AGCAAGGGACTTCTGCACGGTTGTGCATTACCGCCACATGGACGACGGCA GTTTGGTGGTTGTTAACAGAGCGGCCGAGCACGTCCGAGCGCCGCGGAGC GAGAAGTACGTCCGCTCGGAGATTCTTCTGGCCGGGAATATCATGCGCCC TCACCCTTCTGACCCGAATAAGACTTTGCTCGTGACTTTAACCCACATCA ACCCAGGTGGCTCCATTGATAGTAAAGCAGGCACGTAGATGGGGATGGTG GAGGGCAGGGTGCAGGAGGTGAGGGAAAGATGGAGGGAGGGCATACATGC AGCGGTAGCCACGGTGGAGGGAATGAGGGAGGGAGTGAGGGAGAGGCAGC AGTCTTGGGAGGGGTGGAGGGAGGGGGTAAATTCCAAGGCCTGCGCCTGG GCTGGCCGTTACATTGACTTGGCACAGGCGGGGGGAGAGGACGAGGGGGA GGAAGGAGAGGATGGGATGGAGGGAGGGATGCAGAAGGGGGAGCACGGGA AGGGGGGAAAGGTGCGGGTGTTGTCGTCGCTTTTGGTGGGGAAGAGGCGA AGGAGCCTTGGGGCAGCATCGAGCAACGAGATGAAGAGAGCGAAGGCGGC GAAAAATGAGTTCAGGAAGAAAGAGGGAGGGGGGGAGGGAGCGCTGAGGC TGATGAGGGGAGATCCGTTGGTGATTGACTCTTGGAATGAGCGCGCGTTG AGGCATGTGCTGCACCTGGGAGAGGAGATGGAGGGTTGGGAGCACGTCAC AACTTCGGAGAACGTGTGTGTCTACCGCAAGTACCTTCCGACCTCTTCCT CCCCTCCCTCCTCCTCCCCCTCGGCCACCGCCACCACCTTCTGCTCCTCT GCCGGCTGTTGCATGATAGACGAGCATGGCATCCTGACCTCCCCCTCCTC CTCCCTATCCACCTTACCCCCTTCCTCCACTCCCGCCGTGTGGAAGGAGG AGGGCAGGGGGAGGTTTGCTTGCGTGAAGGCTGTGGGCGTGGTGGACGCC CCGGTGAAGCGAGTCTTCGAGCTCTTCATGGACAACACGAGGGTGGCCGA GTACAACGAGCACTGCCGCGAGATCGAGGATATTGACACCTTGTCGGCCA ATACCAAAGTCACCTGGTCGGCCTCTGGGCGCTACGGACCTTTTAAAGCA AGGGACTTCTGCACGGTTGTGCATTACCGCCACATGGACGACGGCAGTTT GGTGGTTGTTAACAGAGCGGCCGAGCACGTCCGAGCGCCGCGGAGCGAGA AGTACGTCCGCTCGGAGATTCTTCTGGCCGGGAATATCATGCGCCCTCAC CCTTCTGACCCGAATAAGACTTTGCTCGTGACTTTAACCCACATCAACCC AGGTGGCTCCATTGATAGTAAAGCAGGCACGTAGATGGGGATGGTGGAGG GCAGGGTGCAGGAGGTGAGGGAAAGATGGAGGGAGGGCATACATGCAGCG GTAGCCACGGTGGAGGGAATGAGGGAGGGAGTGAGGGAGAGGCAGCAGTC TTGGGAGGGGTGGAGGGAGGGGGTAAATTCCAAGGCCTGCGCCTGGGCTG GCCGTTACATTGACTTGGCACAGGCGGGGGGAGAGGACGAGGGGGAGGAA GGAGAGGATGGGATGGAGGGAGGGATGCAGAAGGGGGAGCACGGGAAGGG GGGAAAGGTGCGGGTGTTGTCGTCGCTTTTGGTGGGGAAGAGGCGAAGGA GCCTTGGGGCAGCATCGAGCAACGAGATGAAGAGAGCGAAGGCGGCGAAA AATGAGTTCAGGAAGAAAGAGGGAGGGGGGGAGGGAGCGCTGAGGCTGAT GAGGGGAGATCCGTTGGTGATTGACTCTTGGAATGAGCGCGCGTTGAGGC ATGTGCTGCACCTGGGAGAGGAGATGGAGGGTTGGGAGCACGTCACAACT TCGGAGAACGTGTGTGTCTACCGCAAGTACCTTCCGACCTCTTCCTCCCC TCCCTCCTCCTCCCCCTCGGCCACCGCCACCACCTTCTGCTCCTCTGCCG GCTGTTGCATGATAGACGAGCATGGCATCCTGACCTCCCCCTCCTCCTCC CTATCCACCTTACCCCCTTCCTCCACTCCCGCCGTGTGGAAGGAGGAGGG CAGGGGGAGGTTTGCTTGCGTGAAGGCTGTGGGCGTGGTGGACGCCCCGG TGAAGCGAGTCTTCGAGCTCTTCATGGACAACACGAGGGTGGCCGAGTAC AACGAGCACTGCCGCGAGATCGAGGATATTGACACCTTGTCGGCCAATAC CAAAGTCACCTGGTCGGCCTCTGGGCGCTACGGACCTTTTAAAGCAAGGG ACTTCTGCACGGTTGTGCATTACCGCCACATGGACGACGGCAGTTTGGTG GTTGTTAACAGAGCGGCCGAGCACGTCCGAGCGCCGCGGAGCGAGAAGTA CGTCCGCTCGGAGATTCTTCTGGCCGGGAATATCATGCGCCCTCACCCTT CTGACCCGAATAAGACTTTGCTCGTGACTTTAACCCACATCAACCCAGGT GGCTCCATTGATAGTAAAGCAGGCACGTAG back to top
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