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Properties
| Property Name | Value |
|---|
| TranscriptId | 604054 |
| Track | FilteredModels2 |
| ProteinId | 603968 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_28 | supercontig | scaffold_28:119005..121124 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8777 ID=mRNA_8777|Name=jgi.p|Nanoce1779_2|603968|organism=Nannochloropsis oceanica|type=mRNA|length=1178bp
GAGATGAGGAGGAGGAGGGCGCGAGTGATGAGGAGGTCCAAGTCATCGAA
CAGCGACCATCTGCCGCGGCCGTAAGCATTGGAGGAGGGGCGGTTAAACG
GAAGGCCTCCTCCTCCTCCTCTTCCTCTTCCTCCTCTTCCTCAGCAGCAG
CAGCCGCAGGAATATCCGAGTCAGGCAGCACGGGGGCGGCGGAGAAGAAG
CAAAGAAAAACAGGGCCAAGGGGAGGGGGAGGAGGGGCAGAACTGGTGAA
ATTGCCGCCGATGAGGGCCTTGCACCCGGTAGATCGGAAGGACAAAGAGG
ACGTGGCACATGTCCTTGACTACGTGGAGGACATTCACTTGTACCTCAAG
GCGGGTGAGACCAAATGGGCGGCCCGGCCCTACATGTCTTCGCAGAAGGA
AATCAACGCCAAAATGCGGGCCATCCTGGTGGACTGGATCGTGGAGGTGC
ACATGAAGTTTAAGCTGGTGCCCCCTACTCTCTACCTGGCCGTGCAGCTC
ATTGACCGGTACTGCATGGAGAACGCTGTCTCTCGGACGCGCTTGCAGCT
CGTGGGAGTCACTGCACTCCTCATCGCCTGCAAGTACGAAGAGATCTACC
CCCCCGAGGTCCGCGATTGTGTGTACATCACCGACAACGCCTACACCCGC
GAGGAGGTCTTGAAGATGGAGCAAAAGATTCTGAAGCACTTCGGCTTCCG
TGTGTCCATGCCCACCATGCACGCATTCCTCCTTCGCTTCCTCAAGATAG
GAGAGGGCGGCCACCTGTGTTCTCCCCGCGCGTTCTACTACGCCGAGCGC
GCCTTGCAGGAGCACGAGATGCTCCAGTGGCGGCCGTCGCTGGTGGCCGC
CGCCGCCGTGTACCTGGCCAAACGCAACGAGACCCTCGACGCCTGGACCC
CGTCCCTTATCGCCTACTCCGGCTACACGGAAGCCGACGTCCTGCCATGC
GCCACCCTCCTCTCCCGCTGGATCCACGAGACGACCCAGACGCAAAGCAA
ACGCCTCCTCAACGCCGTCAAGAAGAAATTCAGCTCCAGTAAGTGGGCCG
AGATCGCCGAAGCCGACCACTTGAGACTTCCCATTACAGGGGGTCTGTAA
GCGTACGCGCGTCTTGTCTCCCTCCCTTTTCCCTCCTTTTCCCTTCAACT
TCTTTGGGAGGGGATGGGGGGGGGGGCT back to topprotein sequence of jgi.p|Nanoce1779_2|603968 >mRNA_8777-protein ID=mRNA_8777-protein|Name=jgi.p|Nanoce1779_2|603968|organism=Nannochloropsis oceanica|type=polypeptide|length=280bp
MRALHPVDRKDKEDVAHVLDYVEDIHLYLKAGETKWAARPYMSSQKEINA
KMRAILVDWIVEVHMKFKLVPPTLYLAVQLIDRYCMENAVSRTRLQLVGV
TALLIACKYEEIYPPEVRDCVYITDNAYTREEVLKMEQKILKHFGFRVSM
PTMHAFLLRFLKIGEGGHLCSPRAFYYAERALQEHEMLQWRPSLVAAAAV
YLAKRNETLDAWTPSLIAYSGYTEADVLPCATLLSRWIHETTQTQSKRLL
NAVKKKFSSSKWAEIAEADHLRLPITGGL* back to topmRNA from alignment at scaffold_28:119005..121124- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8777 ID=mRNA_8777|Name=jgi.p|Nanoce1779_2|603968|organism=Nannochloropsis oceanica|type=mRNA|length=2120bp|location=Sequence derived from alignment at scaffold_28:119005..121124- (Nannochloropsis oceanica)
GAGATGAGGAGGAGGAGGGCGCGAGTGATGAGGAGGTCCAAGTCATCGAA
CAGCGACCATCTGCCGCGGCCGTAAGCATTGGAGGAGGGGCGGTTAAACG
GAAGGCCTCCTCCTCCTCCTCTTCCTCTTCCTCCTCTTCCTCAGCAGCAG
CAGCCGCAGGAATATCCGAGTCAGGCAGCACGGGGGCGGCGGAGAAGAAG
CAAAGAAAAACAGGGCCAAGGGGAGGGGGAGGAGGGGCAGAACTGGTGAA
ATTGCCGCCGATGAGGGCCTTGCACCCGGTAGATCGGAAGGACAAAGAGG
ACGTGGCACATGTCCTTGACTACGTGGAGGACATTCACTTGTACCTCAAG
GCGGGTGAGGTAAGGAAGGGAGGGAAAGAAGGGAGGGAAAGAAGGGAGGG
AAGGAAGTCGGCATGTGTGTGTCTTCGTTTTTATTCGGTGTGACGAAGTT
GACTTGCTTTCCCTCCCTCCCCTCCCCTCCCTCCCTGCTTCCCTCCCCCC
CCTTCATTCCAGACCAAATGGGCGGCCCGGCCCTACATGTCTTCGCAGAA
GGAAATCAACGCCAAAATGCGGGCCATCCTGGTGGACTGGATCGTGGAGG
TGCACATGAAGTTTAAGCTGGTGCCCCCTACTCTCTACCTGGCCGTGCAG
CTCATTGACCGGTGCGTCCGTCCGTCCGTCCGTCCGTCCCTTCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
CTTGTTCGTTCCGTGTCGTGCAAGCGCCGCCAGAGGGAGGAAGTTAGAGC
ACGAGAAACATCGAGACAGAGAGAGACAGAGAGAGAGGCAGAGAAAGCGA
GCACAAAACACTCTCCGCAACCATGCGTTCGACATGACACTCCCCCTTCC
TCCCTCCTTCCCTCCCTCCCCCCCTCCCCCCCTCTCAGGTACTGCATGGA
GAACGCTGTCTCTCGGACGCGCTTGCAGCTCGTGGGAGTCACTGCACTCC
TCATCGCCTGCAAGTACGAAGAGATCTACCCCCCCGAGGTCCGCGATTGT
GTGTACATCACCGACAACGCCTACACCCGCGGTACGTCCTCCCTCCCTCC
CTCCCTCCCTGAAATCCTCCCTCCCTCCCTCACTCCGTTCCCTTGCTCAT
CGCATGGCCTGACGCTTGCCTGTCTGTCGCTTCTCCATCTGTTCTGTTCA
AAACCCAAAACCACCCCCCTCACCCCCCTTTCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCCTTCCAGAGGAGGTCTTGAAGATGGAGCAAAA
GATTCTGAAGCACTTCGGCTTCCGTGTGTCCATGCCCACCATGCACGCAT
TCCTCCTTCGCTTCCTCAAGATAGGAGAGGGCGGCCACCTGTGTTCTCCC
CGCGCGTTCTACTACGCCGAGCGCGCCTTGCAGGCAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGAGAGAGGGAGGGGTGTGCCTTGGAGCGTG
CATAGGGTGTTGGAATGGGTCGAGTCGACAAGAGAGGGGAGAGAAACAGC
CTTTCCGCATGCTCACCTTCCCTCCCTCCCTCCCCTTTTCCCAGGAGCAC
GAGATGCTCCAGTGGCGGCCGTCGCTGGTGGCCGCCGCCGCCGTGTACCT
GGCCAAACGCAACGAGACCCTCGACGCCTGGGTGAGTAGAAGAAGGGAGG
GAGGGAGGGAGGGGGGGAGGGAGAGAAGGCAGGGGGACAGGAGCGAGTTT
GAGAGAGTCCTTTTAGATGGCACACCACCACTTGTTCTCACTCCACCCTC
CGTCCTCCCTCCCTCCCTCCCTACCTCCCTACCTCCAGACCCCGTCCCTT
ATCGCCTACTCCGGCTACACGGAAGCCGACGTCCTGCCATGCGCCACCCT
CCTCTCCCGCTGGATCCACGAGACGACCCAGACGCAAAGCAAACGCCTCC
TCAACGCCGTCAAGAAGAAATTCAGCTCCAGTAAGTGGGCCGAGATCGCC
GAAGCCGACCACTTGAGACTTCCCATTACAGGGGGTCTGTAAGCGTACGC
GCGTCTTGTCTCCCTCCCTTTTCCCTCCTTTTCCCTTCAACTTCTTTGGG
AGGGGATGGGGGGGGGGGCT back to topCoding sequence (CDS) from alignment at scaffold_28:119005..121124- >mRNA_8777 ID=mRNA_8777|Name=jgi.p|Nanoce1779_2|603968|organism=Nannochloropsis oceanica|type=CDS|length=5040bp|location=Sequence derived from alignment at scaffold_28:119005..121124- (Nannochloropsis oceanica)
ACCCCGTCCCTTATCGCCTACTCCGGCTACACGGAAGCCGACGTCCTGCC
ATGCGCCACCCTCCTCTCCCGCTGGATCCACGAGACGACCCAGACGCAAA
GCAAACGCCTCCTCAACGCCGTCAAGAAGAAATTCAGCTCCAGTAAGTGG
GCCGAGATCGCCGAAGCCGACCACTTGAGACTTCCCATTACAGGGGGTCT
GTAAGAGCACGAGATGCTCCAGTGGCGGCCGTCGCTGGTGGCCGCCGCCG
CCGTGTACCTGGCCAAACGCAACGAGACCCTCGACGCCTGGAGGAGGTCT
TGAAGATGGAGCAAAAGATTCTGAAGCACTTCGGCTTCCGTGTGTCCATG
CCCACCATGCACGCATTCCTCCTTCGCTTCCTCAAGATAGGAGAGGGCGG
CCACCTGTGTTCTCCCCGCGCGTTCTACTACGCCGAGCGCGCCTTGCAGG
TACTGCATGGAGAACGCTGTCTCTCGGACGCGCTTGCAGCTCGTGGGAGT
CACTGCACTCCTCATCGCCTGCAAGTACGAAGAGATCTACCCCCCCGAGG
TCCGCGATTGTGTGTACATCACCGACAACGCCTACACCCGCGACCAAATG
GGCGGCCCGGCCCTACATGTCTTCGCAGAAGGAAATCAACGCCAAAATGC
GGGCCATCCTGGTGGACTGGATCGTGGAGGTGCACATGAAGTTTAAGCTG
GTGCCCCCTACTCTCTACCTGGCCGTGCAGCTCATTGACCGATGAGGGCC
TTGCACCCGGTAGATCGGAAGGACAAAGAGGACGTGGCACATGTCCTTGA
CTACGTGGAGGACATTCACTTGTACCTCAAGGCGGGTGAGACCCCGTCCC
TTATCGCCTACTCCGGCTACACGGAAGCCGACGTCCTGCCATGCGCCACC
CTCCTCTCCCGCTGGATCCACGAGACGACCCAGACGCAAAGCAAACGCCT
CCTCAACGCCGTCAAGAAGAAATTCAGCTCCAGTAAGTGGGCCGAGATCG
CCGAAGCCGACCACTTGAGACTTCCCATTACAGGGGGTCTGTAAGAGCAC
GAGATGCTCCAGTGGCGGCCGTCGCTGGTGGCCGCCGCCGCCGTGTACCT
GGCCAAACGCAACGAGACCCTCGACGCCTGGAGGAGGTCTTGAAGATGGA
GCAAAAGATTCTGAAGCACTTCGGCTTCCGTGTGTCCATGCCCACCATGC
ACGCATTCCTCCTTCGCTTCCTCAAGATAGGAGAGGGCGGCCACCTGTGT
TCTCCCCGCGCGTTCTACTACGCCGAGCGCGCCTTGCAGGTACTGCATGG
AGAACGCTGTCTCTCGGACGCGCTTGCAGCTCGTGGGAGTCACTGCACTC
CTCATCGCCTGCAAGTACGAAGAGATCTACCCCCCCGAGGTCCGCGATTG
TGTGTACATCACCGACAACGCCTACACCCGCGACCAAATGGGCGGCCCGG
CCCTACATGTCTTCGCAGAAGGAAATCAACGCCAAAATGCGGGCCATCCT
GGTGGACTGGATCGTGGAGGTGCACATGAAGTTTAAGCTGGTGCCCCCTA
CTCTCTACCTGGCCGTGCAGCTCATTGACCGATGAGGGCCTTGCACCCGG
TAGATCGGAAGGACAAAGAGGACGTGGCACATGTCCTTGACTACGTGGAG
GACATTCACTTGTACCTCAAGGCGGGTGAGACCCCGTCCCTTATCGCCTA
CTCCGGCTACACGGAAGCCGACGTCCTGCCATGCGCCACCCTCCTCTCCC
GCTGGATCCACGAGACGACCCAGACGCAAAGCAAACGCCTCCTCAACGCC
GTCAAGAAGAAATTCAGCTCCAGTAAGTGGGCCGAGATCGCCGAAGCCGA
CCACTTGAGACTTCCCATTACAGGGGGTCTGTAAGAGCACGAGATGCTCC
AGTGGCGGCCGTCGCTGGTGGCCGCCGCCGCCGTGTACCTGGCCAAACGC
AACGAGACCCTCGACGCCTGGAGGAGGTCTTGAAGATGGAGCAAAAGATT
CTGAAGCACTTCGGCTTCCGTGTGTCCATGCCCACCATGCACGCATTCCT
CCTTCGCTTCCTCAAGATAGGAGAGGGCGGCCACCTGTGTTCTCCCCGCG
CGTTCTACTACGCCGAGCGCGCCTTGCAGGTACTGCATGGAGAACGCTGT
CTCTCGGACGCGCTTGCAGCTCGTGGGAGTCACTGCACTCCTCATCGCCT
GCAAGTACGAAGAGATCTACCCCCCCGAGGTCCGCGATTGTGTGTACATC
ACCGACAACGCCTACACCCGCGACCAAATGGGCGGCCCGGCCCTACATGT
CTTCGCAGAAGGAAATCAACGCCAAAATGCGGGCCATCCTGGTGGACTGG
ATCGTGGAGGTGCACATGAAGTTTAAGCTGGTGCCCCCTACTCTCTACCT
GGCCGTGCAGCTCATTGACCGATGAGGGCCTTGCACCCGGTAGATCGGAA
GGACAAAGAGGACGTGGCACATGTCCTTGACTACGTGGAGGACATTCACT
TGTACCTCAAGGCGGGTGAGACCCCGTCCCTTATCGCCTACTCCGGCTAC
ACGGAAGCCGACGTCCTGCCATGCGCCACCCTCCTCTCCCGCTGGATCCA
CGAGACGACCCAGACGCAAAGCAAACGCCTCCTCAACGCCGTCAAGAAGA
AATTCAGCTCCAGTAAGTGGGCCGAGATCGCCGAAGCCGACCACTTGAGA
CTTCCCATTACAGGGGGTCTGTAAGAGCACGAGATGCTCCAGTGGCGGCC
GTCGCTGGTGGCCGCCGCCGCCGTGTACCTGGCCAAACGCAACGAGACCC
TCGACGCCTGGAGGAGGTCTTGAAGATGGAGCAAAAGATTCTGAAGCACT
TCGGCTTCCGTGTGTCCATGCCCACCATGCACGCATTCCTCCTTCGCTTC
CTCAAGATAGGAGAGGGCGGCCACCTGTGTTCTCCCCGCGCGTTCTACTA
CGCCGAGCGCGCCTTGCAGGTACTGCATGGAGAACGCTGTCTCTCGGACG
CGCTTGCAGCTCGTGGGAGTCACTGCACTCCTCATCGCCTGCAAGTACGA
AGAGATCTACCCCCCCGAGGTCCGCGATTGTGTGTACATCACCGACAACG
CCTACACCCGCGACCAAATGGGCGGCCCGGCCCTACATGTCTTCGCAGAA
GGAAATCAACGCCAAAATGCGGGCCATCCTGGTGGACTGGATCGTGGAGG
TGCACATGAAGTTTAAGCTGGTGCCCCCTACTCTCTACCTGGCCGTGCAG
CTCATTGACCGATGAGGGCCTTGCACCCGGTAGATCGGAAGGACAAAGAG
GACGTGGCACATGTCCTTGACTACGTGGAGGACATTCACTTGTACCTCAA
GGCGGGTGAGACCCCGTCCCTTATCGCCTACTCCGGCTACACGGAAGCCG
ACGTCCTGCCATGCGCCACCCTCCTCTCCCGCTGGATCCACGAGACGACC
CAGACGCAAAGCAAACGCCTCCTCAACGCCGTCAAGAAGAAATTCAGCTC
CAGTAAGTGGGCCGAGATCGCCGAAGCCGACCACTTGAGACTTCCCATTA
CAGGGGGTCTGTAAGAGCACGAGATGCTCCAGTGGCGGCCGTCGCTGGTG
GCCGCCGCCGCCGTGTACCTGGCCAAACGCAACGAGACCCTCGACGCCTG
GAGGAGGTCTTGAAGATGGAGCAAAAGATTCTGAAGCACTTCGGCTTCCG
TGTGTCCATGCCCACCATGCACGCATTCCTCCTTCGCTTCCTCAAGATAG
GAGAGGGCGGCCACCTGTGTTCTCCCCGCGCGTTCTACTACGCCGAGCGC
GCCTTGCAGGTACTGCATGGAGAACGCTGTCTCTCGGACGCGCTTGCAGC
TCGTGGGAGTCACTGCACTCCTCATCGCCTGCAAGTACGAAGAGATCTAC
CCCCCCGAGGTCCGCGATTGTGTGTACATCACCGACAACGCCTACACCCG
CGACCAAATGGGCGGCCCGGCCCTACATGTCTTCGCAGAAGGAAATCAAC
GCCAAAATGCGGGCCATCCTGGTGGACTGGATCGTGGAGGTGCACATGAA
GTTTAAGCTGGTGCCCCCTACTCTCTACCTGGCCGTGCAGCTCATTGACC
GATGAGGGCCTTGCACCCGGTAGATCGGAAGGACAAAGAGGACGTGGCAC
ATGTCCTTGACTACGTGGAGGACATTCACTTGTACCTCAAGGCGGGTGAG
ACCCCGTCCCTTATCGCCTACTCCGGCTACACGGAAGCCGACGTCCTGCC
ATGCGCCACCCTCCTCTCCCGCTGGATCCACGAGACGACCCAGACGCAAA
GCAAACGCCTCCTCAACGCCGTCAAGAAGAAATTCAGCTCCAGTAAGTGG
GCCGAGATCGCCGAAGCCGACCACTTGAGACTTCCCATTACAGGGGGTCT
GTAAGAGCACGAGATGCTCCAGTGGCGGCCGTCGCTGGTGGCCGCCGCCG
CCGTGTACCTGGCCAAACGCAACGAGACCCTCGACGCCTGGAGGAGGTCT
TGAAGATGGAGCAAAAGATTCTGAAGCACTTCGGCTTCCGTGTGTCCATG
CCCACCATGCACGCATTCCTCCTTCGCTTCCTCAAGATAGGAGAGGGCGG
CCACCTGTGTTCTCCCCGCGCGTTCTACTACGCCGAGCGCGCCTTGCAGG
TACTGCATGGAGAACGCTGTCTCTCGGACGCGCTTGCAGCTCGTGGGAGT
CACTGCACTCCTCATCGCCTGCAAGTACGAAGAGATCTACCCCCCCGAGG
TCCGCGATTGTGTGTACATCACCGACAACGCCTACACCCGCGACCAAATG
GGCGGCCCGGCCCTACATGTCTTCGCAGAAGGAAATCAACGCCAAAATGC
GGGCCATCCTGGTGGACTGGATCGTGGAGGTGCACATGAAGTTTAAGCTG
GTGCCCCCTACTCTCTACCTGGCCGTGCAGCTCATTGACCGATGAGGGCC
TTGCACCCGGTAGATCGGAAGGACAAAGAGGACGTGGCACATGTCCTTGA
CTACGTGGAGGACATTCACTTGTACCTCAAGGCGGGTGAG back to top
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