Properties
Property Name | Value |
TranscriptId | 559995 |
Track | FilteredModels2 |
ProteinId | 559909 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_28 | supercontig | scaffold_28:7214..8384 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8740 ID=mRNA_8740|Name=jgi.p|Nanoce1779_2|559909|organism=Nannochloropsis oceanica|type=mRNA|length=1099bp ATGGCCAGCAACGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTT TTCCTCCTCCTCCTCCCCACCGCCCAACCCCCTCCCTCCCTCCCTTCCCA CCACTCCAACGCCCAAACATGTAAGGAAAAACGGCCTCAAAATCCACGAT CCAAATCTCGAAGTCATTGTCGTGGACGGCGGCTCCACTGACGGCACCCA ACGTCTCGCGCTAGCCCTCGGTGCCCGCCTTGTCCAATCCCCTCTCGCCA ACCGCGCCGCTCAATTGAATCTCGGTGCCGCAGAAGCAGCAGGCGACATC CTCCTCTTCCTTCACGGCGACACCCTCCTTCCCCCCACCTGGGAAGACGA TGTTCGAGGGGCCTTTGCCGGCGACCCCACCATCCTTGCCACTGCCTTCA AGCTTAAAATTATGGGCCGACGCCCCTTCTACCGTGTCATCGAAGCGAGC ATCACTGCGCGTAGCTCCTGGCCCTGGTCCATGCCCTACGGCGATCAGGC CTTGGCTGTCCGGAGGAAGGTATTTGATGTATTGGGAGGCTTCCCTGACG TGCCAATCATGGAAGACTACTCCTTCGTCCAAGCATTGCGGGGGAGGGGA GATGGAGGGATGTACGGGGGCAGAATCGAGTTGTTGCCGAGTTGTGTGCG GACGTCAGGGAGGAGGTGGGAGAGGGTGGGGGTACTCCGGACGACGCTCA TCAACCAGTGCGTAATTCTGGGGTGGCATTTAAAGGTGGAACCGGACCGT CTAGCTGTCTTCTATCGACAGGCGAAACATGGAGGAGGGAGGGAGGGAGG GAGGTGGTGGGAGAGGAAGGGGGAGCCAATGACATTTGTGAGGGCGAGGG GCGTGAAGGAAGGGGAGGAAGAAGAGGAGGAGGAAGAGGAGGAGGAGGGG GAGGAAGAGGAGCGGAGAAGGATGGAGGAGAAGGCGTTCGCGGCTGTGTT GCCGTTGGTAGGTGGATTTTGAATAAAGAGAGGGAGAGAGGAAGAGGGGG TATAGAAGCAAGAGGAGGAGGAGGAGGAGGAGGGGGAAGAGGAGCATTTG AAAAAGAAAGATGTCGAGTAATGTTCGTTTGTGAATATAATTGATTAGG back to topprotein sequence of jgi.p|Nanoce1779_2|559909 >mRNA_8740-protein ID=mRNA_8740-protein|Name=jgi.p|Nanoce1779_2|559909|organism=Nannochloropsis oceanica|type=polypeptide|length=324bp MASNASSSSSSSSSSSFSSSSSPPPNPLPPSLPTTPTPKHVRKNGLKIHD PNLEVIVVDGGSTDGTQRLALALGARLVQSPLANRAAQLNLGAAEAAGDI LLFLHGDTLLPPTWEDDVRGAFAGDPTILATAFKLKIMGRRPFYRVIEAS ITARSSWPWSMPYGDQALAVRRKVFDVLGGFPDVPIMEDYSFVQALRGRG DGGMYGGRIELLPSCVRTSGRRWERVGVLRTTLINQCVILGWHLKVEPDR LAVFYRQAKHGGGREGGRWWERKGEPMTFVRARGVKEGEEEEEEEEEEEG EEEERRRMEEKAFAAVLPLVGGF* back to topmRNA from alignment at scaffold_28:7214..8384- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8740 ID=mRNA_8740|Name=jgi.p|Nanoce1779_2|559909|organism=Nannochloropsis oceanica|type=mRNA|length=1171bp|location=Sequence derived from alignment at scaffold_28:7214..8384- (Nannochloropsis oceanica) ATGGCCAGCAACGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTT
TTCCTCCTCCTCCTCCCCACCGCCCAACCCCCTCCCTCCCTCCCTTCCCA
CCACTCCAACGCCCAAACATGTAAGGAAAAACGGCCTCAAAATCCACGAT
CCAAATCTCGAAGTCATTGTCGTGGACGGCGGCTCCACTGACGGCACCCA
ACGTCTCGCGCTAGCCCTCGGTGCCCGCCTTGTCCAATCCCCTCTCGCCA
ACCGCGCCGCTCAATTGAATCTCGGTGCCGCAGAAGCAGCAGGCGACATC
CTCCTCTTCCTTCACGGCGACACCCTCCTTCCCCCCACCTGGGAAGACGA
TGTTCGAGGGGCCTTTGCCGGCGACCCCACCATCCTTGCCACTGCCTTCA
AGCTTAAAATTATGGGCCGACGCCCCTTCTACCGTGTCATCGAAGCGAGC
ATCACTGCGCGTAGCTCCTGGCCCTGGTCCATGCCCTACGGCGATCAGGC
CTTGGCTGTCCGGAGGAAGGTATTTGATGTATTGGGAGGCTTCCCTGACG
TGCCAATCATGGAAGACTACTCCTTCGTCCAAGCATTGCGGGTGCTGGCC
AAGAGGCCGCCCCCTCCCAAGCCGAGGAGTCGGAGGAAGGGGGGGAAGAA
GGGAGGGAGGGAGGGGAGGGGAGATGGAGGGATGTACGGGGGCAGAATCG
AGTTGTTGCCGAGTTGTGTGCGGACGTCAGGGAGGAGGTGGGAGAGGGTG
GGGGTACTCCGGACGACGCTCATCAACCAGTGCGTAATTCTGGGGTGGCA
TTTAAAGGTGGAACCGGACCGTCTAGCTGTCTTCTATCGACAGGCGAAAC
ATGGAGGAGGGAGGGAGGGAGGGAGGTGGTGGGAGAGGAAGGGGGAGCCA
ATGACATTTGTGAGGGCGAGGGGCGTGAAGGAAGGGGAGGAAGAAGAGGA
GGAGGAAGAGGAGGAGGAGGGGGAGGAAGAGGAGCGGAGAAGGATGGAGG
AGAAGGCGTTCGCGGCTGTGTTGCCGTTGGTAGGTGGATTTTGAATAAAG
AGAGGGAGAGAGGAAGAGGGGGTATAGAAGCAAGAGGAGGAGGAGGAGGA
GGAGGGGGAAGAGGAGCATTTGAAAAAGAAAGATGTCGAGTAATGTTCGT
TTGTGAATATAATTGATTAGG back to topCoding sequence (CDS) from alignment at scaffold_28:7214..8384- >mRNA_8740 ID=mRNA_8740|Name=jgi.p|Nanoce1779_2|559909|organism=Nannochloropsis oceanica|type=CDS|length=1944bp|location=Sequence derived from alignment at scaffold_28:7214..8384- (Nannochloropsis oceanica) GGGAGGGGAGATGGAGGGATGTACGGGGGCAGAATCGAGTTGTTGCCGAG TTGTGTGCGGACGTCAGGGAGGAGGTGGGAGAGGGTGGGGGTACTCCGGA CGACGCTCATCAACCAGTGCGTAATTCTGGGGTGGCATTTAAAGGTGGAA CCGGACCGTCTAGCTGTCTTCTATCGACAGGCGAAACATGGAGGAGGGAG GGAGGGAGGGAGGTGGTGGGAGAGGAAGGGGGAGCCAATGACATTTGTGA GGGCGAGGGGCGTGAAGGAAGGGGAGGAAGAAGAGGAGGAGGAAGAGGAG GAGGAGGGGGAGGAAGAGGAGCGGAGAAGGATGGAGGAGAAGGCGTTCGC GGCTGTGTTGCCGTTGGTAGGTGGATTTTGAATGGCCAGCAACGCCTCCT CCTCCTCCTCCTCCTCCTCCTCCTCTTCCTTTTCCTCCTCCTCCTCCCCA CCGCCCAACCCCCTCCCTCCCTCCCTTCCCACCACTCCAACGCCCAAACA TGTAAGGAAAAACGGCCTCAAAATCCACGATCCAAATCTCGAAGTCATTG TCGTGGACGGCGGCTCCACTGACGGCACCCAACGTCTCGCGCTAGCCCTC GGTGCCCGCCTTGTCCAATCCCCTCTCGCCAACCGCGCCGCTCAATTGAA TCTCGGTGCCGCAGAAGCAGCAGGCGACATCCTCCTCTTCCTTCACGGCG ACACCCTCCTTCCCCCCACCTGGGAAGACGATGTTCGAGGGGCCTTTGCC GGCGACCCCACCATCCTTGCCACTGCCTTCAAGCTTAAAATTATGGGCCG ACGCCCCTTCTACCGTGTCATCGAAGCGAGCATCACTGCGCGTAGCTCCT GGCCCTGGTCCATGCCCTACGGCGATCAGGCCTTGGCTGTCCGGAGGAAG GTATTTGATGTATTGGGAGGCTTCCCTGACGTGCCAATCATGGAAGACTA CTCCTTCGTCCAAGCATTGCGGGGGAGGGGAGATGGAGGGATGTACGGGG GCAGAATCGAGTTGTTGCCGAGTTGTGTGCGGACGTCAGGGAGGAGGTGG GAGAGGGTGGGGGTACTCCGGACGACGCTCATCAACCAGTGCGTAATTCT GGGGTGGCATTTAAAGGTGGAACCGGACCGTCTAGCTGTCTTCTATCGAC AGGCGAAACATGGAGGAGGGAGGGAGGGAGGGAGGTGGTGGGAGAGGAAG GGGGAGCCAATGACATTTGTGAGGGCGAGGGGCGTGAAGGAAGGGGAGGA AGAAGAGGAGGAGGAAGAGGAGGAGGAGGGGGAGGAAGAGGAGCGGAGAA GGATGGAGGAGAAGGCGTTCGCGGCTGTGTTGCCGTTGGTAGGTGGATTT TGAATGGCCAGCAACGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTC CTTTTCCTCCTCCTCCTCCCCACCGCCCAACCCCCTCCCTCCCTCCCTTC CCACCACTCCAACGCCCAAACATGTAAGGAAAAACGGCCTCAAAATCCAC GATCCAAATCTCGAAGTCATTGTCGTGGACGGCGGCTCCACTGACGGCAC CCAACGTCTCGCGCTAGCCCTCGGTGCCCGCCTTGTCCAATCCCCTCTCG CCAACCGCGCCGCTCAATTGAATCTCGGTGCCGCAGAAGCAGCAGGCGAC ATCCTCCTCTTCCTTCACGGCGACACCCTCCTTCCCCCCACCTGGGAAGA CGATGTTCGAGGGGCCTTTGCCGGCGACCCCACCATCCTTGCCACTGCCT TCAAGCTTAAAATTATGGGCCGACGCCCCTTCTACCGTGTCATCGAAGCG AGCATCACTGCGCGTAGCTCCTGGCCCTGGTCCATGCCCTACGGCGATCA GGCCTTGGCTGTCCGGAGGAAGGTATTTGATGTATTGGGAGGCTTCCCTG ACGTGCCAATCATGGAAGACTACTCCTTCGTCCAAGCATTGCGG back to top
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