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Properties
| Property Name | Value |
|---|
| TranscriptId | 217116 |
| Track | FilteredModels2 |
| ProteinId | 217030 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_27 | supercontig | scaffold_27:311424..313387 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8737 ID=mRNA_8737|Name=jgi.p|Nanoce1779_2|217030|organism=Nannochloropsis oceanica|type=mRNA|length=880bp
AACACCCATAGGGCGACTATCGCATCAAGTTCAATGACCCCGGAGGAAGC
AGCAGCGGCGGCTGCTGCGGCAGCGGCAGAAGAGGCTGCCAAGGCGGCGG
GAGCGGGCAGTGGGGCCCCTCCAGGGATGGAGGAGGCGGCCGAGGCGGTG
GTGAAGAGCTCCTTGTCCTTTGCCGTGGTGATTATCATCCTACTGGTCTG
TGCGGGCCTAGCTGCGGCCTTGGTATACTTGCAGCGGAAGCGACACGAGA
CCTCTTCCCTCCTCTCGGGCCTCGATAATCGCTACGACGACATCCTGGAC
CGTCTGCAGGAAATTGGGGATCAATTTGATGACACCATGGAAAAAGCCGA
GGAAGAGCCGTCTACACTCGAGAAACGCAATGCCCTGATCAAACGAGCCG
CAGCCGTCATTCCCATCGTGAGGGTTGTGCAGCAGGAGATGCAGCAGAAG
CAGGTGCTTTACCGGGAAGGCAAGATGCGCGCGGAAGATTTTGAAAGCTT
GCACCGGCTGAAGGGCGCAATTGACGAGGAGACGGAGGTGATCCGTCAGA
TTGCCGAGGAGATTAATCCCGGCTTTGGCCAACGGATCTTCTCCATGGTA
GCTTCCTCGCAACACTTCCAGCTGCTCTTCATGATGGACAGCAACAGCAA
GGCCTACGAGACGGCGCTAGCCGAAAACCCCGATAAGGCCGAACAGAAGC
TCCTCCTCATCATCCACCGAGCCATGCCCTGCTTCGACTTTTGAAGCAAA
TGAAGGGCATCCCCATCGAGGCTCTGCACAAGGACGGCAAGATTTCCCTC
GACGAATACGAGTGTTTCATGGGGTGAGGCGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGATGTGATAAATTA back to topprotein sequence of jgi.p|Nanoce1779_2|217030 >mRNA_8737-protein ID=mRNA_8737-protein|Name=jgi.p|Nanoce1779_2|217030|organism=Nannochloropsis oceanica|type=polypeptide|length=237bp
MTPEEAAAAAAAAAAEEAAKAAGAGSGAPPGMEEAAEAVVKSSLSFAVVI
IILLVCAGLAAALVYLQRKRHETSSLLSGLDNRYDDILDRLQEIGDQFDD
TMEKAEEEPSTLEKRNALIKRAAAVIPIVRVVQQEMQQKQVLYREGKMRA
EDFESLHRLKGAIDEETEVIRQIAEEINPGFGQRIFSMVASSQHFQLLFM
MDSNSKAYETALAENPDKAEQKLLLIIHRAMPCFDF* back to topmRNA from alignment at scaffold_27:311424..313387+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8737 ID=mRNA_8737|Name=jgi.p|Nanoce1779_2|217030|organism=Nannochloropsis oceanica|type=mRNA|length=1964bp|location=Sequence derived from alignment at scaffold_27:311424..313387+ (Nannochloropsis oceanica)
AACACCCATAGGGCGACTATCGCATCAAGTTCAATGACCCCGGAGGAAGC
AGCAGCGGCGGCTGCTGCGGCAGCGGCAGAAGAGGCTGCCAAGGCGGCGG
GAGCGGGCAGTGGGGCCCCTCCAGGGATGGAGGAGGCGGCCGAGGCGGTG
GTGAAGAGCTCCTTGTCCTTTGCCGTGGTGATTATCATCCTACTGGTCTG
TGCGGGCCTAGCTGCGGCCTTGGTATACTTGCAGCGGAAGCGTGAGTGGC
ACCAGGGAGGGCGGGAGGGAGGGAAGGAGAGGCGGCCTACTTCCGCTGTC
TTGCGCGCGACCCATCTGGTTGCCTCCTTGTTCCAATTCAAGGACACTCA
CCTGCTCCTCCCTCCCTCCTTCCCTCCTTTTCTCCCTCCCTTATCAACAG
GACACGAGACCTCTTCCCTCCTCTCGGGCCTCGATAATCGCTACGACGAC
ATCCTGGACCGTCTGCAGGTATGCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCACGCTTACTCGCCTTCCCTTCCCATCGCTCTTTCTAAATAGGAA
ATTGGGGATCAATTTGATGACACCATGGAAAAAGCCGAGGAAGAGCCGTC
TACACTCGAGAAGTAGGGATGGAGGGACGGAGGGGGGAATCTAGGTTTAT
GATCAGATTATTGGTGTTGTCTTCAAATGTCAACATGTCCATATGACATG
CTGCTTATCCCCTCCCTCCCTGCCTCCCTAGACGCAATGCCCTGATCAAA
CGAGCCGCAGCCGTCATTCCCATCGTGAGGGTTGTGCAGCAGGAGATGCA
GCAGAAGCAGGTAGGGAGTGGGAGGGAGGGAGGAAGGAAGGGAGGGAGGG
GGGGAGGGAGGGGGGAAGGGAGGGAGGAGAGGCCAGTCGGTAGAGAGGGC
GTTGCCTCATGCCCTCCCTCCCTCCCTTCCTTCCTAGGTGCTTTACCGGG
AAGGCAAGATGCGCGCGGAAGATTTTGAAAGCTTGCACCGGTGAGATAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
AGGAGGGAGAGCTACGAGTAAAGAGCACGACACGGGGTCGGAGATGGCCG
GCCCGCGCACCCATCCATCCCTCCCTCCCTCCCTCCCTCTCATCCAGGCT
GAAGGGCGCAATTGACGAGGAGACGGAGGTGATCCGTCAGATTGCCGAGG
AGATTAATCCCGGCTTTGGCCAACGGATCTTCTCCATGGTAGCTTCCTCG
CAACACTGTGCGTCCCGCCTTCCCTCCCTCCCTCCCTCCCTCTCTCCCTC
CCTCCCTTCCTTCCTCTTATGCCCGTCGTATCGAGCCCGTCGAAATGATA
CCTGTATTTCTCCCTTCAAACAAACCTCCCTCCCTCCCTCCCTCCCTCCC
TCCAGTCCAGCTGCTCTTCATGATGGACAGCAACAGCAAGGCCTACGAGA
CGGCGCTAGCCGAAAACCCCGATAAGGCCGAACAGAAGCTCCTCCTCATC
ATCCACCGAGCCATGCCCTGCTTCGACTTTTGAAGGTGAGGGAGGAGGGA
GGGAGGGAGGGAGGGAGGAGGAGGGAGAGCAGCGAACCCCTCGAAGAATG
CTTTAACGGAAGACCCTGACTAGATGGCGTGAAAGCCTCTCCTCGTCAGT
TATCCTGCCTCCTTCCCCCTGCTGTGCAGGTCCCACCCTCCCTCCCATTT
CTCCTTCCCACCCTCCCAGCGCCTCGAGCCCGTCCCGACGAAGACACCCA
CACCGTTTCTCCCGTCTGCTCTATCAATCTTGTTCTCACCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTGCTTGGCAGCAAATGAAGGGCATCCCCAT
CGAGGCTCTGCACAAGGACGGCAAGATTTCCCTCGACGAATACGAGTGTT
TCATGGGGTGAGGCGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GATGTGATAAATTA back to topCoding sequence (CDS) from alignment at scaffold_27:311424..313387+ >mRNA_8737 ID=mRNA_8737|Name=jgi.p|Nanoce1779_2|217030|organism=Nannochloropsis oceanica|type=CDS|length=4977bp|location=Sequence derived from alignment at scaffold_27:311424..313387+ (Nannochloropsis oceanica)
ATGACCCCGGAGGAAGCAGCAGCGGCGGCTGCTGCGGCAGCGGCAGAAGA
GGCTGCCAAGGCGGCGGGAGCGGGCAGTGGGGCCCCTCCAGGGATGGAGG
AGGCGGCCGAGGCGGTGGTGAAGAGCTCCTTGTCCTTTGCCGTGGTGATT
ATCATCCTACTGGTCTGTGCGGGCCTAGCTGCGGCCTTGGTATACTTGCA
GCGGAAGCGACACGAGACCTCTTCCCTCCTCTCGGGCCTCGATAATCGCT
ACGACGACATCCTGGACCGTCTGCAGGAAATTGGGGATCAATTTGATGAC
ACCATGGAAAAAGCCGAGGAAGAGCCGTCTACACTCGAGAAACGCAATGC
CCTGATCAAACGAGCCGCAGCCGTCATTCCCATCGTGAGGGTTGTGCAGC
AGGAGATGCAGCAGAAGCAGGTGCTTTACCGGGAAGGCAAGATGCGCGCG
GAAGATTTTGAAAGCTTGCACCGGCTGAAGGGCGCAATTGACGAGGAGAC
GGAGGTGATCCGTCAGATTGCCGAGGAGATTAATCCCGGCTTTGGCCAAC
GGATCTTCTCCATGGTAGCTTCCTCGCAACACTTCCAGCTGCTCTTCATG
ATGGACAGCAACAGCAAGGCCTACGAGACGGCGCTAGCCGAAAACCCCGA
TAAGGCCGAACAGAAGCTCCTCCTCATCATCCACCGAGCCATGCCCTGCT
TCGACTTTTGAATGACCCCGGAGGAAGCAGCAGCGGCGGCTGCTGCGGCA
GCGGCAGAAGAGGCTGCCAAGGCGGCGGGAGCGGGCAGTGGGGCCCCTCC
AGGGATGGAGGAGGCGGCCGAGGCGGTGGTGAAGAGCTCCTTGTCCTTTG
CCGTGGTGATTATCATCCTACTGGTCTGTGCGGGCCTAGCTGCGGCCTTG
GTATACTTGCAGCGGAAGCGACACGAGACCTCTTCCCTCCTCTCGGGCCT
CGATAATCGCTACGACGACATCCTGGACCGTCTGCAGGAAATTGGGGATC
AATTTGATGACACCATGGAAAAAGCCGAGGAAGAGCCGTCTACACTCGAG
AAACGCAATGCCCTGATCAAACGAGCCGCAGCCGTCATTCCCATCGTGAG
GGTTGTGCAGCAGGAGATGCAGCAGAAGCAGGTGCTTTACCGGGAAGGCA
AGATGCGCGCGGAAGATTTTGAAAGCTTGCACCGGCTGAAGGGCGCAATT
GACGAGGAGACGGAGGTGATCCGTCAGATTGCCGAGGAGATTAATCCCGG
CTTTGGCCAACGGATCTTCTCCATGGTAGCTTCCTCGCAACACTTCCAGC
TGCTCTTCATGATGGACAGCAACAGCAAGGCCTACGAGACGGCGCTAGCC
GAAAACCCCGATAAGGCCGAACAGAAGCTCCTCCTCATCATCCACCGAGC
CATGCCCTGCTTCGACTTTTGAATGACCCCGGAGGAAGCAGCAGCGGCGG
CTGCTGCGGCAGCGGCAGAAGAGGCTGCCAAGGCGGCGGGAGCGGGCAGT
GGGGCCCCTCCAGGGATGGAGGAGGCGGCCGAGGCGGTGGTGAAGAGCTC
CTTGTCCTTTGCCGTGGTGATTATCATCCTACTGGTCTGTGCGGGCCTAG
CTGCGGCCTTGGTATACTTGCAGCGGAAGCGACACGAGACCTCTTCCCTC
CTCTCGGGCCTCGATAATCGCTACGACGACATCCTGGACCGTCTGCAGGA
AATTGGGGATCAATTTGATGACACCATGGAAAAAGCCGAGGAAGAGCCGT
CTACACTCGAGAAACGCAATGCCCTGATCAAACGAGCCGCAGCCGTCATT
CCCATCGTGAGGGTTGTGCAGCAGGAGATGCAGCAGAAGCAGGTGCTTTA
CCGGGAAGGCAAGATGCGCGCGGAAGATTTTGAAAGCTTGCACCGGCTGA
AGGGCGCAATTGACGAGGAGACGGAGGTGATCCGTCAGATTGCCGAGGAG
ATTAATCCCGGCTTTGGCCAACGGATCTTCTCCATGGTAGCTTCCTCGCA
ACACTTCCAGCTGCTCTTCATGATGGACAGCAACAGCAAGGCCTACGAGA
CGGCGCTAGCCGAAAACCCCGATAAGGCCGAACAGAAGCTCCTCCTCATC
ATCCACCGAGCCATGCCCTGCTTCGACTTTTGAATGACCCCGGAGGAAGC
AGCAGCGGCGGCTGCTGCGGCAGCGGCAGAAGAGGCTGCCAAGGCGGCGG
GAGCGGGCAGTGGGGCCCCTCCAGGGATGGAGGAGGCGGCCGAGGCGGTG
GTGAAGAGCTCCTTGTCCTTTGCCGTGGTGATTATCATCCTACTGGTCTG
TGCGGGCCTAGCTGCGGCCTTGGTATACTTGCAGCGGAAGCGACACGAGA
CCTCTTCCCTCCTCTCGGGCCTCGATAATCGCTACGACGACATCCTGGAC
CGTCTGCAGGAAATTGGGGATCAATTTGATGACACCATGGAAAAAGCCGA
GGAAGAGCCGTCTACACTCGAGAAACGCAATGCCCTGATCAAACGAGCCG
CAGCCGTCATTCCCATCGTGAGGGTTGTGCAGCAGGAGATGCAGCAGAAG
CAGGTGCTTTACCGGGAAGGCAAGATGCGCGCGGAAGATTTTGAAAGCTT
GCACCGGCTGAAGGGCGCAATTGACGAGGAGACGGAGGTGATCCGTCAGA
TTGCCGAGGAGATTAATCCCGGCTTTGGCCAACGGATCTTCTCCATGGTA
GCTTCCTCGCAACACTTCCAGCTGCTCTTCATGATGGACAGCAACAGCAA
GGCCTACGAGACGGCGCTAGCCGAAAACCCCGATAAGGCCGAACAGAAGC
TCCTCCTCATCATCCACCGAGCCATGCCCTGCTTCGACTTTTGAATGACC
CCGGAGGAAGCAGCAGCGGCGGCTGCTGCGGCAGCGGCAGAAGAGGCTGC
CAAGGCGGCGGGAGCGGGCAGTGGGGCCCCTCCAGGGATGGAGGAGGCGG
CCGAGGCGGTGGTGAAGAGCTCCTTGTCCTTTGCCGTGGTGATTATCATC
CTACTGGTCTGTGCGGGCCTAGCTGCGGCCTTGGTATACTTGCAGCGGAA
GCGACACGAGACCTCTTCCCTCCTCTCGGGCCTCGATAATCGCTACGACG
ACATCCTGGACCGTCTGCAGGAAATTGGGGATCAATTTGATGACACCATG
GAAAAAGCCGAGGAAGAGCCGTCTACACTCGAGAAACGCAATGCCCTGAT
CAAACGAGCCGCAGCCGTCATTCCCATCGTGAGGGTTGTGCAGCAGGAGA
TGCAGCAGAAGCAGGTGCTTTACCGGGAAGGCAAGATGCGCGCGGAAGAT
TTTGAAAGCTTGCACCGGCTGAAGGGCGCAATTGACGAGGAGACGGAGGT
GATCCGTCAGATTGCCGAGGAGATTAATCCCGGCTTTGGCCAACGGATCT
TCTCCATGGTAGCTTCCTCGCAACACTTCCAGCTGCTCTTCATGATGGAC
AGCAACAGCAAGGCCTACGAGACGGCGCTAGCCGAAAACCCCGATAAGGC
CGAACAGAAGCTCCTCCTCATCATCCACCGAGCCATGCCCTGCTTCGACT
TTTGAATGACCCCGGAGGAAGCAGCAGCGGCGGCTGCTGCGGCAGCGGCA
GAAGAGGCTGCCAAGGCGGCGGGAGCGGGCAGTGGGGCCCCTCCAGGGAT
GGAGGAGGCGGCCGAGGCGGTGGTGAAGAGCTCCTTGTCCTTTGCCGTGG
TGATTATCATCCTACTGGTCTGTGCGGGCCTAGCTGCGGCCTTGGTATAC
TTGCAGCGGAAGCGACACGAGACCTCTTCCCTCCTCTCGGGCCTCGATAA
TCGCTACGACGACATCCTGGACCGTCTGCAGGAAATTGGGGATCAATTTG
ATGACACCATGGAAAAAGCCGAGGAAGAGCCGTCTACACTCGAGAAACGC
AATGCCCTGATCAAACGAGCCGCAGCCGTCATTCCCATCGTGAGGGTTGT
GCAGCAGGAGATGCAGCAGAAGCAGGTGCTTTACCGGGAAGGCAAGATGC
GCGCGGAAGATTTTGAAAGCTTGCACCGGCTGAAGGGCGCAATTGACGAG
GAGACGGAGGTGATCCGTCAGATTGCCGAGGAGATTAATCCCGGCTTTGG
CCAACGGATCTTCTCCATGGTAGCTTCCTCGCAACACTTCCAGCTGCTCT
TCATGATGGACAGCAACAGCAAGGCCTACGAGACGGCGCTAGCCGAAAAC
CCCGATAAGGCCGAACAGAAGCTCCTCCTCATCATCCACCGAGCCATGCC
CTGCTTCGACTTTTGAATGACCCCGGAGGAAGCAGCAGCGGCGGCTGCTG
CGGCAGCGGCAGAAGAGGCTGCCAAGGCGGCGGGAGCGGGCAGTGGGGCC
CCTCCAGGGATGGAGGAGGCGGCCGAGGCGGTGGTGAAGAGCTCCTTGTC
CTTTGCCGTGGTGATTATCATCCTACTGGTCTGTGCGGGCCTAGCTGCGG
CCTTGGTATACTTGCAGCGGAAGCGACACGAGACCTCTTCCCTCCTCTCG
GGCCTCGATAATCGCTACGACGACATCCTGGACCGTCTGCAGGAAATTGG
GGATCAATTTGATGACACCATGGAAAAAGCCGAGGAAGAGCCGTCTACAC
TCGAGAAACGCAATGCCCTGATCAAACGAGCCGCAGCCGTCATTCCCATC
GTGAGGGTTGTGCAGCAGGAGATGCAGCAGAAGCAGGTGCTTTACCGGGA
AGGCAAGATGCGCGCGGAAGATTTTGAAAGCTTGCACCGGCTGAAGGGCG
CAATTGACGAGGAGACGGAGGTGATCCGTCAGATTGCCGAGGAGATTAAT
CCCGGCTTTGGCCAACGGATCTTCTCCATGGTAGCTTCCTCGCAACACTT
CCAGCTGCTCTTCATGATGGACAGCAACAGCAAGGCCTACGAGACGGCGC
TAGCCGAAAACCCCGATAAGGCCGAACAGAAGCTCCTCCTCATCATCCAC
CGAGCCATGCCCTGCTTCGACTTTTGA back to top
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