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Properties
| Property Name | Value |
|---|
| TranscriptId | 603768 |
| Track | FilteredModels2 |
| ProteinId | 603682 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_27 | supercontig | scaffold_27:220378..222040 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8708 ID=mRNA_8708|Name=jgi.p|Nanoce1779_2|603682|organism=Nannochloropsis oceanica|type=mRNA|length=1123bp
CACGCGGATGCATTTGCTGAGGGGTAAGGAGAGAGGGGGGAAAGGAAAGC
AGAAAGGGGAGGAGGAGGAAGGATCATCACCAGGAAAGATGCGCGTATTC
TCACACTCCTCCTCACCTTCTTGTCTTTTATAGCATGGCCCTCTTCGAAG
CCGGGGAGCTGCGTCAGGCCGTGCTGGCTTTCGAAGCGGAGGTGCAACGA
GCTCCACACAATGCCGAGGCCTGGCGCATGCTCGGCATGACCCACGCCGA
GAATGACGAGGACAAGCGGGCAATCGCCTGTCTGGAGCGCGCCGTCGACC
ACGACCCCCACTCGCTCCCCACCCTTCTCGCCCTCGGCGTCAGCTACGTC
AACGAGCTGGACTCGGTACGAGCTCTGCAGAACCTCAAGGCCTGGATCGA
GCACAACCCCAAGTACCAGGGCCTGGAAATCCGCGTAGACGAGTACAGCG
ACGGCTCTCTCATGGACGAAGTGATGCAGCTTATGCTGCAGGCCCATGAC
TGGGACCAGGCCACTAGCGGACCGGGCGGCCAGGGTAGCGACGCGGACGT
GCAGATCGTCCTCGGCGTGCTCTACAATGTCTCGCACGACTTTGACTCGG
CAACGGCAGCTTTCAGGCAGGCTTTGCTCTCGAGGCCCAGCGATTACTCC
CTGTGGAACAAGCTGGGTGCCACGCTCGCCAACAGCCAGCGGTCTCAAGA
AGCACTTCCTGCTTACCACCGTGCCCTTGACATCAAACCCAAATATGCAC
GAGGCTGGTTGAACCTGGGAATCTCGCATGCTAATCTCTCCAGCTTCGAT
GAGGCCGCCAAGTGCTACCTCCAAGCTTTGCGGCTGAACCCTGAGGCAAT
GCACATCTGGGGCTACCTGCGGGTGACATTCACGTCCATGGAGCGTTTTG
ACCTCGTCCAGTTGGCGGGTCAGCAAGATCCAAGCGTGTTTGATGCGGAA
TTCGGTCGGTAGAAGAAAAGAGGGAGGCAACCAAGTAGGAGTTAAAATTT
TAATTGTTGGGAACGATCCAATTTTATATACAGGACGGGAAGGATAGGGA
AAGTCAGCATACGCAGCTGCAGGTTTGTGATTAGAAGAAAAAGCTTAAAA
GGAAATTCAACAATACAGACATA back to topprotein sequence of jgi.p|Nanoce1779_2|603682 >mRNA_8708-protein ID=mRNA_8708-protein|Name=jgi.p|Nanoce1779_2|603682|organism=Nannochloropsis oceanica|type=polypeptide|length=276bp
MALFEAGELRQAVLAFEAEVQRAPHNAEAWRMLGMTHAENDEDKRAIACL
ERAVDHDPHSLPTLLALGVSYVNELDSVRALQNLKAWIEHNPKYQGLEIR
VDEYSDGSLMDEVMQLMLQAHDWDQATSGPGGQGSDADVQIVLGVLYNVS
HDFDSATAAFRQALLSRPSDYSLWNKLGATLANSQRSQEALPAYHRALDI
KPKYARGWLNLGISHANLSSFDEAAKCYLQALRLNPEAMHIWGYLRVTFT
SMERFDLVQLAGQQDPSVFDAEFGR* back to topmRNA from alignment at scaffold_27:220378..222040- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8708 ID=mRNA_8708|Name=jgi.p|Nanoce1779_2|603682|organism=Nannochloropsis oceanica|type=mRNA|length=1663bp|location=Sequence derived from alignment at scaffold_27:220378..222040- (Nannochloropsis oceanica)
CACGCGGATGCATTTGCTGAGGGGTAAGGAGAGAGGGGGGAAAGGAAAGC
AGAAAGGGGAGGAGGAGGAAGGATCATCACCAGGAAAGATGCGCGTATTC
TCACACTCCTCCTCACCTTCTTGTCTTTTATAGCATGGCCCTCTTCGAAG
CCGGGGAGCTGCGTCAGGCCGTGCTGGCTTTCGAAGCGGAGGTGCAACGA
GCTCCACACAATGCCGAGGCCTGGCGCATGCTCGGTACGTCTCATGTCAT
CAACACTTCACGTGGACATCAGCTTCTTACCTTCGTCTTCACCACTTTCC
TGTCTTCATTGAGTTTTCTTTCTCCCTTCTCGCCCATTTAACATCCACTT
CCTCCTTTTCCCCTTCTACGCCCAGGCATGACCCACGCCGAGAATGACGA
GGACAAGCGGGCAATCGCCTGTCTGGAGCGCGCCGTCGACCACGACCCCC
ACTCGCTCCCCACCCTTCTCGCCCTCGGCGTCAGCTACGTCAACGAGCTG
GACTCGGTACGAGCTCTGCAGAACCTCAAGGCCTGGATCGAGCACAACCC
CAAGTACCAGGTACGTCCCTTCCTACACCCACACTCTCTCCATCTGATCG
CTCTGCTTCCTTCGAGCTTATTTCGCACGACATGCAGTCGATGGTGCATT
GATGTACGACTTCCTGGGGCTTTCTTTCCTCTCTTGCTTTCGTAGGGCCT
GGAAATCCGCGTAGACGAGTACAGCGACGGCTCTCTCATGGACGAAGTGA
TGCAGCTTATGCTGCAGGCCCATGACTGGGACCAGGCCACTAGCGGACCG
GGCGGCCAGGGTAGCGACGCGGACGTGCAGATCGTCCTCGGCGTGCTCTA
CAATGTCTCGCACGACTTTGACTCGGCAACGGCAGCTTTCAGGCAGGCTT
TGCTCTCGAGGCCCAGGTAGGGAAGGAGGAAGAAGCTGATGAAGGGAAAA
AGGTCGGCGTGAAAGTGTGTAGGAATGATTATTATTTTCTCATTTGTTCG
CGATCTCTCCCTCGCTACCTTGCTCTCTCCGTCTCGCAGCGATTACTCCC
TGTGGAACAAGCTGGGTGCCACGCTCGCCAACAGCCAGCGGTCTCAAGAA
GCACTTCCTGCTTACCACCGTGCCCTTGACATCAAACCCAAATATGCACG
AGGCTGGTTGAACCTGGGAATCTCGCATGCTAATCTCTCCAGGTGAGTAG
AGTGTCTTTCTCCTCTACCTTATTTGACGGAGCCACCCTCAAATTGGGAC
CATGGCATATCTGTCTTCTCCACACCTTCCTCACCCATCCCACTTGTCCT
TTCCGCCCTTCCTCTCATGGGCATGCCCAACAGCTTCGATGAGGCCGCCA
AGTGCTACCTCCAAGCTTTGCGGCTGAACCCTGAGGCAATGCACATCTGG
GGCTACCTGCGGGTGACATTCACGTCCATGGAGCGTTTTGACCTCGTCCA
GTTGGCGGGTCAGCAAGATCCAAGCGTGTTTGATGCGGAATTCGGTCGGT
AGAAGAAAAGAGGGAGGCAACCAAGTAGGAGTTAAAATTTTAATTGTTGG
GAACGATCCAATTTTATATACAGGACGGGAAGGATAGGGAAAGTCAGCAT
ACGCAGCTGCAGGTTTGTGATTAGAAGAAAAAGCTTAAAAGGAAATTCAA
CAATACAGACATA back to topCoding sequence (CDS) from alignment at scaffold_27:220378..222040- >mRNA_8708 ID=mRNA_8708|Name=jgi.p|Nanoce1779_2|603682|organism=Nannochloropsis oceanica|type=CDS|length=4140bp|location=Sequence derived from alignment at scaffold_27:220378..222040- (Nannochloropsis oceanica)
CTTCGATGAGGCCGCCAAGTGCTACCTCCAAGCTTTGCGGCTGAACCCTG
AGGCAATGCACATCTGGGGCTACCTGCGGGTGACATTCACGTCCATGGAG
CGTTTTGACCTCGTCCAGTTGGCGGGTCAGCAAGATCCAAGCGTGTTTGA
TGCGGAATTCGGTCGGTAGCGATTACTCCCTGTGGAACAAGCTGGGTGCC
ACGCTCGCCAACAGCCAGCGGTCTCAAGAAGCACTTCCTGCTTACCACCG
TGCCCTTGACATCAAACCCAAATATGCACGAGGCTGGTTGAACCTGGGAA
TCTCGCATGCTAATCTCTCCAGGGCCTGGAAATCCGCGTAGACGAGTACA
GCGACGGCTCTCTCATGGACGAAGTGATGCAGCTTATGCTGCAGGCCCAT
GACTGGGACCAGGCCACTAGCGGACCGGGCGGCCAGGGTAGCGACGCGGA
CGTGCAGATCGTCCTCGGCGTGCTCTACAATGTCTCGCACGACTTTGACT
CGGCAACGGCAGCTTTCAGGCAGGCTTTGCTCTCGAGGCCCAGGCATGAC
CCACGCCGAGAATGACGAGGACAAGCGGGCAATCGCCTGTCTGGAGCGCG
CCGTCGACCACGACCCCCACTCGCTCCCCACCCTTCTCGCCCTCGGCGTC
AGCTACGTCAACGAGCTGGACTCGGTACGAGCTCTGCAGAACCTCAAGGC
CTGGATCGAGCACAACCCCAAGTACCAGATGGCCCTCTTCGAAGCCGGGG
AGCTGCGTCAGGCCGTGCTGGCTTTCGAAGCGGAGGTGCAACGAGCTCCA
CACAATGCCGAGGCCTGGCGCATGCTCGCTTCGATGAGGCCGCCAAGTGC
TACCTCCAAGCTTTGCGGCTGAACCCTGAGGCAATGCACATCTGGGGCTA
CCTGCGGGTGACATTCACGTCCATGGAGCGTTTTGACCTCGTCCAGTTGG
CGGGTCAGCAAGATCCAAGCGTGTTTGATGCGGAATTCGGTCGGTAGCGA
TTACTCCCTGTGGAACAAGCTGGGTGCCACGCTCGCCAACAGCCAGCGGT
CTCAAGAAGCACTTCCTGCTTACCACCGTGCCCTTGACATCAAACCCAAA
TATGCACGAGGCTGGTTGAACCTGGGAATCTCGCATGCTAATCTCTCCAG
GGCCTGGAAATCCGCGTAGACGAGTACAGCGACGGCTCTCTCATGGACGA
AGTGATGCAGCTTATGCTGCAGGCCCATGACTGGGACCAGGCCACTAGCG
GACCGGGCGGCCAGGGTAGCGACGCGGACGTGCAGATCGTCCTCGGCGTG
CTCTACAATGTCTCGCACGACTTTGACTCGGCAACGGCAGCTTTCAGGCA
GGCTTTGCTCTCGAGGCCCAGGCATGACCCACGCCGAGAATGACGAGGAC
AAGCGGGCAATCGCCTGTCTGGAGCGCGCCGTCGACCACGACCCCCACTC
GCTCCCCACCCTTCTCGCCCTCGGCGTCAGCTACGTCAACGAGCTGGACT
CGGTACGAGCTCTGCAGAACCTCAAGGCCTGGATCGAGCACAACCCCAAG
TACCAGATGGCCCTCTTCGAAGCCGGGGAGCTGCGTCAGGCCGTGCTGGC
TTTCGAAGCGGAGGTGCAACGAGCTCCACACAATGCCGAGGCCTGGCGCA
TGCTCGCTTCGATGAGGCCGCCAAGTGCTACCTCCAAGCTTTGCGGCTGA
ACCCTGAGGCAATGCACATCTGGGGCTACCTGCGGGTGACATTCACGTCC
ATGGAGCGTTTTGACCTCGTCCAGTTGGCGGGTCAGCAAGATCCAAGCGT
GTTTGATGCGGAATTCGGTCGGTAGCGATTACTCCCTGTGGAACAAGCTG
GGTGCCACGCTCGCCAACAGCCAGCGGTCTCAAGAAGCACTTCCTGCTTA
CCACCGTGCCCTTGACATCAAACCCAAATATGCACGAGGCTGGTTGAACC
TGGGAATCTCGCATGCTAATCTCTCCAGGGCCTGGAAATCCGCGTAGACG
AGTACAGCGACGGCTCTCTCATGGACGAAGTGATGCAGCTTATGCTGCAG
GCCCATGACTGGGACCAGGCCACTAGCGGACCGGGCGGCCAGGGTAGCGA
CGCGGACGTGCAGATCGTCCTCGGCGTGCTCTACAATGTCTCGCACGACT
TTGACTCGGCAACGGCAGCTTTCAGGCAGGCTTTGCTCTCGAGGCCCAGG
CATGACCCACGCCGAGAATGACGAGGACAAGCGGGCAATCGCCTGTCTGG
AGCGCGCCGTCGACCACGACCCCCACTCGCTCCCCACCCTTCTCGCCCTC
GGCGTCAGCTACGTCAACGAGCTGGACTCGGTACGAGCTCTGCAGAACCT
CAAGGCCTGGATCGAGCACAACCCCAAGTACCAGATGGCCCTCTTCGAAG
CCGGGGAGCTGCGTCAGGCCGTGCTGGCTTTCGAAGCGGAGGTGCAACGA
GCTCCACACAATGCCGAGGCCTGGCGCATGCTCGCTTCGATGAGGCCGCC
AAGTGCTACCTCCAAGCTTTGCGGCTGAACCCTGAGGCAATGCACATCTG
GGGCTACCTGCGGGTGACATTCACGTCCATGGAGCGTTTTGACCTCGTCC
AGTTGGCGGGTCAGCAAGATCCAAGCGTGTTTGATGCGGAATTCGGTCGG
TAGCGATTACTCCCTGTGGAACAAGCTGGGTGCCACGCTCGCCAACAGCC
AGCGGTCTCAAGAAGCACTTCCTGCTTACCACCGTGCCCTTGACATCAAA
CCCAAATATGCACGAGGCTGGTTGAACCTGGGAATCTCGCATGCTAATCT
CTCCAGGGCCTGGAAATCCGCGTAGACGAGTACAGCGACGGCTCTCTCAT
GGACGAAGTGATGCAGCTTATGCTGCAGGCCCATGACTGGGACCAGGCCA
CTAGCGGACCGGGCGGCCAGGGTAGCGACGCGGACGTGCAGATCGTCCTC
GGCGTGCTCTACAATGTCTCGCACGACTTTGACTCGGCAACGGCAGCTTT
CAGGCAGGCTTTGCTCTCGAGGCCCAGGCATGACCCACGCCGAGAATGAC
GAGGACAAGCGGGCAATCGCCTGTCTGGAGCGCGCCGTCGACCACGACCC
CCACTCGCTCCCCACCCTTCTCGCCCTCGGCGTCAGCTACGTCAACGAGC
TGGACTCGGTACGAGCTCTGCAGAACCTCAAGGCCTGGATCGAGCACAAC
CCCAAGTACCAGATGGCCCTCTTCGAAGCCGGGGAGCTGCGTCAGGCCGT
GCTGGCTTTCGAAGCGGAGGTGCAACGAGCTCCACACAATGCCGAGGCCT
GGCGCATGCTCGCTTCGATGAGGCCGCCAAGTGCTACCTCCAAGCTTTGC
GGCTGAACCCTGAGGCAATGCACATCTGGGGCTACCTGCGGGTGACATTC
ACGTCCATGGAGCGTTTTGACCTCGTCCAGTTGGCGGGTCAGCAAGATCC
AAGCGTGTTTGATGCGGAATTCGGTCGGTAGCGATTACTCCCTGTGGAAC
AAGCTGGGTGCCACGCTCGCCAACAGCCAGCGGTCTCAAGAAGCACTTCC
TGCTTACCACCGTGCCCTTGACATCAAACCCAAATATGCACGAGGCTGGT
TGAACCTGGGAATCTCGCATGCTAATCTCTCCAGGGCCTGGAAATCCGCG
TAGACGAGTACAGCGACGGCTCTCTCATGGACGAAGTGATGCAGCTTATG
CTGCAGGCCCATGACTGGGACCAGGCCACTAGCGGACCGGGCGGCCAGGG
TAGCGACGCGGACGTGCAGATCGTCCTCGGCGTGCTCTACAATGTCTCGC
ACGACTTTGACTCGGCAACGGCAGCTTTCAGGCAGGCTTTGCTCTCGAGG
CCCAGGCATGACCCACGCCGAGAATGACGAGGACAAGCGGGCAATCGCCT
GTCTGGAGCGCGCCGTCGACCACGACCCCCACTCGCTCCCCACCCTTCTC
GCCCTCGGCGTCAGCTACGTCAACGAGCTGGACTCGGTACGAGCTCTGCA
GAACCTCAAGGCCTGGATCGAGCACAACCCCAAGTACCAGATGGCCCTCT
TCGAAGCCGGGGAGCTGCGTCAGGCCGTGCTGGCTTTCGAAGCGGAGGTG
CAACGAGCTCCACACAATGCCGAGGCCTGGCGCATGCTCG back to top
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