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Properties
| Property Name | Value |
|---|
| TranscriptId | 603751 |
| Track | FilteredModels2 |
| ProteinId | 603665 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_27 | supercontig | scaffold_27:210363..211421 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8704 ID=mRNA_8704|Name=jgi.p|Nanoce1779_2|603665|organism=Nannochloropsis oceanica|type=mRNA|length=757bp
ACAGCAGCCATGGTACCACAAGCCGCTCCACTAGCATTTAGAACCCGCCA
CGTCGCCCTTCTTCTTGTAGTCCTCGTCATCGCCTTGCTTGCTGCGACCG
CGTCGTCCTCGTCCGCGTCTTCGCCCCTTGGGTTTGTACCCTCTACACAG
CAGCTCCAGCAGACCTCCTCCTCGAGCTCCACTTCATGCTGCGGTGGTCG
GCACCCTGCTTCTCCCGCGCACCAGCACTTCCACGCAAGCCGTGCCGCAA
TCACAACGAAGCGACACGCGCTCCCACCTTTTGACAGCCCCCTCGATCCC
GCCACCTTGGAGAGCATGGCTGCCACTGCTGCTGCGTCCTCCGCTGCCGC
TAGTGCCGGCGGGGCTATTCACGAAGTCACTCCCGAGCAGCTTTGGGTTG
GTTTTATCGCTGGCGTCTTCCCTTTCATCTGGGCAGGGTACGAATTCTGG
AAACGCATCGATACACAGCAACGGTGTGGGGTCTGTCAAGGCTCGGGTCT
AGTGTACGAAAGCGCGACGGGTAAAAGTCTCACTACAGCCCGAAAGTGCT
ACGCGTGTGGTGGTTTTTTGCCGTGGGCAGGTTGGAAGCGGTTCTGGCTG
AGCAATCTGGACATTGGAAATGGAGGTGTACTGCAGCGACCCGCCCCGGA
TTATGAAGCCTTGAGTGAGGCGGCGAAGAGGAGGAGGGCGGGAGGGAAGG
AGGGGAAAGACTAGACCGAAAAGAAGAGCGAACGAAAGTGTGTACCACAG
ATAGAAC back to topprotein sequence of jgi.p|Nanoce1779_2|603665 >mRNA_8704-protein ID=mRNA_8704-protein|Name=jgi.p|Nanoce1779_2|603665|organism=Nannochloropsis oceanica|type=polypeptide|length=235bp
MVPQAAPLAFRTRHVALLLVVLVIALLAATASSSSASSPLGFVPSTQQLQ
QTSSSSSTSCCGGRHPASPAHQHFHASRAAITTKRHALPPFDSPLDPATL
ESMAATAAASSAAASAGGAIHEVTPEQLWVGFIAGVFPFIWAGYEFWKRI
DTQQRCGVCQGSGLVYESATGKSLTTARKCYACGGFLPWAGWKRFWLSNL
DIGNGGVLQRPAPDYEALSEAAKRRRAGGKEGKD* back to topmRNA from alignment at scaffold_27:210363..211421- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8704 ID=mRNA_8704|Name=jgi.p|Nanoce1779_2|603665|organism=Nannochloropsis oceanica|type=mRNA|length=1059bp|location=Sequence derived from alignment at scaffold_27:210363..211421- (Nannochloropsis oceanica)
ACAGCAGCCATGGTACCACAAGCCGCTCCACTAGCATTTAGAACCCGCCA
CGTCGCCCTTCTTCTTGTAGTCCTCGTCATCGCCTTGCTTGCTGCGACCG
CGTCGTCCTCGTCCGCGTCTTCGCCCCTTGGGTTTGTACCCTCTACACAG
CAGCTCCAGCAGACCTCCTCCTCGAGCTCCACTTCATGCTGCGGTGGTCG
GCACCCTGCTTCTCCCGCGCACCAGCACTTCCACGCAAGCCGTGCCGCAA
TCACAACGAAGCGACACGCGCTCCCACCTTTTGACAGCCCCCTCGATCCC
GCCACCTTGGAGAGCATGGCTGCCACTGCTGCTGCGTCCTCCGCTGCCGC
TAGTGCCGGCGGGGCTATTCACGAAGTCACTCCCGAGCAGCTTTGGGTAA
GTTTTCGTGTGTATATGCGTGCGCTTGGTGGGACGACTAATTGTCCTCTC
AAAGTATTCATGTCGACCCCTCTCCTCCCCCCTCTCTCCCAGGTTGGTTT
TATCGCTGGCGTCTTCCCTTTCATCTGGGCAGGGTACGAATTCTGGAAAC
GCATCGATACACAGCAACGGTGTGGGGTCTGTCAAGGCTCGGGTCTAGTG
TACGAAAGCGCGACGGGTAAAAGTCTCACTACAGCCCGAAAGTGCTACGC
GTGTGGTGGTTTTTTGCCGGTGAGGAAGGAGGGAGAGAGGGAGGGAGGGA
GGCGTATCTTTTGTAAGACACCACAAGTGACATAATTATCATTGATGTCG
TCGTCATCATCATCATCATCATCATCATCGTCATCATCTTCACCACAGTA
ACTGTTCCATTTTGCCCACACCCTTTCTCACATTTCCCCTAATCCCTCCC
TCCCTCGCTCTTTCCCGGCCTCCAGTGGGCAGGTTGGAAGCGGTTCTGGC
TGAGCAATCTGGACATTGGAAATGGAGGTGTACTGCAGCGACCCGCCCCG
GATTATGAAGCCTTGAGTGAGGCGGCGAAGAGGAGGAGGGCGGGAGGGAA
GGAGGGGAAAGACTAGACCGAAAAGAAGAGCGAACGAAAGTGTGTACCAC
AGATAGAAC back to topCoding sequence (CDS) from alignment at scaffold_27:210363..211421- >mRNA_8704 ID=mRNA_8704|Name=jgi.p|Nanoce1779_2|603665|organism=Nannochloropsis oceanica|type=CDS|length=2115bp|location=Sequence derived from alignment at scaffold_27:210363..211421- (Nannochloropsis oceanica)
TGGGCAGGTTGGAAGCGGTTCTGGCTGAGCAATCTGGACATTGGAAATGG
AGGTGTACTGCAGCGACCCGCCCCGGATTATGAAGCCTTGAGTGAGGCGG
CGAAGAGGAGGAGGGCGGGAGGGAAGGAGGGGAAAGACTAGGTTGGTTTT
ATCGCTGGCGTCTTCCCTTTCATCTGGGCAGGGTACGAATTCTGGAAACG
CATCGATACACAGCAACGGTGTGGGGTCTGTCAAGGCTCGGGTCTAGTGT
ACGAAAGCGCGACGGGTAAAAGTCTCACTACAGCCCGAAAGTGCTACGCG
TGTGGTGGTTTTTTGCCGATGGTACCACAAGCCGCTCCACTAGCATTTAG
AACCCGCCACGTCGCCCTTCTTCTTGTAGTCCTCGTCATCGCCTTGCTTG
CTGCGACCGCGTCGTCCTCGTCCGCGTCTTCGCCCCTTGGGTTTGTACCC
TCTACACAGCAGCTCCAGCAGACCTCCTCCTCGAGCTCCACTTCATGCTG
CGGTGGTCGGCACCCTGCTTCTCCCGCGCACCAGCACTTCCACGCAAGCC
GTGCCGCAATCACAACGAAGCGACACGCGCTCCCACCTTTTGACAGCCCC
CTCGATCCCGCCACCTTGGAGAGCATGGCTGCCACTGCTGCTGCGTCCTC
CGCTGCCGCTAGTGCCGGCGGGGCTATTCACGAAGTCACTCCCGAGCAGC
TTTGGTGGGCAGGTTGGAAGCGGTTCTGGCTGAGCAATCTGGACATTGGA
AATGGAGGTGTACTGCAGCGACCCGCCCCGGATTATGAAGCCTTGAGTGA
GGCGGCGAAGAGGAGGAGGGCGGGAGGGAAGGAGGGGAAAGACTAGGTTG
GTTTTATCGCTGGCGTCTTCCCTTTCATCTGGGCAGGGTACGAATTCTGG
AAACGCATCGATACACAGCAACGGTGTGGGGTCTGTCAAGGCTCGGGTCT
AGTGTACGAAAGCGCGACGGGTAAAAGTCTCACTACAGCCCGAAAGTGCT
ACGCGTGTGGTGGTTTTTTGCCGATGGTACCACAAGCCGCTCCACTAGCA
TTTAGAACCCGCCACGTCGCCCTTCTTCTTGTAGTCCTCGTCATCGCCTT
GCTTGCTGCGACCGCGTCGTCCTCGTCCGCGTCTTCGCCCCTTGGGTTTG
TACCCTCTACACAGCAGCTCCAGCAGACCTCCTCCTCGAGCTCCACTTCA
TGCTGCGGTGGTCGGCACCCTGCTTCTCCCGCGCACCAGCACTTCCACGC
AAGCCGTGCCGCAATCACAACGAAGCGACACGCGCTCCCACCTTTTGACA
GCCCCCTCGATCCCGCCACCTTGGAGAGCATGGCTGCCACTGCTGCTGCG
TCCTCCGCTGCCGCTAGTGCCGGCGGGGCTATTCACGAAGTCACTCCCGA
GCAGCTTTGGTGGGCAGGTTGGAAGCGGTTCTGGCTGAGCAATCTGGACA
TTGGAAATGGAGGTGTACTGCAGCGACCCGCCCCGGATTATGAAGCCTTG
AGTGAGGCGGCGAAGAGGAGGAGGGCGGGAGGGAAGGAGGGGAAAGACTA
GGTTGGTTTTATCGCTGGCGTCTTCCCTTTCATCTGGGCAGGGTACGAAT
TCTGGAAACGCATCGATACACAGCAACGGTGTGGGGTCTGTCAAGGCTCG
GGTCTAGTGTACGAAAGCGCGACGGGTAAAAGTCTCACTACAGCCCGAAA
GTGCTACGCGTGTGGTGGTTTTTTGCCGATGGTACCACAAGCCGCTCCAC
TAGCATTTAGAACCCGCCACGTCGCCCTTCTTCTTGTAGTCCTCGTCATC
GCCTTGCTTGCTGCGACCGCGTCGTCCTCGTCCGCGTCTTCGCCCCTTGG
GTTTGTACCCTCTACACAGCAGCTCCAGCAGACCTCCTCCTCGAGCTCCA
CTTCATGCTGCGGTGGTCGGCACCCTGCTTCTCCCGCGCACCAGCACTTC
CACGCAAGCCGTGCCGCAATCACAACGAAGCGACACGCGCTCCCACCTTT
TGACAGCCCCCTCGATCCCGCCACCTTGGAGAGCATGGCTGCCACTGCTG
CTGCGTCCTCCGCTGCCGCTAGTGCCGGCGGGGCTATTCACGAAGTCACT
CCCGAGCAGCTTTGG back to top
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