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Properties
| Property Name | Value |
|---|
| TranscriptId | 603712 |
| Track | FilteredModels2 |
| ProteinId | 603626 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_27 | supercontig | scaffold_27:179799..181216 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8693 ID=mRNA_8693|Name=jgi.p|Nanoce1779_2|603626|organism=Nannochloropsis oceanica|type=mRNA|length=1418bp
AACCATAGGGAACACACATGGATCCCGTCCAGGTGGCCTCACTGGAGCGG
TATTTGCCCCAAGTTCTCCCCGCAGCACTTCTGCGTTCCCCGGCCTCTTC
ACCGACCTCCTTCCCCCTGCCTCCCCTCAAGATCAGAGCCACCATACTTG
AAGGCGGCCAGAGCAACCCCACGTTTCTACTCACGCTGCAGCCGTCAGGG
GATCGTATCGTGCTGAGAAAGAAACCGGCACTTGTCAAGGTGGCGTCGGC
GCACGCAGTAGAGAGGGAATACCGGGTGCTCCAAGCCTTGCAACATTCGG
CCGTGCCCGTCCCACCAGTCTACCTCTTATGCGATGATGCCTCGATAGTG
GGTACTCCCTTTTACCTTATGGGTTTTGTCGAAGGGCGTGTTTTTCGCGA
CCCGACCTTGCCAGGCGTAAAGGATCCAAAGGAGAGGAGGGAGTGCTTCC
AGGCCATGCTGGAGACATTAGCCGCTATTCATACAGTAGATTGGCGGGGA
AGGGGCCTGGGGACTTTTGGAAAGCCGGAAGTTGGTTATTTTGGTCGGCA
GCTTAAGAGACTGAAAAGTGTGATGGAGAAGCAGGCGGAGGACGCGGGTT
ACTTTCCCGGATCAAGGGAGTTAAGTGAGGATATGCTAAGGGTGGTAGCA
CAACCTGGAGGGGCAGTGAGGGATGATGAGACTTGTTTGGTGCATGGCGA
TTATAAGGTAAAGTATTTTCTTGAAAAGGGAGAGTGGGCGCGGGGGCGCG
CGGGGGCGGGGGGGATATTGTCCAGGGATGCGTGATGGTTCTCCCTGCCC
CCATTCAAAGCTTGCATCCCACTACATAATCCTCACGCCGGCACGCGTAC
GAAACCCAAACACGTTGCTGTCTCTCTCGCACAGATAGATAATGTGGTCT
TTCACCCTAGTGAGCCGCGGGTCGTCGCTGTGCTCGACTGGGAGCTTTCT
ACCCTTGGGCATCCCATGGCCGACCTCGCCAATCTCTCAATGATGTTTTT
TGTCCCTTCGGTCCCTCACTCCCCGGTCTCGGGCTTGCTAGGGCTAGAGT
TAGACCAGTTAGGCATCCCAGATGAAGAGGATTTGGTGAAAGAGTACTGC
CAGCTGGTAGGGAGGAAGCCTCCGGGGAGGGAGTGGAGGTTCTACACGGC
CTTCTTGTTCTTCAAGAATGTGGTGGTCTTGCAAGGGGTCGAGGCGAGAA
GGCGACAGGGCGTGGCCTCATCAAAGCTGGCTGTGAAACTTCTAGATCTA
GCTCCGATTCTGGTGCAGATTGCGGCACAGCATTTGGAGGAGGCGCAAGA
AGCTGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAG
GAATTAGAGTAAGCAACACAGCAGGAGTAGCAGAAGGAGCAAACTTTCCT
TCTCCACACCTTCAAGAA back to topprotein sequence of jgi.p|Nanoce1779_2|603626 >mRNA_8693-protein ID=mRNA_8693-protein|Name=jgi.p|Nanoce1779_2|603626|organism=Nannochloropsis oceanica|type=polypeptide|length=256bp
MDPVQVASLERYLPQVLPAALLRSPASSPTSFPLPPLKIRATILEGGQSN
PTFLLTLQPSGDRIVLRKKPALVKVASAHAVEREYRVLQALQHSAVPVPP
VYLLCDDASIVGTPFYLMGFVEGRVFRDPTLPGVKDPKERRECFQAMLET
LAAIHTVDWRGRGLGTFGKPEVGYFGRQLKRLKSVMEKQAEDAGYFPGSR
ELSEDMLRVVAQPGGAVRDDETCLVHGDYKVKYFLEKGEWARGRAGAGGI
LSRDA* back to topmRNA from alignment at scaffold_27:179799..181216- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8693 ID=mRNA_8693|Name=jgi.p|Nanoce1779_2|603626|organism=Nannochloropsis oceanica|type=mRNA|length=1418bp|location=Sequence derived from alignment at scaffold_27:179799..181216- (Nannochloropsis oceanica)
AACCATAGGGAACACACATGGATCCCGTCCAGGTGGCCTCACTGGAGCGG
TATTTGCCCCAAGTTCTCCCCGCAGCACTTCTGCGTTCCCCGGCCTCTTC
ACCGACCTCCTTCCCCCTGCCTCCCCTCAAGATCAGAGCCACCATACTTG
AAGGCGGCCAGAGCAACCCCACGTTTCTACTCACGCTGCAGCCGTCAGGG
GATCGTATCGTGCTGAGAAAGAAACCGGCACTTGTCAAGGTGGCGTCGGC
GCACGCAGTAGAGAGGGAATACCGGGTGCTCCAAGCCTTGCAACATTCGG
CCGTGCCCGTCCCACCAGTCTACCTCTTATGCGATGATGCCTCGATAGTG
GGTACTCCCTTTTACCTTATGGGTTTTGTCGAAGGGCGTGTTTTTCGCGA
CCCGACCTTGCCAGGCGTAAAGGATCCAAAGGAGAGGAGGGAGTGCTTCC
AGGCCATGCTGGAGACATTAGCCGCTATTCATACAGTAGATTGGCGGGGA
AGGGGCCTGGGGACTTTTGGAAAGCCGGAAGTTGGTTATTTTGGTCGGCA
GCTTAAGAGACTGAAAAGTGTGATGGAGAAGCAGGCGGAGGACGCGGGTT
ACTTTCCCGGATCAAGGGAGTTAAGTGAGGATATGCTAAGGGTGGTAGCA
CAACCTGGAGGGGCAGTGAGGGATGATGAGACTTGTTTGGTGCATGGCGA
TTATAAGGTAAAGTATTTTCTTGAAAAGGGAGAGTGGGCGCGGGGGCGCG
CGGGGGCGGGGGGGATATTGTCCAGGGATGCGTGATGGTTCTCCCTGCCC
CCATTCAAAGCTTGCATCCCACTACATAATCCTCACGCCGGCACGCGTAC
GAAACCCAAACACGTTGCTGTCTCTCTCGCACAGATAGATAATGTGGTCT
TTCACCCTAGTGAGCCGCGGGTCGTCGCTGTGCTCGACTGGGAGCTTTCT
ACCCTTGGGCATCCCATGGCCGACCTCGCCAATCTCTCAATGATGTTTTT
TGTCCCTTCGGTCCCTCACTCCCCGGTCTCGGGCTTGCTAGGGCTAGAGT
TAGACCAGTTAGGCATCCCAGATGAAGAGGATTTGGTGAAAGAGTACTGC
CAGCTGGTAGGGAGGAAGCCTCCGGGGAGGGAGTGGAGGTTCTACACGGC
CTTCTTGTTCTTCAAGAATGTGGTGGTCTTGCAAGGGGTCGAGGCGAGAA
GGCGACAGGGCGTGGCCTCATCAAAGCTGGCTGTGAAACTTCTAGATCTA
GCTCCGATTCTGGTGCAGATTGCGGCACAGCATTTGGAGGAGGCGCAAGA
AGCTGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAG
GAATTAGAGTAAGCAACACAGCAGGAGTAGCAGAAGGAGCAAACTTTCCT
TCTCCACACCTTCAAGAA back to topCoding sequence (CDS) from alignment at scaffold_27:179799..181216- >mRNA_8693 ID=mRNA_8693|Name=jgi.p|Nanoce1779_2|603626|organism=Nannochloropsis oceanica|type=CDS|length=768bp|location=Sequence derived from alignment at scaffold_27:179799..181216- (Nannochloropsis oceanica)
ATGGATCCCGTCCAGGTGGCCTCACTGGAGCGGTATTTGCCCCAAGTTCT
CCCCGCAGCACTTCTGCGTTCCCCGGCCTCTTCACCGACCTCCTTCCCCC
TGCCTCCCCTCAAGATCAGAGCCACCATACTTGAAGGCGGCCAGAGCAAC
CCCACGTTTCTACTCACGCTGCAGCCGTCAGGGGATCGTATCGTGCTGAG
AAAGAAACCGGCACTTGTCAAGGTGGCGTCGGCGCACGCAGTAGAGAGGG
AATACCGGGTGCTCCAAGCCTTGCAACATTCGGCCGTGCCCGTCCCACCA
GTCTACCTCTTATGCGATGATGCCTCGATAGTGGGTACTCCCTTTTACCT
TATGGGTTTTGTCGAAGGGCGTGTTTTTCGCGACCCGACCTTGCCAGGCG
TAAAGGATCCAAAGGAGAGGAGGGAGTGCTTCCAGGCCATGCTGGAGACA
TTAGCCGCTATTCATACAGTAGATTGGCGGGGAAGGGGCCTGGGGACTTT
TGGAAAGCCGGAAGTTGGTTATTTTGGTCGGCAGCTTAAGAGACTGAAAA
GTGTGATGGAGAAGCAGGCGGAGGACGCGGGTTACTTTCCCGGATCAAGG
GAGTTAAGTGAGGATATGCTAAGGGTGGTAGCACAACCTGGAGGGGCAGT
GAGGGATGATGAGACTTGTTTGGTGCATGGCGATTATAAGGTAAAGTATT
TTCTTGAAAAGGGAGAGTGGGCGCGGGGGCGCGCGGGGGCGGGGGGGATA
TTGTCCAGGGATGCGTGA back to top
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