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Properties
| Property Name | Value |
|---|
| TranscriptId | 603669 |
| Track | FilteredModels2 |
| ProteinId | 603583 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_27 | supercontig | scaffold_27:157024..159698 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8681 ID=mRNA_8681|Name=jgi.p|Nanoce1779_2|603583|organism=Nannochloropsis oceanica|type=mRNA|length=2288bp
GCTGCGGCTGCTGCTGCTGCTGCTTGGTCATCCAGCTCGACGCCTTAGGG
CGCGGTGCCGCAGGTTCTTCCGAAAAAAAATTCTTGACAGAGCCCCACCA
AGACATACCTCGCAATGATCTGGCACTTTTATCGATCAAGTACCGATTGG
AATCCACAACGGCTTCGGCCCGGTCTAAGGACTCTTGCTGCCCCGCTACT
GCCGTCAGGGTTTCCCGCCCCATCGCTATGGACTCTTGCGCAACTCGTAG
GAAGCCGTTATATTCCTCCTCAGTCTTAAAATGGTGGGGTCTCTGTTGCT
GCTGCTGGTTGGTTTCCACGCTCCCATTGCCGCCGCCGCCGCCGCCTCCC
CACTCCATGCTTTGGAATCTGTGTGTTTCTGGTCGGGGTGATAGATGCGC
CGGGTTTGAATTAGGCCAAGGAAGGCAACACTTGCGACTCAAAATGAAGA
CCTATGGAAGACGCCGATGATGATGATGCGTTTGAGCCTCAACTTTGTTT
GTAATGCATTTTTTCTAGCAAAATACAGCATGACGAGCTCCTTATCGAGG
CCCAAGACTCCCACACCGGCCCGTAGCGGGGGGTGTAAAGGTCTGCAAAC
GTGCCGTCATTCAAGGACCGGCCGCCTTGACCCTCGCCAAAATCGTGCAT
TCTGCGCGCTTACCTATCTCGTCGTCTACTCCCATAACACAAAACACATA
CACACAGCCAGCCATGGTGCTGGAGGAGGAGCGACAACAAGAAGGGATCG
ACTCCATGATCCTGGAAATGGTAACGGGCCCACCAGAGCAAGTGGCACCC
TGCATTCGCAACGCCCTCGAGCGTGGCTGGGAAAAAGCGCTTCCAGGGAC
CCTGATCGAGTTCCAACGACGGCGCAAGGAGGAAATTGAGCGGATCTGTA
GTCGGTACTACTCCGAATTTCTAGGTTCGGTCCAAGAGCTCCTGACAGCT
AAAAGCCGACTTGCCGCCTTGAAGCACCAAATTGTCCGATTCAACGAAGA
CATCAAGCTCACAGGACAGGGCACCCTCAGGACAGGCCACGAGCTCCAAC
GTCAAAAATTCGCCCACCGGAATGTGCAGGCTGCTATTATTGTGCTCGCG
CAATGCCGAGAGTTGACCTCGCTCCTGGCCTTGGCCAAGCAGCAGATCGA
GGAAGGGCGGCATTGCCCTGCCTTGAGGACGCTCGATAAAATCAGTCACC
AGTTGAGCGTGGCGGTGGACCAACCCTTCACACGGAGGGTCGAGGCTTGG
TTGCCTGAGTTGGAAACACGCCTTAAAGCAGCAGCCTTGAGAGACGTGGC
CCAGTGGCTGGTGGACATCAGAGGGAAAACCGTTTCTATTGGTAAAGGCG
CCCTGCGGAAATGCGTTGGTTACATGACCGGTCAAGGGGCGTCTGCGTTC
AGCAGCTGCTGACGCAGCAGGAGGGCACGACGTTGACGCCGGCCCAGTTG
TTGCTGCAACAGGTCCGTCACTTCGTGGATTTTTCTCCCTGGATGGCTGA
AGACGACCTCCTTGTGGCCCTTCCTCCCTTTCTCCGCTCCATCGACGGTG
AAGAACAACAAATTTTGAGCTTGCTGTCCGAGAAGCTAGACCCATTACAC
CGCGCGCTACACGTTCACGCCCACCTTGGCGCTTTAGACGAGCTTGCACT
GTTTTACGTCAACAACCGCTTTCCCCAGGCAACGCTACCCTCCGGTGGCT
CCTTCACCTCCTCGACATTGTCGATTCCAGCAGCAGTAACAGTGCCAGGA
GGAAGACCAGCAGCCAATAGCCCAAGGCCTAGCCCGATGGAAAGAGAAAA
GAGGGGAGAGAGTACGGAGGAATGGATAATGCAGATTCAGGAAGCTATGC
TTTATTTTGCCGGATTTTTCGTCACGGAACACCTTGCCCTACGTGCCACT
GATCATCCCGAAGGCCTCTTGCCTGTTGCCAAGCTGGAGGAATGCTGGTG
GGGGATTCAGAGGGATTTATGCACGCAAATGGAAACGAAAACAATGATTG
CAGTGTCGCCGGCGTTGCTTCTGCAGTTGAAGCAGACGGCGTTGTTGCTG
GCGTTTACCTTAGGGGAGGATTGTTTTCGGTTTAACACGCAGCCGTTACT
CGAGTCGGTGAGGGGCCTACTGAGAGAAAGGTATATTGACGCACAGCTAG
GGAGCTTGGAGAGGGTGTGTAGGGAGATCGTGGAGAAGGACGAATTTCAA
CCGATGAATGTTGCGTCGGAGAGGGAATGCAGGGCTCTCGTCTATCCTTT
TGGCTTGGAGAAGCGGGTGGACCTGGTGGTGCTGTCAA back to topprotein sequence of jgi.p|Nanoce1779_2|603583 >mRNA_8681-protein ID=mRNA_8681-protein|Name=jgi.p|Nanoce1779_2|603583|organism=Nannochloropsis oceanica|type=polypeptide|length=232bp
MVLEEERQQEGIDSMILEMVTGPPEQVAPCIRNALERGWEKALPGTLIEF
QRRRKEEIERICSRYYSEFLGSVQELLTAKSRLAALKHQIVRFNEDIKLT
GQGTLRTGHELQRQKFAHRNVQAAIIVLAQCRELTSLLALAKQQIEEGRH
CPALRTLDKISHQLSVAVDQPFTRRVEAWLPELETRLKAAALRDVAQWLV
DIRGKTVSIGKGALRKCVGYMTGQGASAFSSC back to topmRNA from alignment at scaffold_27:157024..159698- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8681 ID=mRNA_8681|Name=jgi.p|Nanoce1779_2|603583|organism=Nannochloropsis oceanica|type=mRNA|length=2675bp|location=Sequence derived from alignment at scaffold_27:157024..159698- (Nannochloropsis oceanica)
GCTGCGGCTGCTGCTGCTGCTGCTTGGTCATCCAGCTCGACGCCTTAGGG
CGCGGTGCCGCAGGTTCTTCCGAAAAAAAATTCTTGACAGAGCCCCACCA
AGACATACCTCGCAATGATCTGGCACTTTTATCGATCAAGTACCGATTGG
AATCCACAACGGCTTCGGCCCGGTCTAAGGACTCTTGCTGCCCCGCTACT
GCCGTCAGGGTTTCCCGCCCCATCGCTATGGACTCTTGCGCAACTCGTAG
GAAGCCGTTATATTCCTCCTCAGTCTTAAAATGGTGGGGTCTCTGCTTTG
TGCGGTCGTGTGATGTTGTATGAGATTTGGGTTGGGTGAGATGAAGGAGG
GAGGTGGGGTACGAGGGAGGGGATGGAGTGCTTACCTGTTGCTGCTGCTG
GTTGGTTTCCACGCTCCCATTGCCGCCGCCGCCGCCGCCTCCCCACTCCA
TGCTTTGGAATCTGTGTGTTTCTGGTCGGGGTGATAGATGCGCCGGGTTT
GAATTAGGCCAAGGAAGGCAACACTTGCGACTCAAAATGAAGACCTATGG
AAGACGCCGATGATGATGATGCGTTTGAGCCTCAACTTTGTTTGTAATGC
ATTTTTTCTAGCAAAATACAGCATGACGAGCTCCTTATCGAGGCCCAAGA
CTCCCACACCGGCCCGTAGCGGGGGGTGTAAAGGTCTGCAAACGTGCCGT
CATTCAAGGACCGGCCGCCTTGACCCTCGCCAAAATCGTGCATTCTGCGC
GCTTACCTATCTCGTCGTCTACTCCCATAACACAAAACACATACACACAG
CCAGCCATGGTGCTGGAGGAGGAGCGACAACAAGAAGGGATCGACTCCAT
GATCCTGGAAATGGTAACGGGCCCACCAGAGCAAGTGGCACCCTGCATTC
GCAACGCCCTCGAGGTACGTCTTCGGATTGGCCGCCGTCTTCCACACCTG
TTCCCTTCCCCAATCGGCCTTATCACGCATCCCATTCACTTGCCTCGATA
TCCTCTCCCTTTGAGCTCTGATTGTGCGTTATTTAGTTCTCCCCTCCATC
ACCTCTAACTCGGCACTCCCCAAAACATATCTATCTTCTCACCGGCTTGC
TCGTCTAATCTTCAAAAACATAGCGTGGCTGGGAAAAAGCGCTTCCAGGG
ACCCTGATCGAGTTCCAACGACGGCGCAAGGAGGAAATTGAGCGGATCTG
TAGTCGGTACTACTCCGAATTTCTAGGTTCGGTCCAAGAGCTCCTGACAG
CTAAAAGCCGACTTGCCGCCTTGAAGCACCAAATTGTCCGATTCAACGAA
GACATCAAGCTCACAGGACAGGGCACCCTCAGGACAGGCCACGAGCTCCA
ACGTCAAAAATTCGCCCACCGGAATGTGCAGGCTGCTATTATTGTGCTCG
CGCAATGCCGAGAGTTGACCTCGCTCCTGGCCTTGGCCAAGCAGCAGATC
GAGGAAGGGCGGCATTGCCCTGCCTTGAGGACGCTCGATAAAATCAGTCA
CCAGTTGAGCGTGGCGGTGGACCAACCCTTCACACGGAGGGTCGAGGCTT
GGTTGCCTGAGTTGGAAACACGCCTTAAAGCAGCAGCCTTGAGAGACGTG
GCCCAGTGGCTGGTGGACATCAGAGGGAAAACCGTTTCTATTGGTAAAGG
CGCCCTGCGGAAATGCGTTGGTTACATGACCGGTCAAGGGGCGTCTGCGT
TCAGCAGCTGCTGCTGCTGCAGCAGCAGCGGTCCGGACCACCATTGGCGG
CGGCGCCAGCAGCAGCAGGAGCAGCAGCAGCAGCCGACGCAGCAGCCGAC
GCAGCAGGAGGGCACGACGTTGACGCCGGCCCAGTTGTTGCTGCAACAGG
TCCGTCACTTCGTGGATTTTTCTCCCTGGATGGCTGAAGACGACCTCCTT
GTGGCCCTTCCTCCCTTTCTCCGCTCCATCGACGGTGAAGAACAACAAAT
TTTGAGCTTGCTGTCCGAGAAGCTAGACCCATTACACCGCGCGCTACACG
TTCACGCCCACCTTGGCGCTTTAGACGAGCTTGCACTGTTTTACGTCAAC
AACCGCTTTCCCCAGGCAACGCTACCCTCCGGTGGCTCCTTCACCTCCTC
GACATTGTCGATTCCAGCAGCAGTAACAGTGCCAGGAGGAAGACCAGCAG
CCAATAGCCCAAGGCCTAGCCCGATGGAAAGAGAAAAGAGGGGAGAGAGT
ACGGAGGAATGGATAATGCAGATTCAGGAAGCTATGCTTTATTTTGCCGG
ATTTTTCGTCACGGAACACCTTGCCCTACGTGCCACTGATCATCCCGAAG
GCCTCTTGCCTGTTGCCAAGCTGGAGGAATGCTGGTGGGGGATTCAGAGG
GATTTATGCACGCAAATGGAAACGAAAACAATGATTGCAGTGTCGCCGGC
GTTGCTTCTGCAGTTGAAGCAGACGGCGTTGTTGCTGGCGTTTACCTTAG
GGGAGGATTGTTTTCGGTTTAACACGCAGCCGTTACTCGAGTCGGTGAGG
GGCCTACTGAGAGAAAGGTATATTGACGCACAGCTAGGGAGCTTGGAGAG
GGTGTGTAGGGAGATCGTGGAGAAGGACGAATTTCAACCGATGAATGTTG
CGTCGGAGAGGGAATGCAGGGCTCTCGTCTATCCTTTTGGCTTGGAGAAG
CGGGTGGACCTGGTGGTGCTGTCAA back to topCoding sequence (CDS) from alignment at scaffold_27:157024..159698- >mRNA_8681 ID=mRNA_8681|Name=jgi.p|Nanoce1779_2|603583|organism=Nannochloropsis oceanica|type=CDS|length=1392bp|location=Sequence derived from alignment at scaffold_27:157024..159698- (Nannochloropsis oceanica)
AGCGTGGCTGGGAAAAAGCGCTTCCAGGGACCCTGATCGAGTTCCAACGA
CGGCGCAAGGAGGAAATTGAGCGGATCTGTAGTCGGTACTACTCCGAATT
TCTAGGTTCGGTCCAAGAGCTCCTGACAGCTAAAAGCCGACTTGCCGCCT
TGAAGCACCAAATTGTCCGATTCAACGAAGACATCAAGCTCACAGGACAG
GGCACCCTCAGGACAGGCCACGAGCTCCAACGTCAAAAATTCGCCCACCG
GAATGTGCAGGCTGCTATTATTGTGCTCGCGCAATGCCGAGAGTTGACCT
CGCTCCTGGCCTTGGCCAAGCAGCAGATCGAGGAAGGGCGGCATTGCCCT
GCCTTGAGGACGCTCGATAAAATCAGTCACCAGTTGAGCGTGGCGGTGGA
CCAACCCTTCACACGGAGGGTCGAGGCTTGGTTGCCTGAGTTGGAAACAC
GCCTTAAAGCAGCAGCCTTGAGAGACGTGGCCCAGTGGCTGGTGGACATC
AGAGGGAAAACCGTTTCTATTGGTAAAGGCGCCCTGCGGAAATGCGTTGG
TTACATGACCGGTCAAGGGGCGTCTGCGTTCAGCAGCTGCATGGTGCTGG
AGGAGGAGCGACAACAAGAAGGGATCGACTCCATGATCCTGGAAATGGTA
ACGGGCCCACCAGAGCAAGTGGCACCCTGCATTCGCAACGCCCTCGAGCG
TGGCTGGGAAAAAGCGCTTCCAGGGACCCTGATCGAGTTCCAACGACGGC
GCAAGGAGGAAATTGAGCGGATCTGTAGTCGGTACTACTCCGAATTTCTA
GGTTCGGTCCAAGAGCTCCTGACAGCTAAAAGCCGACTTGCCGCCTTGAA
GCACCAAATTGTCCGATTCAACGAAGACATCAAGCTCACAGGACAGGGCA
CCCTCAGGACAGGCCACGAGCTCCAACGTCAAAAATTCGCCCACCGGAAT
GTGCAGGCTGCTATTATTGTGCTCGCGCAATGCCGAGAGTTGACCTCGCT
CCTGGCCTTGGCCAAGCAGCAGATCGAGGAAGGGCGGCATTGCCCTGCCT
TGAGGACGCTCGATAAAATCAGTCACCAGTTGAGCGTGGCGGTGGACCAA
CCCTTCACACGGAGGGTCGAGGCTTGGTTGCCTGAGTTGGAAACACGCCT
TAAAGCAGCAGCCTTGAGAGACGTGGCCCAGTGGCTGGTGGACATCAGAG
GGAAAACCGTTTCTATTGGTAAAGGCGCCCTGCGGAAATGCGTTGGTTAC
ATGACCGGTCAAGGGGCGTCTGCGTTCAGCAGCTGCATGGTGCTGGAGGA
GGAGCGACAACAAGAAGGGATCGACTCCATGATCCTGGAAATGGTAACGG
GCCCACCAGAGCAAGTGGCACCCTGCATTCGCAACGCCCTCG back to top
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