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Properties
| Property Name | Value |
|---|
| TranscriptId | 603478 |
| Track | FilteredModels2 |
| ProteinId | 603392 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_27 | supercontig | scaffold_27:7245..8953 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8626 ID=mRNA_8626|Name=jgi.p|Nanoce1779_2|603392|organism=Nannochloropsis oceanica|type=mRNA|length=1682bp
TCACCCCCATCCGCACCCATGACCTCGCCCTCCCCCCCTTCTTCCCTCTT
GCCGACCATCCTCCCTCCCTCCCTCCTTCTCTCCCTTCCCACGACACCCT
CTCATCCCCTCGCTCTCTCTATCCTATAACCTTTCTGGCGGGTCAGTGAG
GATGAAGGTGCAGGAGGGAGGAAAAGAGAGAGGGGCAACCAGCCCACCAG
CCCATTGGAAGCACAATGTATCTGTGTGTATTTATTTCTGATATCGTTTA
CCCAGCAACGCAGCTACACCAGCATCAACCCAGCATCAGCACCAGCCGTA
GCAATTACAGCAGCCCCCCCAATATGTGCACCCTTTTCGAGCGTGTGATG
TTTACACACTTTTCTATTAATTTGATTTATCAATCTTTCATCTAATGCCA
CCTATCCCTGCAGCAGAGAGAAGATCTAGTGGGGAGAAAGGGCAGGATGA
AGGGAATATAAGAAGAAAATCAAGTGTAAAAAGAAGTGTGAGAAACAGCG
AGAGAGATTGAATGAGAGAGAGCGGACAAGGAAGAAGGGGAAGAGGGATG
AAGGCTCCTCTTTGCCAACCATTTTCTGCTATCAGAGAAAAATCAGAGAT
GAGGAACTTTCCCGTAGGCTTTGGAAAGGATGAGAGGCGCTCTTAATAAT
TTAAATGTGTGATTGTATACCCAGCCACCTTTATCACCATCGTAAAAATC
AGTACCCGTAGTACATTATATATACCATATTTCGTACTACTGTTATTACT
ACTATTACTAATTATTATTACAAGCTAATAATTAATTTGTTGGTATATCT
TATATTTATAAAAACTAAAACAAATATTATGTTCCGAACGACGAGCGACG
GTATTCAAATAGAAAGAGAGATAGAGGAGAAAAGGATATAGAGAGAAGGA
GAAAATAGACAAACAATTTCGTGCTGGGAAAGAGAAAACAAACGTGTGAG
GGATAAAAAAGAAGGAGCAGCTACATCAGCGGCCCTATGTCAAGCCACAT
ATTTTTAGTATCTTTCAATCAGCAGCAGCAGCAGCAGCAGCAGCTTACTT
AAAAGAGAAAAGGCCAACATCAGCAGCCAGCTCCTGGGAGCATAAAGAGT
TGTAAGAAGGATCGAAAATGAGGGGGTGTACGGCCTACAGCCACCACCGT
ACGAAAACGAGCTGGGAGGGGGAAACAGCGCTCACCACTTCAATACCCTA
CGGGATGAGTACTCGCGACGAGGGTACAGTAAAAGAGACAAGAGAGAAAC
ATGGAGTGATAATTAAGAGCAGCAGTAGCAGCAGTGTCAAAAGGGAAAGC
AAGCGTAAGAGCAAAGCGAGTAGACGAGAAGACGTCATGAAAAAAATCCA
AACGAAGCCCGCAGCAAGAAAAATGGTGAAAAGAGACTACCAAAAAGAAG
GGGATCAAAACCCGACCCCTCTCGGACAGACAAACCAAGCAGCCAGCAGC
CAGTCCGATAGATATTATTATATATTACAACGTGATCCATTCGCAGAGAA
AACAGAGAGTCATTACAAGATAGAGAAGAGCACTATCAGTGATAGTGGGG
AAAATCAAAATATAGGGGAAAATAAAAACCCCTCCCAAAAAAAATATAGA
ATAACTCTTTGGTAATCATCACTTTATCTCTTTTTTCTAATTCTCTCCTT
TCCTCTTCTTCCTTGCTCCGTTCATCCCTCGC back to topprotein sequence of jgi.p|Nanoce1779_2|603392 >mRNA_8626-protein ID=mRNA_8626-protein|Name=jgi.p|Nanoce1779_2|603392|organism=Nannochloropsis oceanica|type=polypeptide|length=166bp
MRGCTAYSHHRTKTSWEGETALTTSIPYGMSTRDEGTVKETREKHGVIIK
SSSSSSVKRESKRKSKASRREDVMKKIQTKPAARKMVKRDYQKEGDQNPT
PLGQTNQAASSQSDRYYYILQRDPFAEKTESHYKIEKSTISDSGENQNIG
ENKNPSQKKYRITLW* back to topmRNA from alignment at scaffold_27:7245..8953- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8626 ID=mRNA_8626|Name=jgi.p|Nanoce1779_2|603392|organism=Nannochloropsis oceanica|type=mRNA|length=1709bp|location=Sequence derived from alignment at scaffold_27:7245..8953- (Nannochloropsis oceanica)
TCACCCCCATCCGCACCCATGACCTCGCCCTCCCCCCCTTCTTCCCTCTT
GCCGACCATCCTCCCTCCCTCCCTCCTTCTCTCCCTTCCCACGACACCCT
CTCATCCCCTCGCTCTCTCTATCCTATAACCTTTCTGGCGGGTCAGTGAG
GATGAAGGTGCAGGAGGGAGGAAAAGAGAGAGGGGCAACCAGCCCACCAG
CCCATTGGAAGCACAATGTATCTGTGTGTATTTATTTCTGATATCGTTTA
CCCAGCAACGCAGCTACACCAGCATCAACCCAGCATCAGCACCAGCCGTA
GCAATTACAGCAGCCCCCCCAATATGTGCACCCTTTTCGAGCGTGTGATG
TTTACACACTTTTCTATTAATTTGATTTATCAATCTTTCATCTAATGCCA
CCTATCCCTGCAGCAGAGAGAAGATCTAGTGGGGAGAAAGGGCAGGATGA
AGGGAATATAAGAAGAAAATCAAGTGTAAAAAGAAGTGTGAGAAACAGCG
AGAGAGATTGAATGAGAGAGAGCGGACAAGGAAGAAGGGGAAGAGGGATG
AAGGCTCCTCTTTGCCAACCATTTTCTGCTATCAGAGAAAAATCAGAGAT
GAGGAACTTTCCCGTAGGCTTTGGAAAGGATGAGAGGCGCTCTTAATAAT
TTAAATGTGTGATTGTATACCCAGCCACCTTTATCACCATCGTAAAAATC
AGTACCCGTAGTACATTATATATACCATATTTCGTACTACTGTTATTACT
ACTATTACTAATTATTATTACAAGCTAATAATTAATTTGTTGGTATATCT
TATATTTATAAAAACTAAAACAAATATTATGTTCCGAACGACGAGCGACG
GTATTCAAATAGAAAGAGAGATAGAGGAGAAAAGGATATAGAGAGAAGGA
GAAAATAGACAAACAATTTCGTGCTGGGAAAGAGAAAACAAACGTGTGAG
GGATAAAAAAGAAGGAGCAGCTACATCAGCGGCCCTATGTCAAGCCACAT
ATTTTTAGTATCTTTCAATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCTTACTTAAAAGAGAAAAGGCCAACATCAG
CAGCCAGCTCCTGGGAGCATAAAGAGTTGTAAGAAGGATCGAAAATGAGG
GGGTGTACGGCCTACAGCCACCACCGTACGAAAACGAGCTGGGAGGGGGA
AACAGCGCTCACCACTTCAATACCCTACGGGATGAGTACTCGCGACGAGG
GTACAGTAAAAGAGACAAGAGAGAAACATGGAGTGATAATTAAGAGCAGC
AGTAGCAGCAGTGTCAAAAGGGAAAGCAAGCGTAAGAGCAAAGCGAGTAG
ACGAGAAGACGTCATGAAAAAAATCCAAACGAAGCCCGCAGCAAGAAAAA
TGGTGAAAAGAGACTACCAAAAAGAAGGGGATCAAAACCCGACCCCTCTC
GGACAGACAAACCAAGCAGCCAGCAGCCAGTCCGATAGATATTATTATAT
ATTACAACGTGATCCATTCGCAGAGAAAACAGAGAGTCATTACAAGATAG
AGAAGAGCACTATCAGTGATAGTGGGGAAAATCAAAATATAGGGGAAAAT
AAAAACCCCTCCCAAAAAAAATATAGAATAACTCTTTGGTAATCATCACT
TTATCTCTTTTTTCTAATTCTCTCCTTTCCTCTTCTTCCTTGCTCCGTTC
ATCCCTCGC back to topCoding sequence (CDS) from alignment at scaffold_27:7245..8953- >mRNA_8626 ID=mRNA_8626|Name=jgi.p|Nanoce1779_2|603392|organism=Nannochloropsis oceanica|type=CDS|length=498bp|location=Sequence derived from alignment at scaffold_27:7245..8953- (Nannochloropsis oceanica)
ATGAGGGGGTGTACGGCCTACAGCCACCACCGTACGAAAACGAGCTGGGA
GGGGGAAACAGCGCTCACCACTTCAATACCCTACGGGATGAGTACTCGCG
ACGAGGGTACAGTAAAAGAGACAAGAGAGAAACATGGAGTGATAATTAAG
AGCAGCAGTAGCAGCAGTGTCAAAAGGGAAAGCAAGCGTAAGAGCAAAGC
GAGTAGACGAGAAGACGTCATGAAAAAAATCCAAACGAAGCCCGCAGCAA
GAAAAATGGTGAAAAGAGACTACCAAAAAGAAGGGGATCAAAACCCGACC
CCTCTCGGACAGACAAACCAAGCAGCCAGCAGCCAGTCCGATAGATATTA
TTATATATTACAACGTGATCCATTCGCAGAGAAAACAGAGAGTCATTACA
AGATAGAGAAGAGCACTATCAGTGATAGTGGGGAAAATCAAAATATAGGG
GAAAATAAAAACCCCTCCCAAAAAAAATATAGAATAACTCTTTGGTAA back to top
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