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Properties
| Property Name | Value |
|---|
| TranscriptId | 210776 |
| Track | FilteredModels2 |
| ProteinId | 210690 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_26 | supercontig | scaffold_26:359968..361307 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8617 ID=mRNA_8617|Name=jgi.p|Nanoce1779_2|210690|organism=Nannochloropsis oceanica|type=mRNA|length=1099bp
GTCAGAAAAGGCATCACCAATCTCTTCCCCCTCTTATCTCCCCACCCCCC
CTTTTCCACCAACAGCATACAAAAAGTTTTGCCAGCCATCCCCATCCAAC
TCTCTCTGTTACGAAGTCTTACAGATGAACCCACAATTCGAAGACCACGG
TGCCAACGGCCTTGCTAGAAGCAGCAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAACAACAACAACAACAACAACCACAAGGACAAC
GACGACCGCATCTATTCCACCGAGACGAAGGAAGAGCACGTGGATATCAT
CCCCCTTGAGATCGAAGATGGAAGAGGGGCCCCAACGACTAGTGCCACTG
ATGCTACTATCGTCGGCACTGTCTCCCACAAAGCCTCTCAGGGAGGATTC
TGCGCTCGCCACAAGGGCAAGCTTATCTGCCTAGGTATTACCTTTGCCTT
GCTGCTGGCCGTGGCGATCGCTGTCCCGTTGCTTATTCCCAAGGATCCCA
CAGCTACTTTGTTGGAGCAGAGTAATCTGAGGTTAGACGGGCTGGGAACA
GGCAGTGTGGCGGTTGACCTGCGGTTCAAAGTGGATAACCCGAACCGTTA
TGCCATTTCGTTCCAGAACTTGAAACTAGACGTATACAATTTTAACGGCG
CCCATATCGGAGAGGTCACCCGTCAGGAACGTTTTTTTGTGCCTGGCCGT
TCGTCCGAGTTGATGACAGCTACTGCTTTCATGCAGCCATCTTTTTTCGA
GATCCTTGCCATGGGGATTAATTGCTTACAGAATGATAACCTAACCAAGC
TCAAAGTGAGGGGGACAGCGGAGGCACGCTTTGCGGGGAGGACGATTCAG
CAGGAGGTAAGCTCATCTGGGTGGGGATGTTGGTGTGATTGTGCGTTGGT
GTGGATACGGGATGGTTTGAACTTGCACTTGCATGTTTGAGGGTGGGTAG
GTGGATGGGTGGGCGGGTATAATCGAATCAAGCTCAGGGTTAGGCGGACG
GTGGAGACCCTTTTTCCAGAGAGGGAGTCAATGGTTTTGCTTTCTCTGCC
TTCTCCTCCTCTTTCTCCTCCTCTTCCTCCTCCCCTTTCTGCTACTTAT back to topprotein sequence of jgi.p|Nanoce1779_2|210690 >mRNA_8617-protein ID=mRNA_8617-protein|Name=jgi.p|Nanoce1779_2|210690|organism=Nannochloropsis oceanica|type=polypeptide|length=272bp
MNPQFEDHGANGLARSSNNNNNNNNNNNNNNNNNNNNNHKDNDDRIYSTE
TKEEHVDIIPLEIEDGRGAPTTSATDATIVGTVSHKASQGGFCARHKGKL
ICLGITFALLLAVAIAVPLLIPKDPTATLLEQSNLRLDGLGTGSVAVDLR
FKVDNPNRYAISFQNLKLDVYNFNGAHIGEVTRQERFFVPGRSSELMTAT
AFMQPSFFEILAMGINCLQNDNLTKLKVRGTAEARFAGRTIQQEVSSSGW
GCWCDCALVWIRDGLNLHLHV* back to topmRNA from alignment at scaffold_26:359968..361307+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8617 ID=mRNA_8617|Name=jgi.p|Nanoce1779_2|210690|organism=Nannochloropsis oceanica|type=mRNA|length=1340bp|location=Sequence derived from alignment at scaffold_26:359968..361307+ (Nannochloropsis oceanica)
GTCAGAAAAGGCATCACCAATCTCTTCCCCCTCTTATCTCCCCACCCCCC
CTTTTCCACCAACAGCATACAAAAAGTTTTGCCAGCCATCCCCATCCAAC
TCTCTCTGTTACGAAGTCTTACAGATGAACCCACAATTCGAAGACCACGG
TGCCAACGGCCTTGCTAGAAGCAGCAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAACAACAACAACAACAACAACCACAAGGACAAC
GACGACCGCATCTATTCCACCGAGACGAAGGAAGAGCACGTGGATATCAT
CCCCCTTGAGATCGAAGATGGAAGAGGGGCCCCAACGACTAGTGCCACTG
ATGCTACTATCGTCGGCACTGTCTCCCACAAAGCCTCTCAGGGAGGATTC
TGCGCTCGCCACAAGGGCAAGCTTATCTGCCTAGGTATTACCTTTGCCTT
GCTGCTGGCCGTGGCGATCGCTGTCCCGTTGCTTATTCCCAAGGATCCCA
CAGCTACTTTGTTGGAGCAGAGTAATCTGAGGTTAGACGGGCTGGGAACA
GGCAGTGTGGCGGTTGACCTGCGGTTCAAAGTGGATAACCCGAACCGTTA
TGCCATTTCGTTCCAGAACTTGAAACTAGGTAGGGTTGGATGGGGCAAAG
GGAAAAGAGGGAGTGAGAGGAGAAGGAATTGAAGGAGGATGGGAGGGAGG
GATGGAATAGGCCTAGATTGGGGTCGAAAAGAAAGAGGGAGAGGGGGAGG
GGAGGGGAGGGCAGGAGGAAGGGAGGGAAGCAAGGAGGGAGGTAGGGAGG
GATAGCAGGATCATGTATTCCAGGTCGTAGCTCTCAATACGTTTCTCCTC
CCTCCCACCCTCCGCCCTAGACGTATACAATTTTAACGGCGCCCATATCG
GAGAGGTCACCCGTCAGGAACGTTTTTTTGTGCCTGGCCGTTCGTCCGAG
TTGATGACAGCTACTGCTTTCATGCAGCCATCTTTTTTCGAGATCCTTGC
CATGGGGATTAATTGCTTACAGAATGATAACCTAACCAAGCTCAAAGTGA
GGGGGACAGCGGAGGCACGCTTTGCGGGGAGGACGATTCAGCAGGAGGTA
AGCTCATCTGGGTGGGGATGTTGGTGTGATTGTGCGTTGGTGTGGATACG
GGATGGTTTGAACTTGCACTTGCATGTTTGAGGGTGGGTAGGTGGATGGG
TGGGCGGGTATAATCGAATCAAGCTCAGGGTTAGGCGGACGGTGGAGACC
CTTTTTCCAGAGAGGGAGTCAATGGTTTTGCTTTCTCTGCCTTCTCCTCC
TCTTTCTCCTCCTCTTCCTCCTCCCCTTTCTGCTACTTAT back to topCoding sequence (CDS) from alignment at scaffold_26:359968..361307+ >mRNA_8617 ID=mRNA_8617|Name=jgi.p|Nanoce1779_2|210690|organism=Nannochloropsis oceanica|type=CDS|length=1632bp|location=Sequence derived from alignment at scaffold_26:359968..361307+ (Nannochloropsis oceanica)
ATGAACCCACAATTCGAAGACCACGGTGCCAACGGCCTTGCTAGAAGCAG
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACAACAACAACCACAAGGACAACGACGACCGCATCTATTCCACCGAG
ACGAAGGAAGAGCACGTGGATATCATCCCCCTTGAGATCGAAGATGGAAG
AGGGGCCCCAACGACTAGTGCCACTGATGCTACTATCGTCGGCACTGTCT
CCCACAAAGCCTCTCAGGGAGGATTCTGCGCTCGCCACAAGGGCAAGCTT
ATCTGCCTAGGTATTACCTTTGCCTTGCTGCTGGCCGTGGCGATCGCTGT
CCCGTTGCTTATTCCCAAGGATCCCACAGCTACTTTGTTGGAGCAGAGTA
ATCTGAGGTTAGACGGGCTGGGAACAGGCAGTGTGGCGGTTGACCTGCGG
TTCAAAGTGGATAACCCGAACCGTTATGCCATTTCGTTCCAGAACTTGAA
ACTAGACGTATACAATTTTAACGGCGCCCATATCGGAGAGGTCACCCGTC
AGGAACGTTTTTTTGTGCCTGGCCGTTCGTCCGAGTTGATGACAGCTACT
GCTTTCATGCAGCCATCTTTTTTCGAGATCCTTGCCATGGGGATTAATTG
CTTACAGAATGATAACCTAACCAAGCTCAAAGTGAGGGGGACAGCGGAGG
CACGCTTTGCGGGGAGGACGATTCAGCAGGAGGTAAGCTCATCTGGGTGG
GGATGTTGGTGTGATTGTGCGTTGGTGTGGATACGGGATGGTTTGAACTT
GCACTTGCATGTTTGAATGAACCCACAATTCGAAGACCACGGTGCCAACG
GCCTTGCTAGAAGCAGCAACAACAACAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACAACCACAAGGACAACGACGACCG
CATCTATTCCACCGAGACGAAGGAAGAGCACGTGGATATCATCCCCCTTG
AGATCGAAGATGGAAGAGGGGCCCCAACGACTAGTGCCACTGATGCTACT
ATCGTCGGCACTGTCTCCCACAAAGCCTCTCAGGGAGGATTCTGCGCTCG
CCACAAGGGCAAGCTTATCTGCCTAGGTATTACCTTTGCCTTGCTGCTGG
CCGTGGCGATCGCTGTCCCGTTGCTTATTCCCAAGGATCCCACAGCTACT
TTGTTGGAGCAGAGTAATCTGAGGTTAGACGGGCTGGGAACAGGCAGTGT
GGCGGTTGACCTGCGGTTCAAAGTGGATAACCCGAACCGTTATGCCATTT
CGTTCCAGAACTTGAAACTAGACGTATACAATTTTAACGGCGCCCATATC
GGAGAGGTCACCCGTCAGGAACGTTTTTTTGTGCCTGGCCGTTCGTCCGA
GTTGATGACAGCTACTGCTTTCATGCAGCCATCTTTTTTCGAGATCCTTG
CCATGGGGATTAATTGCTTACAGAATGATAACCTAACCAAGCTCAAAGTG
AGGGGGACAGCGGAGGCACGCTTTGCGGGGAGGACGATTCAGCAGGAGGT
AAGCTCATCTGGGTGGGGATGTTGGTGTGATTGTGCGTTGGTGTGGATAC
GGGATGGTTTGAACTTGCACTTGCATGTTTGA back to top
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