|
|
Properties
| Property Name | Value |
| TranscriptId | 633119 |
| Track | FilteredModels2 |
| ProteinId | 633033 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_26 | supercontig | scaffold_26:322651..325491 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8605 ID=mRNA_8605|Name=jgi.p|Nanoce1779_2|633033|organism=Nannochloropsis oceanica|type=mRNA|length=2230bp GTTCTGCTGCCGACAAGGGTCCGCCTCTCCCCTTCCTCCCTCCATTCCTT CCCCCCCGACCCGGAAGACCTGAGCCGCATCCCCCTCTGCCTCGACCCCC ACCTCTCCCTCCTCCTCCTCCTCGCCCTACCCTTTTCCACCCTCATTGAT GGCTCGTTCCCCTCTTCCACACGACTGCCCACCATTAAGTCCCTGTTCCA CCTCATGACCATGTCTCCTCCCTCCCTCCTCTACTCCCCCGCCATCAAGC CCTCCGCCCAAGTGCTGTGTCTGGCCCTTTGGGGGCTTCTGGGAGACGGC GAAACCGAGGTACGAGAAACAGTCGCCGAGCGATCCATCGGCTTCCTGGT CCAGCGAGGAAAGTTGGCCAGACTCATGGTCCGCTCAACAGGAAGGGAAG AGGGGGGGGAAAGAGGGAGGGCCACGGCGGCAGGAAGGGCGCTCAGGGGT GGTAATGGAAATGAGGACGAGGGAGGGAAGGAGAAAAGTGAAGGGGATCC AGGGAGGATTCCGTGTGAGTGGGCGGTTAAAGACTTGATCAGTCGGTTGA AAGTTTCGTTGAGAGGGAGGCAGGCGGCGTTGGAGGGGGATGCGTGTGTC GCTCCTCTGTTGCTGGGCACGTTATTGCAGGCCATGGGGGCCATTGCCAC GAGGGCACCAGTGGAGAAAGGGTTTGAGAGTGTGTATTTGTGGGTGGTCT TGAGGTTGGTGGATGTATGGACAGAGGAAGGCATGATCTGCAGTAGCTTT GCGTACGAGCAATTGGTGCGTGTGGCCCGGAAGGGGAAATATAGGATGGA GGAGGCGATGGCGAGGGATGCGGATGAGGTATTGCCCTTGTTACTGAGGC GGTTGGTCAAGCGGGGGATGGTCGAGGCGTTCGTGAGGGAGGTTCTGACG GACGAGGAGAGTCCGAGGGTGTTTTTGGACCTTAGTTTGAAATATGCAGT GGCAGCGGTTGTCGAGGAGGAGGACGAGGACGACTTGGTCTTGCTGGCGC AGGCGTGGGGGAGGCATGTGGAGCCCACGTTGAGAGGAGTGTTGATGGAG CGAGAAAGGGAGAAAGAAGGAGGGACGATTGTAGAAAGGATGCTGGTGAA GCTCGCCCCGGTGGTGGTGCCACGGCTGTTGGTGGAGGACGTGACGAAGG TGTGTTTTTTTATGGACAGACTACCGCAGGGGCATGGGGGGCTGAATGAA CTCATGGCAATTCACGATCAGACGATGTTCTGCGAGTTGATCTGGGAGTG GGGAGAGGCCGAGGAGCGGGGGGAGGAGGAAAGAGCGGCACGCGCACACC GGGCTTTGGAGATTCTGACCTGTGCCAAGAGGAATAACATGGTCCCGTCG TTCTTGCCGAAGATATTGTCCATCATGAAGGTGATGCTTTGGGAGGGCGG GGGGGCTCGAGGGGGGGAGGGAGGGGAGGAGGACGAGGTAAAGGAGATGG CATGTCATGTCATGTCAACGTTTGTGAGGTCTTTGCCCGATGCGGAGTTA CGGGCAAACATGGCCGTGCTGGTGGTTACCCTCCTTCCTGCCATCCTCCC CTTGTCGCAATGGGCGGGTGACACAGCTTGGGGCGGACCGCCCTCCTTCA GCTCCTCAATTGGCTGATCGTCACGAAGCAGCCTTCCCTCCATCCTTCCT TCAAGGCCATCCCTTTCCTTCCGCACCAACTCCCCGAGCTGGCCGAAGCC AGAATCATCAGCAGGTGTATAACCTGATTTTGGGAGCGGACGACACAGCG GCGGAAGAAGTGATCTCGGAGCTTTTAACTGTACTCCTGCGTTTATCCGC CGAAGAAAAAAATGATGACGTTTCCCAAGCCATCTGCGCCTGTCTCGGAG AGCTGGGGGCCATCGACCCAGCGCGTGTCAACATCACCCTCTTCGAGAAC AGTGCCGCCAAAGCAGCAGCGTCTGCTATTTCCTCTACTTCCACTTCCTC TTCCTCCCTTGATACTCCGTCCTCCCTTCCTTCTTCCGCCCCCCTCCATG CCCCCTGGAAGACCAATGATTCGCATATGGCGCTGGTGCTCTTGCAGCAC ATGCTGGTGCCCAAGATGAGAGCAGCAACAGCCGACAAGGACAGGTATCC TCTCTTCCCTCCCTTCTTCCCTCCGGCCCTCCCAGGCTCCTTTCAGGCAT TCCGAAATTTTCTCTTTACTTTTATCGACGCCCCTCAGCCTCCTTCCTCC CTCCCTCCGTTATTTTCTCCCTTCTCCCCC back to topprotein sequence of jgi.p|Nanoce1779_2|633033 >mRNA_8605-protein ID=mRNA_8605-protein|Name=jgi.p|Nanoce1779_2|633033|organism=Nannochloropsis oceanica|type=polypeptide|length=471bp MTMSPPSLLYSPAIKPSAQVLCLALWGLLGDGETEVRETVAERSIGFLVQ RGKLARLMVRSTGREEGGERGRATAAGRALRGGNGNEDEGGKEKSEGDPG RIPCEWAVKDLISRLKVSLRGRQAALEGDACVAPLLLGTLLQAMGAIATR APVEKGFESVYLWVVLRLVDVWTEEGMICSSFAYEQLVRVARKGKYRMEE AMARDADEVLPLLLRRLVKRGMVEAFVREVLTDEESPRVFLDLSLKYAVA AVVEEEDEDDLVLLAQAWGRHVEPTLRGVLMEREREKEGGTIVERMLVKL APVVVPRLLVEDVTKVCFFMDRLPQGHGGLNELMAIHDQTMFCELIWEWG EAEERGEEERAARAHRALEILTCAKRNNMVPSFLPKILSIMKVMLWEGGG ARGGEGGEEDEVKEMACHVMSTFVRSLPDAELRANMAVLVVTLLPAILPL SQWAGDTAWGGPPSFSSSIG* back to topmRNA from alignment at scaffold_26:322651..325491+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8605 ID=mRNA_8605|Name=jgi.p|Nanoce1779_2|633033|organism=Nannochloropsis oceanica|type=mRNA|length=2841bp|location=Sequence derived from alignment at scaffold_26:322651..325491+ (Nannochloropsis oceanica) GTTCTGCTGCCGACAAGGGTCCGCCTCTCCCCTTCCTCCCTCCATTCCTT
CCCCCCCGACCCGGAAGACCTGAGCCGCATCCCCCTCTGCCTCGACCCCC
ACCTCTCCCTCCTCCTCCTCCTCGCCCTACCCTTTTCCACCCTCATTGAT
GGCTCGTTCCCCTCTTCCACACGACTGCCCACCATTAAGTCCCTGTTCCA
CCTCATGACCATGTCTCCTCCCTCCCTCCTCTACTCCCCCGCCATCAAGC
CCTCCGCCCAAGTGCTGTGTCTGGCCCTTTGGGGGCTTCTGGGAGACGGC
GAAACCGAGGTACGAGAAACAGTCGCCGAGCGATCCATCGGCTTCCTGGT
CCAGCGAGGAAAGTTGGCCAGACTCATGGTCCGCTCAACAGGAAGGGAAG
AGGGGGGGGAAAGAGGGAGGGCCACGGCGGCAGGAAGGGCGCTCAGGGGT
GGTAATGGAAATGAGGACGAGGGAGGGAAGGAGAAAAGTGAAGGGGATCC
AGGGAGGATTCCGTGTGAGTGGGCGGTTAAAGACTTGATCAGTCGGTTGA
AAGTTTCGTTGAGAGGGAGGCAGGCGGCGTTGGAGGGGGATGCGTGTGTC
GCTCCTCTGTTGCTGGGCACGTTATTGCAGGCCATGGGGGCCATTGCCAC
GAGGGCACCAGTGGAGAAAGGGTTTGAGAGTGTGTATTTGTGGGTGGTCT
TGAGGTTGGTGGATGTATGGACAGAGGAAGGCATGATCTGCAGTAGCTTT
GCGTACGAGCAATTGGTGCGTGTGGCCCGGAAGGGGAAATATAGGATGGA
GGAGGCGATGGCGAGGGATGCGGATGAGGTATTGCCCTTGTTACTGAGGC
GGTTGGTCAAGCGGGGGATGGTCGAGGCGTTCGTGAGGGAGGTTCTGACG
GACGAGGAGAGTCCGAGGGTGTTTTTGGACCTTAGTTTGAAATATGCAGT
GGCAGCGGTTGTCGAGGAGGAGGACGAGGACGACTTGGTCTTGCTGGCGC
AGGCGTGGGGGAGGCATGTGGAGCCCACGTTGAGAGGAGTGTTGATGGAG
CGAGAAAGGGAGAAAGAAGGAGGGACGATTGTAGAAAGGATGCTGGTGAA
GCTCGCCCCGGTGGTGGTGCCACGGCTGTTGGTGGAGGACGTGACGAAGG
TGTGTTTTTTTATGGACAGACTACCGCAGGGGCATGGGGGGCTGAATGAA
CTCATGGCAATTCACGATCAGACGATGTTCTGCGAGTTGATCTGGGAGTG
GGGAGAGGCCGAGGAGCGGGGGGAGGAGGAAAGAGCGGCACGCGCACACC
GGGCTTTGGAGATTCTGACCTGTGCCAAGAGGAATAACATGTTGGTGGTC
GAAGACCAGCAGCACCAGCACCAGCACCAGGGCTACCACCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGGGAGCACCGAAGGGGGCTTCTGTCG
GAGATATCCAAGACTTTGTGGGAGGGAATTTTCTGTTTGCCTTGAGCAAG
AGCGTGCTTCCCGTAGGATGGGAGCAGAGGACGGTGCGGAAAAATGCGAT
AGCGATGAGGTGTTTAAGATTGATGCTTGAGTTAATGGGTGTGGCTAGGG
TCCCGTCGTTCTTGCCGAAGATATTGTCCATCATGAAGGTGATGCTTTGG
GAGGGCGGGGGGGCTCGAGGGGGGGAGGGAGGGGAGGAGGACGAGGTAAA
GGAGATGGCATGTCATGTCATGTCAACGTTTGTGAGGTCTTTGCCCGATG
CGGAGTTACGGGCAAACATGGCCGTGCTGGTGGTTACCCTCCTTCCTGCC
ATCCTCCCCTTGTCGCAATGGGCGGGTGACACAGCTTGGTATGCAGAGAA
TGCCGGAGAGGGCCAAAAAGCGCTATTCCCCCTCCATCACCCTTTTCCTT
CCCGTCAAGCCCCCCTCCCCCTCCACTCCCAGGGGCGGACCGCCCTCCTT
CAGCTCCTCAATTGGCTGATCGTCACGAAGCAGCCTTCCCTCCATCCTTC
CTTCAAGGCCATCCCTTTCCTTCCGCACCAACTCCCCGAGCTGGCCGAAG
CCAGGCAAGTCTTTTCAGACTCCCTCCCTCCCACCTCTCAAACCACCCCT
CATCTCCGTCGGCTCCTTGTCCTCTTGGCCCACCACTCCCCCGAAGTCCG
CTATGCGACATTGAGGCAGTTACGTGCATTTCTGAAACAGAATCATCAGC
AGGTGTATAACCTGATTTTGGGAGCGGACGACACAGCGGCGGAAGAAGTG
ATCTCGGAGCTTTTAACTGTACGTCCCATCATCCCTCCCTCCTTCATTCC
TTGCCTTCCTCGTTTCTGGACATGCTAGGTTTCTGTACAGTAGACTCACC
ACCCTTTTCCTCATTCCATTCATCCCTCCCACCTAACCAAGGTACTCCTG
CGTTTATCCGCCGAAGAAAAAAATGATGACGTTTCCCAAGCCATCTGCGC
CTGTCTCGGAGAGCTGGGGGCCATCGACCCAGCGCGTGTCAACATCACCC
TCTTCGAGAACAGTGCCGCCAAAGCAGCAGCGTCTGCTATTTCCTCTACT
TCCACTTCCTCTTCCTCCCTTGATACTCCGTCCTCCCTTCCTTCTTCCGC
CCCCCTCCATGCCCCCTGGAAGACCAATGATTCGCATATGGCGCTGGTGC
TCTTGCAGCACATGCTGGTGCCCAAGATGAGAGCAGCAACAGCCGACAAG
GACAGGTATCCTCTCTTCCCTCCCTTCTTCCCTCCGGCCCTCCCAGGCTC
CTTTCAGGCATTCCGAAATTTTCTCTTTACTTTTATCGACGCCCCTCAGC
CTCCTTCCTCCCTCCCTCCGTTATTTTCTCCCTTCTCCCCC back to topCoding sequence (CDS) from alignment at scaffold_26:322651..325491+ >mRNA_8605 ID=mRNA_8605|Name=jgi.p|Nanoce1779_2|633033|organism=Nannochloropsis oceanica|type=CDS|length=4239bp|location=Sequence derived from alignment at scaffold_26:322651..325491+ (Nannochloropsis oceanica) ATGACCATGTCTCCTCCCTCCCTCCTCTACTCCCCCGCCATCAAGCCCTC CGCCCAAGTGCTGTGTCTGGCCCTTTGGGGGCTTCTGGGAGACGGCGAAA CCGAGGTACGAGAAACAGTCGCCGAGCGATCCATCGGCTTCCTGGTCCAG CGAGGAAAGTTGGCCAGACTCATGGTCCGCTCAACAGGAAGGGAAGAGGG GGGGGAAAGAGGGAGGGCCACGGCGGCAGGAAGGGCGCTCAGGGGTGGTA ATGGAAATGAGGACGAGGGAGGGAAGGAGAAAAGTGAAGGGGATCCAGGG AGGATTCCGTGTGAGTGGGCGGTTAAAGACTTGATCAGTCGGTTGAAAGT TTCGTTGAGAGGGAGGCAGGCGGCGTTGGAGGGGGATGCGTGTGTCGCTC CTCTGTTGCTGGGCACGTTATTGCAGGCCATGGGGGCCATTGCCACGAGG GCACCAGTGGAGAAAGGGTTTGAGAGTGTGTATTTGTGGGTGGTCTTGAG GTTGGTGGATGTATGGACAGAGGAAGGCATGATCTGCAGTAGCTTTGCGT ACGAGCAATTGGTGCGTGTGGCCCGGAAGGGGAAATATAGGATGGAGGAG GCGATGGCGAGGGATGCGGATGAGGTATTGCCCTTGTTACTGAGGCGGTT GGTCAAGCGGGGGATGGTCGAGGCGTTCGTGAGGGAGGTTCTGACGGACG AGGAGAGTCCGAGGGTGTTTTTGGACCTTAGTTTGAAATATGCAGTGGCA GCGGTTGTCGAGGAGGAGGACGAGGACGACTTGGTCTTGCTGGCGCAGGC GTGGGGGAGGCATGTGGAGCCCACGTTGAGAGGAGTGTTGATGGAGCGAG AAAGGGAGAAAGAAGGAGGGACGATTGTAGAAAGGATGCTGGTGAAGCTC GCCCCGGTGGTGGTGCCACGGCTGTTGGTGGAGGACGTGACGAAGGTGTG TTTTTTTATGGACAGACTACCGCAGGGGCATGGGGGGCTGAATGAACTCA TGGCAATTCACGATCAGACGATGTTCTGCGAGTTGATCTGGGAGTGGGGA GAGGCCGAGGAGCGGGGGGAGGAGGAAAGAGCGGCACGCGCACACCGGGC TTTGGAGATTCTGACCTGTGCCAAGAGGAATAACATGGTCCCGTCGTTCT TGCCGAAGATATTGTCCATCATGAAGGTGATGCTTTGGGAGGGCGGGGGG GCTCGAGGGGGGGAGGGAGGGGAGGAGGACGAGGTAAAGGAGATGGCATG TCATGTCATGTCAACGTTTGTGAGGTCTTTGCCCGATGCGGAGTTACGGG CAAACATGGCCGTGCTGGTGGTTACCCTCCTTCCTGCCATCCTCCCCTTG TCGCAATGGGCGGGTGACACAGCTTGGGGCGGACCGCCCTCCTTCAGCTC CTCAATTGGCTGAATGACCATGTCTCCTCCCTCCCTCCTCTACTCCCCCG CCATCAAGCCCTCCGCCCAAGTGCTGTGTCTGGCCCTTTGGGGGCTTCTG GGAGACGGCGAAACCGAGGTACGAGAAACAGTCGCCGAGCGATCCATCGG CTTCCTGGTCCAGCGAGGAAAGTTGGCCAGACTCATGGTCCGCTCAACAG GAAGGGAAGAGGGGGGGGAAAGAGGGAGGGCCACGGCGGCAGGAAGGGCG CTCAGGGGTGGTAATGGAAATGAGGACGAGGGAGGGAAGGAGAAAAGTGA AGGGGATCCAGGGAGGATTCCGTGTGAGTGGGCGGTTAAAGACTTGATCA GTCGGTTGAAAGTTTCGTTGAGAGGGAGGCAGGCGGCGTTGGAGGGGGAT GCGTGTGTCGCTCCTCTGTTGCTGGGCACGTTATTGCAGGCCATGGGGGC CATTGCCACGAGGGCACCAGTGGAGAAAGGGTTTGAGAGTGTGTATTTGT GGGTGGTCTTGAGGTTGGTGGATGTATGGACAGAGGAAGGCATGATCTGC AGTAGCTTTGCGTACGAGCAATTGGTGCGTGTGGCCCGGAAGGGGAAATA TAGGATGGAGGAGGCGATGGCGAGGGATGCGGATGAGGTATTGCCCTTGT TACTGAGGCGGTTGGTCAAGCGGGGGATGGTCGAGGCGTTCGTGAGGGAG GTTCTGACGGACGAGGAGAGTCCGAGGGTGTTTTTGGACCTTAGTTTGAA ATATGCAGTGGCAGCGGTTGTCGAGGAGGAGGACGAGGACGACTTGGTCT TGCTGGCGCAGGCGTGGGGGAGGCATGTGGAGCCCACGTTGAGAGGAGTG TTGATGGAGCGAGAAAGGGAGAAAGAAGGAGGGACGATTGTAGAAAGGAT GCTGGTGAAGCTCGCCCCGGTGGTGGTGCCACGGCTGTTGGTGGAGGACG TGACGAAGGTGTGTTTTTTTATGGACAGACTACCGCAGGGGCATGGGGGG CTGAATGAACTCATGGCAATTCACGATCAGACGATGTTCTGCGAGTTGAT CTGGGAGTGGGGAGAGGCCGAGGAGCGGGGGGAGGAGGAAAGAGCGGCAC GCGCACACCGGGCTTTGGAGATTCTGACCTGTGCCAAGAGGAATAACATG GTCCCGTCGTTCTTGCCGAAGATATTGTCCATCATGAAGGTGATGCTTTG GGAGGGCGGGGGGGCTCGAGGGGGGGAGGGAGGGGAGGAGGACGAGGTAA AGGAGATGGCATGTCATGTCATGTCAACGTTTGTGAGGTCTTTGCCCGAT GCGGAGTTACGGGCAAACATGGCCGTGCTGGTGGTTACCCTCCTTCCTGC CATCCTCCCCTTGTCGCAATGGGCGGGTGACACAGCTTGGGGCGGACCGC CCTCCTTCAGCTCCTCAATTGGCTGAATGACCATGTCTCCTCCCTCCCTC CTCTACTCCCCCGCCATCAAGCCCTCCGCCCAAGTGCTGTGTCTGGCCCT TTGGGGGCTTCTGGGAGACGGCGAAACCGAGGTACGAGAAACAGTCGCCG AGCGATCCATCGGCTTCCTGGTCCAGCGAGGAAAGTTGGCCAGACTCATG GTCCGCTCAACAGGAAGGGAAGAGGGGGGGGAAAGAGGGAGGGCCACGGC GGCAGGAAGGGCGCTCAGGGGTGGTAATGGAAATGAGGACGAGGGAGGGA AGGAGAAAAGTGAAGGGGATCCAGGGAGGATTCCGTGTGAGTGGGCGGTT AAAGACTTGATCAGTCGGTTGAAAGTTTCGTTGAGAGGGAGGCAGGCGGC GTTGGAGGGGGATGCGTGTGTCGCTCCTCTGTTGCTGGGCACGTTATTGC AGGCCATGGGGGCCATTGCCACGAGGGCACCAGTGGAGAAAGGGTTTGAG AGTGTGTATTTGTGGGTGGTCTTGAGGTTGGTGGATGTATGGACAGAGGA AGGCATGATCTGCAGTAGCTTTGCGTACGAGCAATTGGTGCGTGTGGCCC GGAAGGGGAAATATAGGATGGAGGAGGCGATGGCGAGGGATGCGGATGAG GTATTGCCCTTGTTACTGAGGCGGTTGGTCAAGCGGGGGATGGTCGAGGC GTTCGTGAGGGAGGTTCTGACGGACGAGGAGAGTCCGAGGGTGTTTTTGG ACCTTAGTTTGAAATATGCAGTGGCAGCGGTTGTCGAGGAGGAGGACGAG GACGACTTGGTCTTGCTGGCGCAGGCGTGGGGGAGGCATGTGGAGCCCAC GTTGAGAGGAGTGTTGATGGAGCGAGAAAGGGAGAAAGAAGGAGGGACGA TTGTAGAAAGGATGCTGGTGAAGCTCGCCCCGGTGGTGGTGCCACGGCTG TTGGTGGAGGACGTGACGAAGGTGTGTTTTTTTATGGACAGACTACCGCA GGGGCATGGGGGGCTGAATGAACTCATGGCAATTCACGATCAGACGATGT TCTGCGAGTTGATCTGGGAGTGGGGAGAGGCCGAGGAGCGGGGGGAGGAG GAAAGAGCGGCACGCGCACACCGGGCTTTGGAGATTCTGACCTGTGCCAA GAGGAATAACATGGTCCCGTCGTTCTTGCCGAAGATATTGTCCATCATGA AGGTGATGCTTTGGGAGGGCGGGGGGGCTCGAGGGGGGGAGGGAGGGGAG GAGGACGAGGTAAAGGAGATGGCATGTCATGTCATGTCAACGTTTGTGAG GTCTTTGCCCGATGCGGAGTTACGGGCAAACATGGCCGTGCTGGTGGTTA CCCTCCTTCCTGCCATCCTCCCCTTGTCGCAATGGGCGGGTGACACAGCT TGGGGCGGACCGCCCTCCTTCAGCTCCTCAATTGGCTGA back to top
|