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Properties
| Property Name | Value |
| TranscriptId | 624101 |
| Track | FilteredModels2 |
| ProteinId | 624015 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_26 | supercontig | scaffold_26:250206..252850 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8577 ID=mRNA_8577|Name=jgi.p|Nanoce1779_2|624015|organism=Nannochloropsis oceanica|type=mRNA|length=1449bp ATGAAGTGGTGGGGATTGTACGGCAGAAGTTATTATTCAAAGAACGGCCC AAGCCCATTGTGTCGCGGCACTTGCTGCAGCGAGATTTTTGCCTTGGAAC CCCCCGTCTTCCCATCTGATTTTGTCTGGGGCGTGGCGACAAGCGCGTAT CAAATCGAAGGTGCTGTCAAGGAAGACGGCCGGGGAGCGTCTATATGGGA TATCTTTGCGCATACACCTGGCAAGATCTCGGGCGATACAACAGGGGACG TGGCTTGTGATCATTACCATCGATATGAGGAAGACATTGCATTGATGCGA TCTCTCGGAGTGAGCCACTATCGTTTCTCTATCTCCTGGTCGCGCATCCT GCCCACGGGCACCGACGAGCAAATTAACGACCAGGGCATTGCGTTCTATA GCAACTTAATCAATGCCCTCCTCGAAGCAGGAATCCAGCCTGCCGTCACG TTATACCACTGGGATCTACCGCAAACACTACAAGAGCAGGGAGGATGGCA GAATTCTTCGCTCATCGTCCCCGCCTTTGCCAAGTACGCGGACCTCTGTT TTTACACCTTTGGCGACCGAGTCAAGATGTGGTTCACGATCAATGAGCCT TGGTCCACTGCGGTGTTAGGGCACGGGATAGGGGTAATGGCCCCAGGTAT AAAGGATCAAGAATGGGCTGTATACGTAGTCGGCCACACCCAATTGCTGG CGCATGCGGCAGCCGTGAAGTTTAAAGAGCCTCTCTGCGACACCTCCCCT TCGGACATCGAGGCGGCCGAACGCAACCTACAATTCTATCTCGGCTGGTT CGCTTCACCCATATTTAATGGTGATTACCCGGCAGTGATGCGTGAGAGGG TTGGGAAACGCCTGCCTTCGTTTTCGGGCGAGGAAATGAAGGAGGTGAAA GGCTCGGTGGACTTTCTGGGTATCAACACATATGGGTCCTCCATGATCAC GGATAGAGGAGGGAAAGGAGGTGGATATTTTGCTGATGTGTCTACGGCGA GCACGGGCGACCCGGCGTGGTCTCAGGGAGAGTCGAGCTGGTTGTGGATT GCACCTGCGGGGATGAGGAAGTTGTTGCGGTGGGTGAAAGTAGAGTATGA TTCGCCGGTTGTGTATGTGACTGAGAATGGATTGGACGTCGCGGGGGAGG AGCAGTGGGGGGAGGGCGGACAGGGAGGGGGGTTTCGAAAGGACGCAGCG AGGGTGGATTATATCAAGAATTATTTGGCAGAGGTGGGTAAGGCGAGAAA GTTCGATGGCGTGGACGTACGGGGTTATTTTGTGTGGTCTTTATTGGACA ATTTTGAGTGGGCAGAGGGGTTTTCGAGCAGGTTTGGTTTGGTGAGGGTG ATGTTTAAGGAGGGGCAGAAGAGGCTCCCGCAGGTGATCCAGGAGCGATG CTACCAGAAGCAGAGTTGCCATGAGCGGCAGGCTGGCCCACAGGAATAA back to topprotein sequence of jgi.p|Nanoce1779_2|624015 >mRNA_8577-protein ID=mRNA_8577-protein|Name=jgi.p|Nanoce1779_2|624015|organism=Nannochloropsis oceanica|type=polypeptide|length=483bp MKWWGLYGRSYYSKNGPSPLCRGTCCSEIFALEPPVFPSDFVWGVATSAY QIEGAVKEDGRGASIWDIFAHTPGKISGDTTGDVACDHYHRYEEDIALMR SLGVSHYRFSISWSRILPTGTDEQINDQGIAFYSNLINALLEAGIQPAVT LYHWDLPQTLQEQGGWQNSSLIVPAFAKYADLCFYTFGDRVKMWFTINEP WSTAVLGHGIGVMAPGIKDQEWAVYVVGHTQLLAHAAAVKFKEPLCDTSP SDIEAAERNLQFYLGWFASPIFNGDYPAVMRERVGKRLPSFSGEEMKEVK GSVDFLGINTYGSSMITDRGGKGGGYFADVSTASTGDPAWSQGESSWLWI APAGMRKLLRWVKVEYDSPVVYVTENGLDVAGEEQWGEGGQGGGFRKDAA RVDYIKNYLAEVGKARKFDGVDVRGYFVWSLLDNFEWAEGFSSRFGLVRV MFKEGQKRLPQVIQERCYQKQSCHERQAGPQE* back to topmRNA from alignment at scaffold_26:250206..252850- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8577 ID=mRNA_8577|Name=jgi.p|Nanoce1779_2|624015|organism=Nannochloropsis oceanica|type=mRNA|length=2645bp|location=Sequence derived from alignment at scaffold_26:250206..252850- (Nannochloropsis oceanica) ATGAAGTGGTGGGGATTGTACGGCAGAAGTTATTATTCAAAGAACGGCCC
AAGCCCATTGTGTCGCGGCACTTGCTGCAGCGGTAGGTGTAGCGCAGGGA
GGGGGGAGCGTGGGATAGTTGATAATCAAGAGTATTACGTTTTGAGGAAG
CGCTAGAAAAATAAAAAAGCTTGAAGACAGAAAAATATGAAGCGATGCGG
CGATTGAATGCCAATTGTTGTCTCTGTTTTCTTCATGTTTTGATTCTTCT
TTGGGGGGGCCATGCCTCACACCAAACCTCCCCGGAGGTGTTCGTCATCG
CTCAGCTGTCGATGTGGCACTTCAATTCAATGTGGAGACGCATGCATATA
ACGTCTACATGCATGTCACACACATTTCCTAAGCCATGCTGCCAGATAGC
ACAAGCACAATGTGGACTCTATATTGTCACCCTGTCCGCCTTTCTCACCG
GCACCGTCCAAATCTTTGCCTCAAACAGACGCTGCAAGCAGCAGCAGTCA
CACCCTCAACAGCCGGCTTCGTACATGTCTAATCCGCCACCGTCTCCGCC
ACCACGACGGCGCTTGCGGCAGCGCTCCTGGGAGCCTTTGAGAGCAGTAG
CAGCGGCAGCAGCAGCAACAGCAACGACAGCGATAACCATCGTGGCTCTG
ATATCCAGCCTCTCTGTTCTGCCAACCGTCAATTCTGCGCCAAATCTACG
CCAGGACATGAAGTCTGCTGCTACGGATTCTCCACCCAGCAACAACAGTA
CCATCATCACCACCGCTCGCCCCACTTGCCGTGCCCGGGCGTTTAATGAT
CTAGGCGATTCCGCGTCTAACTTGACCCCAGCAGAGATTTTTGCCTTGGA
ACCCCCCGTCTTCCCATCTGATTTTGTCTGGGGCGTGGCGACAAGCGCGT
ATCAAATCGAAGGTGCTGTCAAGGAAGACGGCCGGGGAGCGTCTATATGG
GATATCTTTGCGCATACACCTGGCAAGATCTCGGGCGATACAACAGGGGA
CGTGGCTTGTGATCATTACCATCGATATGAGGAAGACATTGCATTGATGC
GATCTCTCGGAGTGAGCCACTATCGTTTCTCTATCTCCTGGTCGCGCATC
CTGCCCACGGGCACCGACGAGCAAATTAACGACCAGGGCATTGCGTTCTA
TAGCAACTTAATCAATGCCCTCCTCGAAGCAGGAATCCAGCCTGCCGTCA
CGTTATACCACTGGGATCTACCGCAAACACTACAAGAGCAGGGAGGATGG
CAGAATTCTTCGCTCATCGTCCCCGCCTTTGCCAAGTACGCGGACCTCTG
TTTTTACACCTTTGGCGACCGAGTCAAGATGTGGTTCACGATCAATGAGC
CTTGGTCCACTGCGGTGTTAGGGCACGGGATAGGGGTAATGGCCCCAGGT
ATAAAGGATCAAGAATGGGCTGTATACGTAGTCGGCCACACCCAATTGCT
GGCGCATGCGGCAGCCGTGAAGGTGTATCGGGACAAGCACCAGGATTAAC
AGAGAGGAAAGATTGGGATCGTCCTGTCAACACAGGTGGGTGAATGAAGG
GTGTGGGCGTGCCTGCGGCTGTGTTTCTCCCTCCCCTCTCCCTTCCCTTC
CTCCCTTCATGTGCGTCCCTCTCTTCCACATCCGTGCCTTTAAGTGCAAT
TTTACTTTCTACCTCTACTGATCCTGTTATTCGAACATCTTGCTAAATTT
CTCAATCTCCCATCACTTCCCATCTCCCCCTTTCTCAGTTTAAAGAGCCT
CTCTGCGACACCTCCCCTTCGGACATCGAGGCGGCCGAACGCAACCTACA
ATTCTATCTCGGCTGGTTCGCTTCACCCATATTTAATGGTGATTACCCGG
CAGTGATGCGTGAGAGGGTTGGGAAACGCCTGCCTTCGTTTTCGGGCGAG
GAAATGAAGGAGGTGAAAGGCTCGGTGGACTTTCTGGGTATCAACACATA
TGGGTCCTCCATGATCACGGATAGAGGAGGGAAAGGAGGTGGATATTTTG
CTGATGTGTCTACGGCGAGCACGGGCGACCCGGCGTGGTCTCAGGGAGAG
TCGAGCTGGTTGTGGATTGCACCTGCGGGGATGAGGAAGTTGTTGCGGTG
GGTGAAAGTAGAGTATGATTCGCCGGTTGTGTATGTGACTGAGAATGGAT
TGGACGTCGCGGGGGAGGAGCAGTGGGGGGAGGGCGGACAGGGAGGGGGG
TTTCGAAAGGACGCAGCGAGGGTGGATTATATCAAGAATTATTTGGCAGA
GGTGGGTAAGGCGAGAAAGTTCGATGGCGTGGACGTACGGGGTTATTTTG
TGTGGTCTTTATTGGACAATTTTGAGTGGGCAGAGGGGTTTTCGAGCAGG
TTTGGTTTGGTGAGGGTGATGTTTAAGGAGGGGCAGAAGAGGGTACCCAA
AGATTCTTTTTTTTCGTATCAAGAGCTGATTCGAAGGTTTGTGGCTTCCG
ATGGCAAAATGAGCGTAGGTGGAGGGGAAGGTGCCAATACTGCTGCTGCC
CCTCTGCCTCCAGCGCTGGTGGCGAAAGTGCCTCCCCCCGCTATTGCTGC
CTCTCCTGCTTTTACGATAGCTCCCGCAGGTGATCCAGGAGCGATGCTAC
CAGAAGCAGAGTTGCCATGAGCGGCAGGCTGGCCCACAGGAATAA back to topCoding sequence (CDS) from alignment at scaffold_26:250206..252850- >mRNA_8577 ID=mRNA_8577|Name=jgi.p|Nanoce1779_2|624015|organism=Nannochloropsis oceanica|type=CDS|length=5796bp|location=Sequence derived from alignment at scaffold_26:250206..252850- (Nannochloropsis oceanica) CTCCCGCAGGTGATCCAGGAGCGATGCTACCAGAAGCAGAGTTGCCATGA GCGGCAGGCTGGCCCACAGGAATAATTTAAAGAGCCTCTCTGCGACACCT CCCCTTCGGACATCGAGGCGGCCGAACGCAACCTACAATTCTATCTCGGC TGGTTCGCTTCACCCATATTTAATGGTGATTACCCGGCAGTGATGCGTGA GAGGGTTGGGAAACGCCTGCCTTCGTTTTCGGGCGAGGAAATGAAGGAGG TGAAAGGCTCGGTGGACTTTCTGGGTATCAACACATATGGGTCCTCCATG ATCACGGATAGAGGAGGGAAAGGAGGTGGATATTTTGCTGATGTGTCTAC GGCGAGCACGGGCGACCCGGCGTGGTCTCAGGGAGAGTCGAGCTGGTTGT GGATTGCACCTGCGGGGATGAGGAAGTTGTTGCGGTGGGTGAAAGTAGAG TATGATTCGCCGGTTGTGTATGTGACTGAGAATGGATTGGACGTCGCGGG GGAGGAGCAGTGGGGGGAGGGCGGACAGGGAGGGGGGTTTCGAAAGGACG CAGCGAGGGTGGATTATATCAAGAATTATTTGGCAGAGGTGGGTAAGGCG AGAAAGTTCGATGGCGTGGACGTACGGGGTTATTTTGTGTGGTCTTTATT GGACAATTTTGAGTGGGCAGAGGGGTTTTCGAGCAGGTTTGGTTTGGTGA GGGTGATGTTTAAGGAGGGGCAGAAGAGGAGATTTTTGCCTTGGAACCCC CCGTCTTCCCATCTGATTTTGTCTGGGGCGTGGCGACAAGCGCGTATCAA ATCGAAGGTGCTGTCAAGGAAGACGGCCGGGGAGCGTCTATATGGGATAT CTTTGCGCATACACCTGGCAAGATCTCGGGCGATACAACAGGGGACGTGG CTTGTGATCATTACCATCGATATGAGGAAGACATTGCATTGATGCGATCT CTCGGAGTGAGCCACTATCGTTTCTCTATCTCCTGGTCGCGCATCCTGCC CACGGGCACCGACGAGCAAATTAACGACCAGGGCATTGCGTTCTATAGCA ACTTAATCAATGCCCTCCTCGAAGCAGGAATCCAGCCTGCCGTCACGTTA TACCACTGGGATCTACCGCAAACACTACAAGAGCAGGGAGGATGGCAGAA TTCTTCGCTCATCGTCCCCGCCTTTGCCAAGTACGCGGACCTCTGTTTTT ACACCTTTGGCGACCGAGTCAAGATGTGGTTCACGATCAATGAGCCTTGG TCCACTGCGGTGTTAGGGCACGGGATAGGGGTAATGGCCCCAGGTATAAA GGATCAAGAATGGGCTGTATACGTAGTCGGCCACACCCAATTGCTGGCGC ATGCGGCAGCCGTGAAGATGAAGTGGTGGGGATTGTACGGCAGAAGTTAT TATTCAAAGAACGGCCCAAGCCCATTGTGTCGCGGCACTTGCTGCAGCGC TCCCGCAGGTGATCCAGGAGCGATGCTACCAGAAGCAGAGTTGCCATGAG CGGCAGGCTGGCCCACAGGAATAATTTAAAGAGCCTCTCTGCGACACCTC CCCTTCGGACATCGAGGCGGCCGAACGCAACCTACAATTCTATCTCGGCT GGTTCGCTTCACCCATATTTAATGGTGATTACCCGGCAGTGATGCGTGAG AGGGTTGGGAAACGCCTGCCTTCGTTTTCGGGCGAGGAAATGAAGGAGGT GAAAGGCTCGGTGGACTTTCTGGGTATCAACACATATGGGTCCTCCATGA TCACGGATAGAGGAGGGAAAGGAGGTGGATATTTTGCTGATGTGTCTACG GCGAGCACGGGCGACCCGGCGTGGTCTCAGGGAGAGTCGAGCTGGTTGTG GATTGCACCTGCGGGGATGAGGAAGTTGTTGCGGTGGGTGAAAGTAGAGT ATGATTCGCCGGTTGTGTATGTGACTGAGAATGGATTGGACGTCGCGGGG GAGGAGCAGTGGGGGGAGGGCGGACAGGGAGGGGGGTTTCGAAAGGACGC AGCGAGGGTGGATTATATCAAGAATTATTTGGCAGAGGTGGGTAAGGCGA GAAAGTTCGATGGCGTGGACGTACGGGGTTATTTTGTGTGGTCTTTATTG GACAATTTTGAGTGGGCAGAGGGGTTTTCGAGCAGGTTTGGTTTGGTGAG GGTGATGTTTAAGGAGGGGCAGAAGAGGAGATTTTTGCCTTGGAACCCCC CGTCTTCCCATCTGATTTTGTCTGGGGCGTGGCGACAAGCGCGTATCAAA TCGAAGGTGCTGTCAAGGAAGACGGCCGGGGAGCGTCTATATGGGATATC TTTGCGCATACACCTGGCAAGATCTCGGGCGATACAACAGGGGACGTGGC TTGTGATCATTACCATCGATATGAGGAAGACATTGCATTGATGCGATCTC TCGGAGTGAGCCACTATCGTTTCTCTATCTCCTGGTCGCGCATCCTGCCC ACGGGCACCGACGAGCAAATTAACGACCAGGGCATTGCGTTCTATAGCAA CTTAATCAATGCCCTCCTCGAAGCAGGAATCCAGCCTGCCGTCACGTTAT ACCACTGGGATCTACCGCAAACACTACAAGAGCAGGGAGGATGGCAGAAT TCTTCGCTCATCGTCCCCGCCTTTGCCAAGTACGCGGACCTCTGTTTTTA CACCTTTGGCGACCGAGTCAAGATGTGGTTCACGATCAATGAGCCTTGGT CCACTGCGGTGTTAGGGCACGGGATAGGGGTAATGGCCCCAGGTATAAAG GATCAAGAATGGGCTGTATACGTAGTCGGCCACACCCAATTGCTGGCGCA TGCGGCAGCCGTGAAGATGAAGTGGTGGGGATTGTACGGCAGAAGTTATT ATTCAAAGAACGGCCCAAGCCCATTGTGTCGCGGCACTTGCTGCAGCGCT CCCGCAGGTGATCCAGGAGCGATGCTACCAGAAGCAGAGTTGCCATGAGC GGCAGGCTGGCCCACAGGAATAATTTAAAGAGCCTCTCTGCGACACCTCC CCTTCGGACATCGAGGCGGCCGAACGCAACCTACAATTCTATCTCGGCTG GTTCGCTTCACCCATATTTAATGGTGATTACCCGGCAGTGATGCGTGAGA GGGTTGGGAAACGCCTGCCTTCGTTTTCGGGCGAGGAAATGAAGGAGGTG AAAGGCTCGGTGGACTTTCTGGGTATCAACACATATGGGTCCTCCATGAT CACGGATAGAGGAGGGAAAGGAGGTGGATATTTTGCTGATGTGTCTACGG CGAGCACGGGCGACCCGGCGTGGTCTCAGGGAGAGTCGAGCTGGTTGTGG ATTGCACCTGCGGGGATGAGGAAGTTGTTGCGGTGGGTGAAAGTAGAGTA TGATTCGCCGGTTGTGTATGTGACTGAGAATGGATTGGACGTCGCGGGGG AGGAGCAGTGGGGGGAGGGCGGACAGGGAGGGGGGTTTCGAAAGGACGCA GCGAGGGTGGATTATATCAAGAATTATTTGGCAGAGGTGGGTAAGGCGAG AAAGTTCGATGGCGTGGACGTACGGGGTTATTTTGTGTGGTCTTTATTGG ACAATTTTGAGTGGGCAGAGGGGTTTTCGAGCAGGTTTGGTTTGGTGAGG GTGATGTTTAAGGAGGGGCAGAAGAGGAGATTTTTGCCTTGGAACCCCCC GTCTTCCCATCTGATTTTGTCTGGGGCGTGGCGACAAGCGCGTATCAAAT CGAAGGTGCTGTCAAGGAAGACGGCCGGGGAGCGTCTATATGGGATATCT TTGCGCATACACCTGGCAAGATCTCGGGCGATACAACAGGGGACGTGGCT TGTGATCATTACCATCGATATGAGGAAGACATTGCATTGATGCGATCTCT CGGAGTGAGCCACTATCGTTTCTCTATCTCCTGGTCGCGCATCCTGCCCA CGGGCACCGACGAGCAAATTAACGACCAGGGCATTGCGTTCTATAGCAAC TTAATCAATGCCCTCCTCGAAGCAGGAATCCAGCCTGCCGTCACGTTATA CCACTGGGATCTACCGCAAACACTACAAGAGCAGGGAGGATGGCAGAATT CTTCGCTCATCGTCCCCGCCTTTGCCAAGTACGCGGACCTCTGTTTTTAC ACCTTTGGCGACCGAGTCAAGATGTGGTTCACGATCAATGAGCCTTGGTC CACTGCGGTGTTAGGGCACGGGATAGGGGTAATGGCCCCAGGTATAAAGG ATCAAGAATGGGCTGTATACGTAGTCGGCCACACCCAATTGCTGGCGCAT GCGGCAGCCGTGAAGATGAAGTGGTGGGGATTGTACGGCAGAAGTTATTA TTCAAAGAACGGCCCAAGCCCATTGTGTCGCGGCACTTGCTGCAGCGCTC CCGCAGGTGATCCAGGAGCGATGCTACCAGAAGCAGAGTTGCCATGAGCG GCAGGCTGGCCCACAGGAATAATTTAAAGAGCCTCTCTGCGACACCTCCC CTTCGGACATCGAGGCGGCCGAACGCAACCTACAATTCTATCTCGGCTGG TTCGCTTCACCCATATTTAATGGTGATTACCCGGCAGTGATGCGTGAGAG GGTTGGGAAACGCCTGCCTTCGTTTTCGGGCGAGGAAATGAAGGAGGTGA AAGGCTCGGTGGACTTTCTGGGTATCAACACATATGGGTCCTCCATGATC ACGGATAGAGGAGGGAAAGGAGGTGGATATTTTGCTGATGTGTCTACGGC GAGCACGGGCGACCCGGCGTGGTCTCAGGGAGAGTCGAGCTGGTTGTGGA TTGCACCTGCGGGGATGAGGAAGTTGTTGCGGTGGGTGAAAGTAGAGTAT GATTCGCCGGTTGTGTATGTGACTGAGAATGGATTGGACGTCGCGGGGGA GGAGCAGTGGGGGGAGGGCGGACAGGGAGGGGGGTTTCGAAAGGACGCAG CGAGGGTGGATTATATCAAGAATTATTTGGCAGAGGTGGGTAAGGCGAGA AAGTTCGATGGCGTGGACGTACGGGGTTATTTTGTGTGGTCTTTATTGGA CAATTTTGAGTGGGCAGAGGGGTTTTCGAGCAGGTTTGGTTTGGTGAGGG TGATGTTTAAGGAGGGGCAGAAGAGGAGATTTTTGCCTTGGAACCCCCCG TCTTCCCATCTGATTTTGTCTGGGGCGTGGCGACAAGCGCGTATCAAATC GAAGGTGCTGTCAAGGAAGACGGCCGGGGAGCGTCTATATGGGATATCTT TGCGCATACACCTGGCAAGATCTCGGGCGATACAACAGGGGACGTGGCTT GTGATCATTACCATCGATATGAGGAAGACATTGCATTGATGCGATCTCTC GGAGTGAGCCACTATCGTTTCTCTATCTCCTGGTCGCGCATCCTGCCCAC GGGCACCGACGAGCAAATTAACGACCAGGGCATTGCGTTCTATAGCAACT TAATCAATGCCCTCCTCGAAGCAGGAATCCAGCCTGCCGTCACGTTATAC CACTGGGATCTACCGCAAACACTACAAGAGCAGGGAGGATGGCAGAATTC TTCGCTCATCGTCCCCGCCTTTGCCAAGTACGCGGACCTCTGTTTTTACA CCTTTGGCGACCGAGTCAAGATGTGGTTCACGATCAATGAGCCTTGGTCC ACTGCGGTGTTAGGGCACGGGATAGGGGTAATGGCCCCAGGTATAAAGGA TCAAGAATGGGCTGTATACGTAGTCGGCCACACCCAATTGCTGGCGCATG CGGCAGCCGTGAAGATGAAGTGGTGGGGATTGTACGGCAGAAGTTATTAT TCAAAGAACGGCCCAAGCCCATTGTGTCGCGGCACTTGCTGCAGCG back to top
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