|
|
Properties
| Property Name | Value |
|---|
| TranscriptId | 603246 |
| Track | FilteredModels2 |
| ProteinId | 603160 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_26 | supercontig | scaffold_26:236548..238738 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8571 ID=mRNA_8571|Name=jgi.p|Nanoce1779_2|603160|organism=Nannochloropsis oceanica|type=mRNA|length=1208bp
ACAGAAGTCTCCACTCTTCGCCTCTAAAACCTCTTTTTAAATTATGAAGA
CCGCCGCTCTCCTCACTGTCTCCACCCTCATGGGCGCCCAGGCCTTTATG
GCCCCCGCCCCCAAGTTCTCCCGCACCCGCGGTGTTGCGCGCATGTCCTT
CGAGAACGAGGCCGGCGTCACCGCCCCTCTCGGATACTGGGACCCCCTGG
GCCTCTCCGCTGATGGGGACGTTGACAAGTTCAACCGTTACCGCGCCATT
GAGATCAAGCACGGCCGAGTCGCTATGTTGGCCATGCTCCACACCCTCAT
CACGGGCGCCGGTGTCACGCTCCCGGGCCTCGTGACCGCAGGTGACGGCA
TCCCCCAGTCCATGCCCTACGGCATTGGCGCCATCACCTCCGGTGCGTGG
GCCGCCCAGGGCTGGGCGCAGGTCTTGATCTTCTGCTCTGCCCTCGAGGT
GCTTGCCCCCCAGAAGGAGGACAAGATCCCCGGGGATGTCCAGCCCGACA
CGAGCGCATTCGCTAAGCTCGACGACAAGACCGAGGAGGAGGCGCTCAAG
TACCAGAACACTGAGATCAACAACGGCCGATTGGCGATGGTGGCTTGGAC
GGGCGCGACTGTCGGTGCCCTCCTGACCAACGGCGAGCACCCTGTGACCA
CCCTCCTCAACAAGTTGGGCTAAGCTTCTGTGGAAGAGCCAGTGGTAGTA
GCAGTAGCAGCAGCAGTAGCAGCCGCAGCACTCAGTGTTGGCGCGAGAGA
TTGTCCATCCCTTCTTAACCTACCGGAAGAGAAATAAGGCCTTTCTCCCG
TAGCTGTCTTCGTTTGTTTGTGCTGATTGCTTGGTATGAGAGTGTTGAAT
TCCTGCATCATGTTTTTCTCTGTAGTCCTTTCCTACCCCCGTCATTTTCT
TTTCTCCCTGGTTCTTCTTTTGTCACCCTTATTTTACATAAAATTTTCTT
TGTTTATAGTGAGAGGAAGGTAGAGAGGGGAAAACAAGAACAACGAACGC
AAGCGTGTGAAAGGAGGGCGAATAGAAGAGAAACAGATCTGTTGAGCATT
GAGAGTGGAGCCGGGGGAAAGGCTTGTGTGTTGTTTTTGAAAAAGTTGTT
TAAATCACGAATCCGTTAGTTCTCATGTGTACCTCTTTCACTACATGTGA
TGGAGAAAACAAAAGTGTGAGGATTAATTGAAGAAAAAGAAGAGTTCGAC
ACGTCAAA back to topprotein sequence of jgi.p|Nanoce1779_2|603160 >mRNA_8571-protein ID=mRNA_8571-protein|Name=jgi.p|Nanoce1779_2|603160|organism=Nannochloropsis oceanica|type=polypeptide|length=210bp
MKTAALLTVSTLMGAQAFMAPAPKFSRTRGVARMSFENEAGVTAPLGYWD
PLGLSADGDVDKFNRYRAIEIKHGRVAMLAMLHTLITGAGVTLPGLVTAG
DGIPQSMPYGIGAITSGAWAAQGWAQVLIFCSALEVLAPQKEDKIPGDVQ
PDTSAFAKLDDKTEEEALKYQNTEINNGRLAMVAWTGATVGALLTNGEHP
VTTLLNKLG* back to topmRNA from alignment at scaffold_26:236548..238738- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8571 ID=mRNA_8571|Name=jgi.p|Nanoce1779_2|603160|organism=Nannochloropsis oceanica|type=mRNA|length=2191bp|location=Sequence derived from alignment at scaffold_26:236548..238738- (Nannochloropsis oceanica)
ACAGAAGTCTCCACTCTTCGCCTCTAAAACCTCTTTTTAAATTATGGTAA
GTTCGTGCGGCAGTGGGTTTTCGGATCTATATTTGTCAAGATCCAGTTCA
AGGTCAGGGATGTAGATTAAGTACAGAAGGAGAAGCACAAGCGCGCCAGT
TCGCCCCTCACGGCCTGGAGCAGGGCATTTAATCCCTCTATCTTACCAGA
ACCATACTATACAACCAATCCTGTTGGCATCGCTCTGTCTATTTGTCGTG
CGTGCATGTGTCCATGGTGTGGTGGGGGGCAGGGGTTTTCGGGGTTGCGG
TTGAAGGCACCTTATCAGAAAGATGCCCTCAGAGATAGAGGTAGCCCCCT
CCCCCCGATCTTCGACCTGTCCTGTCAGGCGAACACTTTCACCCGTCGTT
CACCTCGATACACACAAGGAGTAGACCTCTGAAGTTCTAATTGTCATAAA
TGCCCCTCCCCCCTCCCTCCTTCCCTTCATCCTCCCCTCCGAGCAGAAGA
CCGCCGCTCTCCTCACTGTCTCCACCCTCATGGGCGCCCAGGCCTTTATG
GCCCCCGCCCCCAAGTTCTCCCGCACCCGCGGTGTTGCGCGCATGTCCTT
CGAGAACGAGGCCGGCGTCACCGCCCCTCTCGGATACTGGGTGAGTGCTT
CCCTCCTTCCCCGCCCTCTTCAGCCCAACACCAAGTTCCAAGTTTTGAGT
TTTAGTGGAACCCGTCGTCGCTCCTTCTCACCCTCCTTCTTTCCCTTCCT
CCCTTCTTAACAGGACCCCCTGGGCCTCTCCGCTGATGGGGACGTTGACA
AGTTCAACCGTTACCGCGCCATTGAGGTAAGGATCCGAGCGTTCTAAAAG
GGAGAGCTTACGCGAGCTTTTTATGTCCCCACACTCCCCATCCAACAAGA
ATACCGGTTTTTGCAGCTCAATCCCTCTCCCCCTGTCCCTTCGATCACTC
CCATCTCAGATCAAGCACGGCCGAGTCGCTATGTTGGCCATGCTCCACAC
CCTCATCACGGGCGCCGGTGTCACGGTATGTTCGCCTGTCTGGACCCTTC
GTTTCCTCCCTCCTTCCCTCCCCCGTCTCATGTTGGCCAATCTACGATTA
AAATACCAGACAAATCACTCACTCACACCGCCCTCCCTCCTTCCCTCCTT
TCTTCCTCGCTAGCTCCCGGGCCTCGTGACCGCAGGTGACGGCATCCCCC
AGTCCATGCCCTACGGCATTGGCGCCATCACCTCCGGTGCGTGGGCCGCC
CAGGGCTGGGCGCAGGTCTTGATCTTCTGCTCTGCCCTCGAGGTGCTTGC
CCCCCAGAAGGAGGACAAGATCCCCGGGGATGTCCAGCCCGACACGAGCG
CATTCGCTAAGCTCGACGACAAGACCGAGGAGGAGGCGCTCAAGTACCAG
AACACTGAGATCAACAACGGCCGGTACGTTCTGCGCGGAGGGAAGGGAAG
AGGGGAGGAGAAGTTTGAGGCGGTGGGACAGACGAAGCGGACGGCTAGTG
TCATGTGATTATTTTTTATTAACCATCCCTCCCCCTCTTTCCCTCCCTCC
CTCCCTTCCTAGATTGGCGATGGTGGCTTGGACGGGCGCGACTGTCGGTG
CCCTCCTGACCAACGGCGAGCACCCTGTGACCACCCTCCTCAACAAGTTG
GGCTAAGCTTCTGTGGAAGAGCCAGTGGTAGTAGCAGTAGCAGCAGCAGT
AGCAGCCGCAGCACTCAGTGTTGGCGCGAGAGATTGTCCATCCCTTCTTA
ACCTACCGGAAGAGAAATAAGGCCTTTCTCCCGTAGCTGTCTTCGTTTGT
TTGTGCTGATTGCTTGGTATGAGAGTGTTGAATTCCTGCATCATGTTTTT
CTCTGTAGTCCTTTCCTACCCCCGTCATTTTCTTTTCTCCCTGGTTCTTC
TTTTGTCACCCTTATTTTACATAAAATTTTCTTTGTTTATAGTGAGAGGA
AGGTAGAGAGGGGAAAACAAGAACAACGAACGCAAGCGTGTGAAAGGAGG
GCGAATAGAAGAGAAACAGATCTGTTGAGCATTGAGAGTGGAGCCGGGGG
AAAGGCTTGTGTGTTGTTTTTGAAAAAGTTGTTTAAATCACGAATCCGTT
AGTTCTCATGTGTACCTCTTTCACTACATGTGATGGAGAAAACAAAAGTG
TGAGGATTAATTGAAGAAAAAGAAGAGTTCGACACGTCAAA back to topCoding sequence (CDS) from alignment at scaffold_26:236548..238738- >mRNA_8571 ID=mRNA_8571|Name=jgi.p|Nanoce1779_2|603160|organism=Nannochloropsis oceanica|type=CDS|length=3780bp|location=Sequence derived from alignment at scaffold_26:236548..238738- (Nannochloropsis oceanica)
ATTGGCGATGGTGGCTTGGACGGGCGCGACTGTCGGTGCCCTCCTGACCA
ACGGCGAGCACCCTGTGACCACCCTCCTCAACAAGTTGGGCTAACTCCCG
GGCCTCGTGACCGCAGGTGACGGCATCCCCCAGTCCATGCCCTACGGCAT
TGGCGCCATCACCTCCGGTGCGTGGGCCGCCCAGGGCTGGGCGCAGGTCT
TGATCTTCTGCTCTGCCCTCGAGGTGCTTGCCCCCCAGAAGGAGGACAAG
ATCCCCGGGGATGTCCAGCCCGACACGAGCGCATTCGCTAAGCTCGACGA
CAAGACCGAGGAGGAGGCGCTCAAGTACCAGAACACTGAGATCAACAACG
GCCGATCAAGCACGGCCGAGTCGCTATGTTGGCCATGCTCCACACCCTCA
TCACGGGCGCCGGTGTCACGGACCCCCTGGGCCTCTCCGCTGATGGGGAC
GTTGACAAGTTCAACCGTTACCGCGCCATTGAGAAGACCGCCGCTCTCCT
CACTGTCTCCACCCTCATGGGCGCCCAGGCCTTTATGGCCCCCGCCCCCA
AGTTCTCCCGCACCCGCGGTGTTGCGCGCATGTCCTTCGAGAACGAGGCC
GGCGTCACCGCCCCTCTCGGATACTGGATGATTGGCGATGGTGGCTTGGA
CGGGCGCGACTGTCGGTGCCCTCCTGACCAACGGCGAGCACCCTGTGACC
ACCCTCCTCAACAAGTTGGGCTAACTCCCGGGCCTCGTGACCGCAGGTGA
CGGCATCCCCCAGTCCATGCCCTACGGCATTGGCGCCATCACCTCCGGTG
CGTGGGCCGCCCAGGGCTGGGCGCAGGTCTTGATCTTCTGCTCTGCCCTC
GAGGTGCTTGCCCCCCAGAAGGAGGACAAGATCCCCGGGGATGTCCAGCC
CGACACGAGCGCATTCGCTAAGCTCGACGACAAGACCGAGGAGGAGGCGC
TCAAGTACCAGAACACTGAGATCAACAACGGCCGATCAAGCACGGCCGAG
TCGCTATGTTGGCCATGCTCCACACCCTCATCACGGGCGCCGGTGTCACG
GACCCCCTGGGCCTCTCCGCTGATGGGGACGTTGACAAGTTCAACCGTTA
CCGCGCCATTGAGAAGACCGCCGCTCTCCTCACTGTCTCCACCCTCATGG
GCGCCCAGGCCTTTATGGCCCCCGCCCCCAAGTTCTCCCGCACCCGCGGT
GTTGCGCGCATGTCCTTCGAGAACGAGGCCGGCGTCACCGCCCCTCTCGG
ATACTGGATGATTGGCGATGGTGGCTTGGACGGGCGCGACTGTCGGTGCC
CTCCTGACCAACGGCGAGCACCCTGTGACCACCCTCCTCAACAAGTTGGG
CTAACTCCCGGGCCTCGTGACCGCAGGTGACGGCATCCCCCAGTCCATGC
CCTACGGCATTGGCGCCATCACCTCCGGTGCGTGGGCCGCCCAGGGCTGG
GCGCAGGTCTTGATCTTCTGCTCTGCCCTCGAGGTGCTTGCCCCCCAGAA
GGAGGACAAGATCCCCGGGGATGTCCAGCCCGACACGAGCGCATTCGCTA
AGCTCGACGACAAGACCGAGGAGGAGGCGCTCAAGTACCAGAACACTGAG
ATCAACAACGGCCGATCAAGCACGGCCGAGTCGCTATGTTGGCCATGCTC
CACACCCTCATCACGGGCGCCGGTGTCACGGACCCCCTGGGCCTCTCCGC
TGATGGGGACGTTGACAAGTTCAACCGTTACCGCGCCATTGAGAAGACCG
CCGCTCTCCTCACTGTCTCCACCCTCATGGGCGCCCAGGCCTTTATGGCC
CCCGCCCCCAAGTTCTCCCGCACCCGCGGTGTTGCGCGCATGTCCTTCGA
GAACGAGGCCGGCGTCACCGCCCCTCTCGGATACTGGATGATTGGCGATG
GTGGCTTGGACGGGCGCGACTGTCGGTGCCCTCCTGACCAACGGCGAGCA
CCCTGTGACCACCCTCCTCAACAAGTTGGGCTAACTCCCGGGCCTCGTGA
CCGCAGGTGACGGCATCCCCCAGTCCATGCCCTACGGCATTGGCGCCATC
ACCTCCGGTGCGTGGGCCGCCCAGGGCTGGGCGCAGGTCTTGATCTTCTG
CTCTGCCCTCGAGGTGCTTGCCCCCCAGAAGGAGGACAAGATCCCCGGGG
ATGTCCAGCCCGACACGAGCGCATTCGCTAAGCTCGACGACAAGACCGAG
GAGGAGGCGCTCAAGTACCAGAACACTGAGATCAACAACGGCCGATCAAG
CACGGCCGAGTCGCTATGTTGGCCATGCTCCACACCCTCATCACGGGCGC
CGGTGTCACGGACCCCCTGGGCCTCTCCGCTGATGGGGACGTTGACAAGT
TCAACCGTTACCGCGCCATTGAGAAGACCGCCGCTCTCCTCACTGTCTCC
ACCCTCATGGGCGCCCAGGCCTTTATGGCCCCCGCCCCCAAGTTCTCCCG
CACCCGCGGTGTTGCGCGCATGTCCTTCGAGAACGAGGCCGGCGTCACCG
CCCCTCTCGGATACTGGATGATTGGCGATGGTGGCTTGGACGGGCGCGAC
TGTCGGTGCCCTCCTGACCAACGGCGAGCACCCTGTGACCACCCTCCTCA
ACAAGTTGGGCTAACTCCCGGGCCTCGTGACCGCAGGTGACGGCATCCCC
CAGTCCATGCCCTACGGCATTGGCGCCATCACCTCCGGTGCGTGGGCCGC
CCAGGGCTGGGCGCAGGTCTTGATCTTCTGCTCTGCCCTCGAGGTGCTTG
CCCCCCAGAAGGAGGACAAGATCCCCGGGGATGTCCAGCCCGACACGAGC
GCATTCGCTAAGCTCGACGACAAGACCGAGGAGGAGGCGCTCAAGTACCA
GAACACTGAGATCAACAACGGCCGATCAAGCACGGCCGAGTCGCTATGTT
GGCCATGCTCCACACCCTCATCACGGGCGCCGGTGTCACGGACCCCCTGG
GCCTCTCCGCTGATGGGGACGTTGACAAGTTCAACCGTTACCGCGCCATT
GAGAAGACCGCCGCTCTCCTCACTGTCTCCACCCTCATGGGCGCCCAGGC
CTTTATGGCCCCCGCCCCCAAGTTCTCCCGCACCCGCGGTGTTGCGCGCA
TGTCCTTCGAGAACGAGGCCGGCGTCACCGCCCCTCTCGGATACTGGATG
ATTGGCGATGGTGGCTTGGACGGGCGCGACTGTCGGTGCCCTCCTGACCA
ACGGCGAGCACCCTGTGACCACCCTCCTCAACAAGTTGGGCTAACTCCCG
GGCCTCGTGACCGCAGGTGACGGCATCCCCCAGTCCATGCCCTACGGCAT
TGGCGCCATCACCTCCGGTGCGTGGGCCGCCCAGGGCTGGGCGCAGGTCT
TGATCTTCTGCTCTGCCCTCGAGGTGCTTGCCCCCCAGAAGGAGGACAAG
ATCCCCGGGGATGTCCAGCCCGACACGAGCGCATTCGCTAAGCTCGACGA
CAAGACCGAGGAGGAGGCGCTCAAGTACCAGAACACTGAGATCAACAACG
GCCGATCAAGCACGGCCGAGTCGCTATGTTGGCCATGCTCCACACCCTCA
TCACGGGCGCCGGTGTCACGGACCCCCTGGGCCTCTCCGCTGATGGGGAC
GTTGACAAGTTCAACCGTTACCGCGCCATTGAGAAGACCGCCGCTCTCCT
CACTGTCTCCACCCTCATGGGCGCCCAGGCCTTTATGGCCCCCGCCCCCA
AGTTCTCCCGCACCCGCGGTGTTGCGCGCATGTCCTTCGAGAACGAGGCC
GGCGTCACCGCCCCTCTCGGATACTGGATG back to top
|