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Properties
| Property Name | Value |
| TranscriptId | 603165 |
| Track | FilteredModels2 |
| ProteinId | 603079 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_26 | supercontig | scaffold_26:184093..186892 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8554 ID=mRNA_8554|Name=jgi.p|Nanoce1779_2|603079|organism=Nannochloropsis oceanica|type=mRNA|length=1487bp GCCCCTACTTTTCCATACATCGTCCTCATCTTCTGGCCTTTCCATCTCCT CCTCCTCGTCTTTCCCCTCCTCCTCCTCCTGCTGCCGCAATTGAACTGAT CCCCTCAAACGCAAATGCATCCCGGGGCTCTCTGTGCTGCTCACCACAGG CTCCACATACTCATCTTTCAATGTCACAGCACGTTGTCTCCTGTCTGCCG TCGCTGCTGTCAGGACAGTTTCTCGGCTCACCCAGGACTCTTGCAGAAGG GCGTCGATACAGGTAGCTCGGAGAAAATTGAGAAGCTGAGGAAGCTCGTT TCGATGCGAGACGGCTTGAATGACCGCGCAGCGCTCGTCATGACCGGCGT TGTCCATCGCGTTATACACGATCTGGAGAGGCAGAGGACAAAGGGGTGGA GAGGTCGTGTACAGCAAGGGCTTCGAAAGGGACAGAGCTGCGTCGGTTTT GGACGGAAATTTCCCCCTGCTTGTGCCAATATTTTGTCTCGCGCTTGAGC ACAGTCACAGCAATACCTGCGCCAGTGTACCATCGGCAAGTCATGAAGTT CCGCGCGGGCCTCGTGGCTAAGGACCTCAGCCTTTTGAATGGCGTGGCAC AATGCTTCGAAAAAATTGGCCCATCGTGCCTCATCTACTTGTCAGAGCGC TCGATCAAGTTCGCGTCACCTAAACTGGGCAGTGACGATGTCCGGGTCTT CAGTGAGATTGAGCAGGAGAAAATCTTCAGGGACTACCGCATCGAGAGCC TGGCTAACAACTCCATCCTCTTCGAGATCGGCCTGTCCAACCTTATCAAG TCCTTCACCTCTGCCAAAACCGCGCAGTTTGTGAAGCTGAAGCTGGCAAA AAGGGGCGGACAGCCGTGCATATGCCTAGAAGCCAGGGCGCTGGACATTG AGCTCCTCCACGAAATCCCTATCCGTGTCATGCGCGCCGCGGACATCCAG TACTACGCGCCTCCCGACGTGCCCGTGCCGCGGGTGCAGCTGGAGTTGCC CTACAACCGCTCCATGCGCACAGTGCTCGAGCGGTTCAAGAGCATGGACC GCTTTTGTTTCGTCGACGGGGACATGGGCGGATCTCTCAGGCTGCATGTG CAGAATGACAGGTGTCATGTGCAGACGTTTTATGGCAACTTGATACCGCG CTATTCGGAAGGTATGGCCGAGGACGAGGAGGGAAGGGAAGATGGAGGGA CAGGTTTTCCCTCCTGTTCCATCAAGCTGGACACACGCAGGCTGCTGGCG GCCTTGTACTTCTTGGGAGGGATCAAGTACGAGACTGCACTCTGCTGTCT GATAGAGGCGAGTTGCTTGGTGCTGCATGTGGCGTTGGGTGGACATGCGG GCTCTTTGACATACTACCTGCCTATCTATCTTGTGTAGGAGTAGGAGGCG GAGGTGGAAGAGGAAGAGGAGGAGGGGGAGAAGAAGACAAAAAAGGAGGA GAAGGAGGAGATGGATGGTGACTTGTGTCAGTTAGAG back to topprotein sequence of jgi.p|Nanoce1779_2|603079 >mRNA_8554-protein ID=mRNA_8554-protein|Name=jgi.p|Nanoce1779_2|603079|organism=Nannochloropsis oceanica|type=polypeptide|length=282bp MKFRAGLVAKDLSLLNGVAQCFEKIGPSCLIYLSERSIKFASPKLGSDDV RVFSEIEQEKIFRDYRIESLANNSILFEIGLSNLIKSFTSAKTAQFVKLK LAKRGGQPCICLEARALDIELLHEIPIRVMRAADIQYYAPPDVPVPRVQL ELPYNRSMRTVLERFKSMDRFCFVDGDMGGSLRLHVQNDRCHVQTFYGNL IPRYSEGMAEDEEGREDGGTGFPSCSIKLDTRRLLAALYFLGGIKYETAL CCLIEASCLVLHVALGGHAGSLTYYLPIYLV* back to topmRNA from alignment at scaffold_26:184093..186892+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8554 ID=mRNA_8554|Name=jgi.p|Nanoce1779_2|603079|organism=Nannochloropsis oceanica|type=mRNA|length=2800bp|location=Sequence derived from alignment at scaffold_26:184093..186892+ (Nannochloropsis oceanica) GCCCCTACTTTTCCATACATCGTCCTCATCTTCTGGCCTTTCCATCTCCT
CCTCCTCGTCTTTCCCCTCCTCCTCCTCCTGCTGCCGCAATTGAACTGAT
CCCCTCAAACGCAAATGCATCCCGGGGCTCTCTGTGCTGCTCACCACAGG
CTCCACATACTCATCTTTCAATGTCACAGCACGTTGTCTCCTGTCTGCCG
TCGCTGCTGTCAGGACAGTTTCTCGGCTCACCCAGGACTCTTGCAGAAGG
GCGTCGATACAGGTAGCTCGGAGAAAATTGAGAAGCTGAGGAAGCTCGTT
TCGATGCTGGGGGGGTGGGAAAGAGGGAGGGGAGGGAGGGGAGGGAGGGG
AGGGAGGGGTGTGGGGTGACGGGGAGGGAGGGGTGTGGGGTGACGGGGAG
GGAGGGTGAAGGGCAACGGTGGGACGGTATAGCAGCTATCATGACGCACC
GAGACGGCTTGAATGACCGCGCAGCGCTCGTCATGACCGGCGTTGTCCAT
CGCGTTATACACGATCTGGAGAGGCAGAGGACAAAGGGGTGGAGAGGTCG
TGTACAGCAAGGGCTTCGAAAGGGACAGAGCTGCGTCGGTTTTGGACGGA
AATTTCCCCCTGCTTGTGCCAATATTTTGTCTTTGTGTAGAGGATGTGCA
GTGGAGGTGATTTAGTCGACATGAGTTGTGTGAGTTGTTGCAATCGCTGA
GACTGCCTCCCCGCACCTCTGCGGCATCCCCGCGGTAGCAGAGGAGTCGT
TCTTCGTTTTTCGTTACTACCTTCTTAATCCCCATCCAACCTCCCTTCTT
ACCTCGCGCTTGAGCACAGTCACAGCAATACCTGCGCCAGTGTACCATCG
GCAAGTCATGAAGTTCCGCGCGGGCCTCGTGGCTAAGGACCTCAGCCTTT
TGAATGGTAATTCTTCCTCCCTTCCTGCCTCCATCCCTCACTCCCTTCCT
CACTCTCCCTCCCCTTTCCCCCACAACACGACACAAGGCGTGGCACAATG
CTTCGAAAAAATTGGCCCATCGTGCCTCATCTACTTGTCAGAGCGCTCGA
TCAAGTTCGCGTCACCTAAACTGGGCAGTGACGATGTCCGGGTCTTCAGT
GAGATTGAGCAGGTGAGGCGAGGCGGGGGGGTAAGAGAGGGAAGGGTGTG
AATGATGAGGGGAGTTGTGATGGGAAGAGAAGCAAGAGTGGCGTACAAAA
AGAGTAAGCTGCAACGCTATTGCATTGGTCTCGGTGCTATGTGCATGTAC
GTAGCATCAAATGTGCCTATTTGCCCTCCCTCCCCCTCCCCCCTCCCCTC
CCTTCCTTTGTCACTTCCCCCCTCCCTCCCTCCCTCCGTTTCAAACAGGA
GAAAATCTTCAGGGACTACCGCATCGAGAGCCTGGCTAACAACTCCATCC
TCTTCGAGATCGGCCTGTCCAACCTTATCAAGTCCTTCACCTCTGCCAAA
ACCGCGCAGTTTGTGAAGCTGAAGCTGGCAAAAAGGGGCGGACAGCCGTG
CATATGCCTAGAAGCCAGGGTAGGTTGGTCTGATTTCTCCCTGCCTGCCT
CCCTCCCTCTTCCCGTTCCTCCCAGTATCCTTCGCTCCTATGAAACGCGC
TAACGGCCAAGACCAAAGCCGACGAGGAAGTGATTGAACGCCAGCCCCTG
ACTCACCTCGCATCTGCCTGGAATCACGAGTCTGATTGAGGGAGGGGGAG
GGCAGAAAAGCTGCTTTCGATGCGAATTTTTTTTCACAACCTTCTTCCCT
CCCTCCCCCCCTCCCTCTCTCCTCCCCCCCTCCAGGCGCTGGACATTGAG
CTCCTCCACGAAATCCCTATCCGTGTCATGCGCGCCGCGGACATCCAGTA
CTACGCGCCTCCCGACGTGCCCGTGCCGCGGGTGCAGCTGGAGTTGCCCT
ACAACCGCTCCATGCGCACAGTGCTCGAGGTGAGGGAATGAAGGAGGCTA
GGGGGGAGGAAGGGAGGGGGGAAGGGGGTAAGGAAAGTGTGGGAAGGCAA
CGAAGGACGGGCACCCACTTATTCGCCTCCCCTCCCCCTTCCTCTCTCTC
TCACTCTTTCTCTCCATCCCTTCCCCCTTCACGTCAGCGGTTCAAGAGCA
TGGACCGCTTTTGTTTCGTCGACGGGGACATGGGCGGATCTCTCAGGCTG
CATGTGCAGAATGACAGGTGTCATGTGCAGACGTTTTATGGGTAACAAAG
GCAACGCCCGCCCGCCCCACTCCCTCGCTCCCTCCATCTCTTTTCCTTTT
CGTTTGCAAATGTTACGCCAATAATCATAAAACGGGGAGGAATGGAGGGA
GAAGGGAAGAAGGGAGGGAGGAAGGGAGCGAAGGAAGAGTGCTCCGGTTG
CGGGTGTAGAAAGATGTTATCGGAGGTGGAGGGTATAGTGGTTTCCTTAC
TCACCTTCTCTACCTCCCCACCTCCCCCCTCCTTCTGTTCCTCACCAGCA
ACTTGATACCGCGCTATTCGGAAGGTATGGCCGAGGACGAGGAGGGAAGG
GAAGATGGAGGGACAGGTTTTCCCTCCTGTTCCATCAAGCTGGACACACG
CAGGCTGCTGGCGGCCTTGTACTTCTTGGGAGGGATCAAGTACGAGACTG
CACTCTGCTGTCTGATAGAGGCGAGTTGCTTGGTGCTGCATGTGGCGTTG
GGTGGACATGCGGGCTCTTTGACATACTACCTGCCTATCTATCTTGTGTA
GGAGTAGGAGGCGGAGGTGGAAGAGGAAGAGGAGGAGGGGGAGAAGAAGA
CAAAAAAGGAGGAGAAGGAGGAGATGGATGGTGACTTGTGTCAGTTAGAG
back to topCoding sequence (CDS) from alignment at scaffold_26:184093..186892+ >mRNA_8554 ID=mRNA_8554|Name=jgi.p|Nanoce1779_2|603079|organism=Nannochloropsis oceanica|type=CDS|length=5076bp|location=Sequence derived from alignment at scaffold_26:184093..186892+ (Nannochloropsis oceanica) ATGAAGTTCCGCGCGGGCCTCGTGGCTAAGGACCTCAGCCTTTTGAATGG CGTGGCACAATGCTTCGAAAAAATTGGCCCATCGTGCCTCATCTACTTGT CAGAGCGCTCGATCAAGTTCGCGTCACCTAAACTGGGCAGTGACGATGTC CGGGTCTTCAGTGAGATTGAGCAGGAGAAAATCTTCAGGGACTACCGCAT CGAGAGCCTGGCTAACAACTCCATCCTCTTCGAGATCGGCCTGTCCAACC TTATCAAGTCCTTCACCTCTGCCAAAACCGCGCAGTTTGTGAAGCTGAAG CTGGCAAAAAGGGGCGGACAGCCGTGCATATGCCTAGAAGCCAGGGCGCT GGACATTGAGCTCCTCCACGAAATCCCTATCCGTGTCATGCGCGCCGCGG ACATCCAGTACTACGCGCCTCCCGACGTGCCCGTGCCGCGGGTGCAGCTG GAGTTGCCCTACAACCGCTCCATGCGCACAGTGCTCGAGCGGTTCAAGAG CATGGACCGCTTTTGTTTCGTCGACGGGGACATGGGCGGATCTCTCAGGC TGCATGTGCAGAATGACAGGTGTCATGTGCAGACGTTTTATGGCAACTTG ATACCGCGCTATTCGGAAGGTATGGCCGAGGACGAGGAGGGAAGGGAAGA TGGAGGGACAGGTTTTCCCTCCTGTTCCATCAAGCTGGACACACGCAGGC TGCTGGCGGCCTTGTACTTCTTGGGAGGGATCAAGTACGAGACTGCACTC TGCTGTCTGATAGAGGCGAGTTGCTTGGTGCTGCATGTGGCGTTGGGTGG ACATGCGGGCTCTTTGACATACTACCTGCCTATCTATCTTGTGTAGATGA AGTTCCGCGCGGGCCTCGTGGCTAAGGACCTCAGCCTTTTGAATGGCGTG GCACAATGCTTCGAAAAAATTGGCCCATCGTGCCTCATCTACTTGTCAGA GCGCTCGATCAAGTTCGCGTCACCTAAACTGGGCAGTGACGATGTCCGGG TCTTCAGTGAGATTGAGCAGGAGAAAATCTTCAGGGACTACCGCATCGAG AGCCTGGCTAACAACTCCATCCTCTTCGAGATCGGCCTGTCCAACCTTAT CAAGTCCTTCACCTCTGCCAAAACCGCGCAGTTTGTGAAGCTGAAGCTGG CAAAAAGGGGCGGACAGCCGTGCATATGCCTAGAAGCCAGGGCGCTGGAC ATTGAGCTCCTCCACGAAATCCCTATCCGTGTCATGCGCGCCGCGGACAT CCAGTACTACGCGCCTCCCGACGTGCCCGTGCCGCGGGTGCAGCTGGAGT TGCCCTACAACCGCTCCATGCGCACAGTGCTCGAGCGGTTCAAGAGCATG GACCGCTTTTGTTTCGTCGACGGGGACATGGGCGGATCTCTCAGGCTGCA TGTGCAGAATGACAGGTGTCATGTGCAGACGTTTTATGGCAACTTGATAC CGCGCTATTCGGAAGGTATGGCCGAGGACGAGGAGGGAAGGGAAGATGGA GGGACAGGTTTTCCCTCCTGTTCCATCAAGCTGGACACACGCAGGCTGCT GGCGGCCTTGTACTTCTTGGGAGGGATCAAGTACGAGACTGCACTCTGCT GTCTGATAGAGGCGAGTTGCTTGGTGCTGCATGTGGCGTTGGGTGGACAT GCGGGCTCTTTGACATACTACCTGCCTATCTATCTTGTGTAGATGAAGTT CCGCGCGGGCCTCGTGGCTAAGGACCTCAGCCTTTTGAATGGCGTGGCAC AATGCTTCGAAAAAATTGGCCCATCGTGCCTCATCTACTTGTCAGAGCGC TCGATCAAGTTCGCGTCACCTAAACTGGGCAGTGACGATGTCCGGGTCTT CAGTGAGATTGAGCAGGAGAAAATCTTCAGGGACTACCGCATCGAGAGCC TGGCTAACAACTCCATCCTCTTCGAGATCGGCCTGTCCAACCTTATCAAG TCCTTCACCTCTGCCAAAACCGCGCAGTTTGTGAAGCTGAAGCTGGCAAA AAGGGGCGGACAGCCGTGCATATGCCTAGAAGCCAGGGCGCTGGACATTG AGCTCCTCCACGAAATCCCTATCCGTGTCATGCGCGCCGCGGACATCCAG TACTACGCGCCTCCCGACGTGCCCGTGCCGCGGGTGCAGCTGGAGTTGCC CTACAACCGCTCCATGCGCACAGTGCTCGAGCGGTTCAAGAGCATGGACC GCTTTTGTTTCGTCGACGGGGACATGGGCGGATCTCTCAGGCTGCATGTG CAGAATGACAGGTGTCATGTGCAGACGTTTTATGGCAACTTGATACCGCG CTATTCGGAAGGTATGGCCGAGGACGAGGAGGGAAGGGAAGATGGAGGGA CAGGTTTTCCCTCCTGTTCCATCAAGCTGGACACACGCAGGCTGCTGGCG GCCTTGTACTTCTTGGGAGGGATCAAGTACGAGACTGCACTCTGCTGTCT GATAGAGGCGAGTTGCTTGGTGCTGCATGTGGCGTTGGGTGGACATGCGG GCTCTTTGACATACTACCTGCCTATCTATCTTGTGTAGATGAAGTTCCGC GCGGGCCTCGTGGCTAAGGACCTCAGCCTTTTGAATGGCGTGGCACAATG CTTCGAAAAAATTGGCCCATCGTGCCTCATCTACTTGTCAGAGCGCTCGA TCAAGTTCGCGTCACCTAAACTGGGCAGTGACGATGTCCGGGTCTTCAGT GAGATTGAGCAGGAGAAAATCTTCAGGGACTACCGCATCGAGAGCCTGGC TAACAACTCCATCCTCTTCGAGATCGGCCTGTCCAACCTTATCAAGTCCT TCACCTCTGCCAAAACCGCGCAGTTTGTGAAGCTGAAGCTGGCAAAAAGG GGCGGACAGCCGTGCATATGCCTAGAAGCCAGGGCGCTGGACATTGAGCT CCTCCACGAAATCCCTATCCGTGTCATGCGCGCCGCGGACATCCAGTACT ACGCGCCTCCCGACGTGCCCGTGCCGCGGGTGCAGCTGGAGTTGCCCTAC AACCGCTCCATGCGCACAGTGCTCGAGCGGTTCAAGAGCATGGACCGCTT TTGTTTCGTCGACGGGGACATGGGCGGATCTCTCAGGCTGCATGTGCAGA ATGACAGGTGTCATGTGCAGACGTTTTATGGCAACTTGATACCGCGCTAT TCGGAAGGTATGGCCGAGGACGAGGAGGGAAGGGAAGATGGAGGGACAGG TTTTCCCTCCTGTTCCATCAAGCTGGACACACGCAGGCTGCTGGCGGCCT TGTACTTCTTGGGAGGGATCAAGTACGAGACTGCACTCTGCTGTCTGATA GAGGCGAGTTGCTTGGTGCTGCATGTGGCGTTGGGTGGACATGCGGGCTC TTTGACATACTACCTGCCTATCTATCTTGTGTAGATGAAGTTCCGCGCGG GCCTCGTGGCTAAGGACCTCAGCCTTTTGAATGGCGTGGCACAATGCTTC GAAAAAATTGGCCCATCGTGCCTCATCTACTTGTCAGAGCGCTCGATCAA GTTCGCGTCACCTAAACTGGGCAGTGACGATGTCCGGGTCTTCAGTGAGA TTGAGCAGGAGAAAATCTTCAGGGACTACCGCATCGAGAGCCTGGCTAAC AACTCCATCCTCTTCGAGATCGGCCTGTCCAACCTTATCAAGTCCTTCAC CTCTGCCAAAACCGCGCAGTTTGTGAAGCTGAAGCTGGCAAAAAGGGGCG GACAGCCGTGCATATGCCTAGAAGCCAGGGCGCTGGACATTGAGCTCCTC CACGAAATCCCTATCCGTGTCATGCGCGCCGCGGACATCCAGTACTACGC GCCTCCCGACGTGCCCGTGCCGCGGGTGCAGCTGGAGTTGCCCTACAACC GCTCCATGCGCACAGTGCTCGAGCGGTTCAAGAGCATGGACCGCTTTTGT TTCGTCGACGGGGACATGGGCGGATCTCTCAGGCTGCATGTGCAGAATGA CAGGTGTCATGTGCAGACGTTTTATGGCAACTTGATACCGCGCTATTCGG AAGGTATGGCCGAGGACGAGGAGGGAAGGGAAGATGGAGGGACAGGTTTT CCCTCCTGTTCCATCAAGCTGGACACACGCAGGCTGCTGGCGGCCTTGTA CTTCTTGGGAGGGATCAAGTACGAGACTGCACTCTGCTGTCTGATAGAGG CGAGTTGCTTGGTGCTGCATGTGGCGTTGGGTGGACATGCGGGCTCTTTG ACATACTACCTGCCTATCTATCTTGTGTAGATGAAGTTCCGCGCGGGCCT CGTGGCTAAGGACCTCAGCCTTTTGAATGGCGTGGCACAATGCTTCGAAA AAATTGGCCCATCGTGCCTCATCTACTTGTCAGAGCGCTCGATCAAGTTC GCGTCACCTAAACTGGGCAGTGACGATGTCCGGGTCTTCAGTGAGATTGA GCAGGAGAAAATCTTCAGGGACTACCGCATCGAGAGCCTGGCTAACAACT CCATCCTCTTCGAGATCGGCCTGTCCAACCTTATCAAGTCCTTCACCTCT GCCAAAACCGCGCAGTTTGTGAAGCTGAAGCTGGCAAAAAGGGGCGGACA GCCGTGCATATGCCTAGAAGCCAGGGCGCTGGACATTGAGCTCCTCCACG AAATCCCTATCCGTGTCATGCGCGCCGCGGACATCCAGTACTACGCGCCT CCCGACGTGCCCGTGCCGCGGGTGCAGCTGGAGTTGCCCTACAACCGCTC CATGCGCACAGTGCTCGAGCGGTTCAAGAGCATGGACCGCTTTTGTTTCG TCGACGGGGACATGGGCGGATCTCTCAGGCTGCATGTGCAGAATGACAGG TGTCATGTGCAGACGTTTTATGGCAACTTGATACCGCGCTATTCGGAAGG TATGGCCGAGGACGAGGAGGGAAGGGAAGATGGAGGGACAGGTTTTCCCT CCTGTTCCATCAAGCTGGACACACGCAGGCTGCTGGCGGCCTTGTACTTC TTGGGAGGGATCAAGTACGAGACTGCACTCTGCTGTCTGATAGAGGCGAG TTGCTTGGTGCTGCATGTGGCGTTGGGTGGACATGCGGGCTCTTTGACAT ACTACCTGCCTATCTATCTTGTGTAG back to top
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