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Properties
| Property Name | Value |
|---|
| TranscriptId | 642036 |
| Track | FilteredModels2 |
| ProteinId | 641950 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_26 | supercontig | scaffold_26:183535..184592 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8553 ID=mRNA_8553|Name=jgi.p|Nanoce1779_2|641950|organism=Nannochloropsis oceanica|type=mRNA|length=915bp
ATGGACAACGCCGGTCATGACGAGCGCTGCGCGGTCATTCAAGCCGTCTC
GCATCGAAACGAGCTTCCTCAGCTTCTCAATTTTCTCCGAGCTACCTGTA
TCGACGCCCTTCTGCAAGAGTCCTGGGTGAGCCGAGAAACTGTCCTGACA
GCAGCGACGGCAGACAGGAGACAACGTGCTGTGACATTGAAAGATGAGTA
TGTGGAGCCTGTGGTGAGCAGCACAGAGAGCCCCGGGATGCATTTGCGTT
TGAGGGGATCAGTTCAATTGCGGCAGCAGGAGGAGGAGGAGGGGAAAGAC
GAGGAGGAGGAGATGGAAAGGCCAGAAGATGAGGACGATGTATGGAAAAG
TAGGGGCCGGAGGAAAGGAGGGGGGAAGGGAGGGAGAAAGGGGGGGAGGA
AGGGAATGGCTAGGCGAGTGGTGGTGTACGAAGAGCGGGACATTCGGTCG
AGCGCTGAGGCATTAATTCGTCGCCGCGTGACGACACTTGTACATGGAGA
GGAAATCGAGGAGGAGGACAATGCGGAGGTCGAGGAGGACGTGGCACGAA
ACGGCACCAACAGGAGGGAAAAGGGGGTAGAAGCGTTTATGCAGTTTCAG
GGGTGTGTGCCTCGCTCTTCAGCACTGTTGAAGAGAGGGATTAGATGTCA
GTTTACCAGAGATGTTCGTTTGGCCGTCTTTACTGTGGTTGTTGGACAGC
AGCAGCAGCAGCAGCAGCAGCAGGTGATGATTGGAGGGGAGGGGTACCCG
CTTGGCATCGGCAGCGGTCCCACAGAAGAGGAGGGTGGGAGAGAAGGAGA
GGGTGATACGAGAGACCTGCTGCTGGTTGAGCTGGAGGCACCTGTGGGGG
CACATAAGGGTGTTTTGGGGGCCATCGAGGCTGTCAAGAACGCTGCTGCA
GTTCTGCAAGAGTAA back to topprotein sequence of jgi.p|Nanoce1779_2|641950 >mRNA_8553-protein ID=mRNA_8553-protein|Name=jgi.p|Nanoce1779_2|641950|organism=Nannochloropsis oceanica|type=polypeptide|length=305bp
MDNAGHDERCAVIQAVSHRNELPQLLNFLRATCIDALLQESWVSRETVLT
AATADRRQRAVTLKDEYVEPVVSSTESPGMHLRLRGSVQLRQQEEEEGKD
EEEEMERPEDEDDVWKSRGRRKGGGKGGRKGGRKGMARRVVVYEERDIRS
SAEALIRRRVTTLVHGEEIEEEDNAEVEEDVARNGTNRREKGVEAFMQFQ
GCVPRSSALLKRGIRCQFTRDVRLAVFTVVVGQQQQQQQQQVMIGGEGYP
LGIGSGPTEEEGGREGEGDTRDLLLVELEAPVGAHKGVLGAIEAVKNAAA
VLQE* back to topmRNA from alignment at scaffold_26:183535..184592- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8553 ID=mRNA_8553|Name=jgi.p|Nanoce1779_2|641950|organism=Nannochloropsis oceanica|type=mRNA|length=1058bp|location=Sequence derived from alignment at scaffold_26:183535..184592- (Nannochloropsis oceanica)
ATGGACAACGCCGGTCATGACGAGCGCTGCGCGGTCATTCAAGCCGTCTC
GGTGCGTCATGATAGCTGCTATACCGTCCCACCGTTGCCCTTCACCCTCC
CTCCCCGTCACCCCACACCCCTCCCTCCCCGTCACCCCACACCCCTCCCT
CCCCTCCCTCCCCTCCCTCCCCTCCCTCTTTCCCACCCCCCCAGCATCGA
AACGAGCTTCCTCAGCTTCTCAATTTTCTCCGAGCTACCTGTATCGACGC
CCTTCTGCAAGAGTCCTGGGTGAGCCGAGAAACTGTCCTGACAGCAGCGA
CGGCAGACAGGAGACAACGTGCTGTGACATTGAAAGATGAGTATGTGGAG
CCTGTGGTGAGCAGCACAGAGAGCCCCGGGATGCATTTGCGTTTGAGGGG
ATCAGTTCAATTGCGGCAGCAGGAGGAGGAGGAGGGGAAAGACGAGGAGG
AGGAGATGGAAAGGCCAGAAGATGAGGACGATGTATGGAAAAGTAGGGGC
CGGAGGAAAGGAGGGGGGAAGGGAGGGAGAAAGGGGGGGAGGAAGGGAAT
GGCTAGGCGAGTGGTGGTGTACGAAGAGCGGGACATTCGGTCGAGCGCTG
AGGCATTAATTCGTCGCCGCGTGACGACACTTGTACATGGAGAGGAAATC
GAGGAGGAGGACAATGCGGAGGTCGAGGAGGACGTGGCACGAAACGGCAC
CAACAGGAGGGAAAAGGGGGTAGAAGCGTTTATGCAGTTTCAGGGGTGTG
TGCCTCGCTCTTCAGCACTGTTGAAGAGAGGGATTAGATGTCAGTTTACC
AGAGATGTTCGTTTGGCCGTCTTTACTGTGGTTGTTGGACAGCAGCAGCA
GCAGCAGCAGCAGCAGGTGATGATTGGAGGGGAGGGGTACCCGCTTGGCA
TCGGCAGCGGTCCCACAGAAGAGGAGGGTGGGAGAGAAGGAGAGGGTGAT
ACGAGAGACCTGCTGCTGGTTGAGCTGGAGGCACCTGTGGGGGCACATAA
GGGTGTTTTGGGGGCCATCGAGGCTGTCAAGAACGCTGCTGCAGTTCTGC
AAGAGTAA back to topCoding sequence (CDS) from alignment at scaffold_26:183535..184592- >mRNA_8553 ID=mRNA_8553|Name=jgi.p|Nanoce1779_2|641950|organism=Nannochloropsis oceanica|type=CDS|length=1830bp|location=Sequence derived from alignment at scaffold_26:183535..184592- (Nannochloropsis oceanica)
CATCGAAACGAGCTTCCTCAGCTTCTCAATTTTCTCCGAGCTACCTGTAT
CGACGCCCTTCTGCAAGAGTCCTGGGTGAGCCGAGAAACTGTCCTGACAG
CAGCGACGGCAGACAGGAGACAACGTGCTGTGACATTGAAAGATGAGTAT
GTGGAGCCTGTGGTGAGCAGCACAGAGAGCCCCGGGATGCATTTGCGTTT
GAGGGGATCAGTTCAATTGCGGCAGCAGGAGGAGGAGGAGGGGAAAGACG
AGGAGGAGGAGATGGAAAGGCCAGAAGATGAGGACGATGTATGGAAAAGT
AGGGGCCGGAGGAAAGGAGGGGGGAAGGGAGGGAGAAAGGGGGGGAGGAA
GGGAATGGCTAGGCGAGTGGTGGTGTACGAAGAGCGGGACATTCGGTCGA
GCGCTGAGGCATTAATTCGTCGCCGCGTGACGACACTTGTACATGGAGAG
GAAATCGAGGAGGAGGACAATGCGGAGGTCGAGGAGGACGTGGCACGAAA
CGGCACCAACAGGAGGGAAAAGGGGGTAGAAGCGTTTATGCAGTTTCAGG
GGTGTGTGCCTCGCTCTTCAGCACTGTTGAAGAGAGGGATTAGATGTCAG
TTTACCAGAGATGTTCGTTTGGCCGTCTTTACTGTGGTTGTTGGACAGCA
GCAGCAGCAGCAGCAGCAGCAGGTGATGATTGGAGGGGAGGGGTACCCGC
TTGGCATCGGCAGCGGTCCCACAGAAGAGGAGGGTGGGAGAGAAGGAGAG
GGTGATACGAGAGACCTGCTGCTGGTTGAGCTGGAGGCACCTGTGGGGGC
ACATAAGGGTGTTTTGGGGGCCATCGAGGCTGTCAAGAACGCTGCTGCAG
TTCTGCAAGAGTAAATGGACAACGCCGGTCATGACGAGCGCTGCGCGGTC
ATTCAAGCCGTCTCGCATCGAAACGAGCTTCCTCAGCTTCTCAATTTTCT
CCGAGCTACCTGTATCGACGCCCTTCTGCAAGAGTCCTGGGTGAGCCGAG
AAACTGTCCTGACAGCAGCGACGGCAGACAGGAGACAACGTGCTGTGACA
TTGAAAGATGAGTATGTGGAGCCTGTGGTGAGCAGCACAGAGAGCCCCGG
GATGCATTTGCGTTTGAGGGGATCAGTTCAATTGCGGCAGCAGGAGGAGG
AGGAGGGGAAAGACGAGGAGGAGGAGATGGAAAGGCCAGAAGATGAGGAC
GATGTATGGAAAAGTAGGGGCCGGAGGAAAGGAGGGGGGAAGGGAGGGAG
AAAGGGGGGGAGGAAGGGAATGGCTAGGCGAGTGGTGGTGTACGAAGAGC
GGGACATTCGGTCGAGCGCTGAGGCATTAATTCGTCGCCGCGTGACGACA
CTTGTACATGGAGAGGAAATCGAGGAGGAGGACAATGCGGAGGTCGAGGA
GGACGTGGCACGAAACGGCACCAACAGGAGGGAAAAGGGGGTAGAAGCGT
TTATGCAGTTTCAGGGGTGTGTGCCTCGCTCTTCAGCACTGTTGAAGAGA
GGGATTAGATGTCAGTTTACCAGAGATGTTCGTTTGGCCGTCTTTACTGT
GGTTGTTGGACAGCAGCAGCAGCAGCAGCAGCAGCAGGTGATGATTGGAG
GGGAGGGGTACCCGCTTGGCATCGGCAGCGGTCCCACAGAAGAGGAGGGT
GGGAGAGAAGGAGAGGGTGATACGAGAGACCTGCTGCTGGTTGAGCTGGA
GGCACCTGTGGGGGCACATAAGGGTGTTTTGGGGGCCATCGAGGCTGTCA
AGAACGCTGCTGCAGTTCTGCAAGAGTAAATGGACAACGCCGGTCATGAC
GAGCGCTGCGCGGTCATTCAAGCCGTCTCG back to top
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