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Properties
| Property Name | Value |
|---|
| TranscriptId | 602996 |
| Track | FilteredModels2 |
| ProteinId | 602910 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_26 | supercontig | scaffold_26:90864..93202 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8515 ID=mRNA_8515|Name=jgi.p|Nanoce1779_2|602910|organism=Nannochloropsis oceanica|type=mRNA|length=1827bp
CAGGTCAAATACAATCAAGGCGGGCAGTGCATCCGCGTATATAGAGACCG
CCAGCACAAGCCACGCATTATGCCCACAACAGGTCCTGTTCCCCCCTCAC
CCCAACCTCCACATGTCCATGCCACGAGCGCCGCAGCAGCAAAGGTGGTG
TTGCTCCCAACTCCTGTCACCTTTGCCATCGCCATGGCAAGTGGTGTCTC
TGGTTGGCTCTTTGTTCATCCTGCAGACGTCGTCAAGGTTCGAATGCAGC
TCTCGGGCAAATCTGGAGGAGGCATGGTGCTGACGGCACAAAACATCATG
AAACAAGAAGGCTTTGCAGGCCTGTACAGCGGGCTGTCCGCGGCCATTGC
GCGTCAGATGAGCTACACCACCTTGCGCCTGGGGTTCTTCGATGAGATCA
AAGCCCTTGTCGCTCAGCAACAGATCCAAGAAAGCGGCTTCACCCGCTCC
ATGTCGGCCATGACGGCCGGTGCCTGCGCCTCATTCCTGGCCTGTCCTGT
CGAAGTCTGTCTTGTTAGAATGCAGGCCGACGGCAAACTGCCCAAGGCGG
AGCAGCGGGGCTACAAGCACGTAGGTGACGCCTTATTGCGCGTAGCAAAG
GAGGAGGGCGTACTCACCTATTGGCGAGGGGCAGGGCCGACCGTGTTACG
GGCCATGGTGGTCTCCACCACCCAGCTAGGCACTTATGACCAGGCAAAGG
TGACCTTTCAAGAGGGAGGCATGCCCGACGGCACAGGCCTCCATTTGGCC
TCGTCCCTGACGGCAGGTTTGGTGTATTCCCTTGCCTCACTGCCTTTGGA
CACGGCCAAGACGCGGATGCAGACTCAGGGGGCGCCGAGCACACAAGGAG
GGCAGTTGTTGTACAGGTCCACGGGGCAGACGCTCATGAAGATTGCGGCA
GAGGAAGGGGTGCGCGGGTTGTGGAAGGGCTTCGGTGCCTACTTCTTGCG
AGGAGGGGGGCATACGGTCTTCATGTTCTTGTTTTATGAGCAATACCGTG
CTTTCGCAAAGTCATTTTATGTGTAAAGTGAATCGCTTAGCTTAGGGATA
CATGGGGACGAGTACAAGGTAGCGGAGGGGGTGTGGAAAAGTGAGAACAA
TTTTGATTGAAACCATCGCGCCGCCCGCTACGGTAGGGATGAACTGTGTG
AGGCTGTATGCCATCAGGGCCTGTGTCGGGAGGTATTCGATGGAAAGAAA
AAAAAAGTAAGTTCAACAACGGCTTGTTCCTGTTGACTGACAGCTTTACG
TTGCCGTGCTTTGAGTGAGTGGTGTCTCGCGTAACATTATCCAAATCCAC
AGCTCTAAGGAACAGGTCTCTATCAAGTGCTTGTGCTGCCTGATCTTAGT
CTTTGCGGAGGAAAAGCGGCACAGTCAAAACGCTGGCTGACGTAAGCGTG
CTTGGACCATGGACATGGGACCAGGGGTGTGTTGATAAGAAGCAATCAAC
TCAAGATTTCCGACTATTTCCCCATCCAACGACCCCACATAGACGCATTA
ATTAGGGTGCCATAGGTCTCCAGCCCCTCGAGGTCGTCAGTCCCTCCTCC
TTGCACCAGTCACCACCTCCGCTTCCCGCCCTCCGCCTTCCCGGCCCTCC
TATTCCAACCCAACGAGAAGGAGAAGGAGTCGCAGGACCCGCCGCAGCAA
CCACCTCCAATACCGGGACGGCTACAGGCACGGCCATGGTAAACTACGGG
GGAAAAGGCCCGAAGCCCACCACGCACGTCCAAAAGGTGGCCCTGGTGAT
CGCACATGTCTGCGCTGTGGTCTCAGTCATCCTCGTATCGCGATGGGCTA
ATGGGACGGGGGAAGGCTTCTTGGGGG back to topprotein sequence of jgi.p|Nanoce1779_2|602910 >mRNA_8515-protein ID=mRNA_8515-protein|Name=jgi.p|Nanoce1779_2|602910|organism=Nannochloropsis oceanica|type=polypeptide|length=319bp
MPTTGPVPPSPQPPHVHATSAAAAKVVLLPTPVTFAIAMASGVSGWLFVH
PADVVKVRMQLSGKSGGGMVLTAQNIMKQEGFAGLYSGLSAAIARQMSYT
TLRLGFFDEIKALVAQQQIQESGFTRSMSAMTAGACASFLACPVEVCLVR
MQADGKLPKAEQRGYKHVGDALLRVAKEEGVLTYWRGAGPTVLRAMVVST
TQLGTYDQAKVTFQEGGMPDGTGLHLASSLTAGLVYSLASLPLDTAKTRM
QTQGAPSTQGGQLLYRSTGQTLMKIAAEEGVRGLWKGFGAYFLRGGGHTV
FMFLFYEQYRAFAKSFYV* back to topmRNA from alignment at scaffold_26:90864..93202- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8515 ID=mRNA_8515|Name=jgi.p|Nanoce1779_2|602910|organism=Nannochloropsis oceanica|type=mRNA|length=2339bp|location=Sequence derived from alignment at scaffold_26:90864..93202- (Nannochloropsis oceanica)
CAGGTCAAATACAATCAAGGCGGGCAGTGCATCCGCGTATATAGAGACCG
CCAGCACAAGCCACGCATTATGCCCACAACAGGTCCTGTTCCCCCCTCAC
CCCAACCTCCACATGTCCATGCCACGAGCGCCGCAGCAGCAAAGGTGGTG
TTGCTCCCAACTCCTGTCACCTTTGCCATCGCCATGGCAAGTGGTGTCTC
TGGTTGGCTCTTTGTTCATCCTGCAGACGTCGTCAAGGTCAGTGTGGTGA
CGGGTGCTTTTGCCTCCGTTATGTGTGCCCGCTTGACTAAATCCCTCCAT
TGCGGCCGCCACATCTCCCTTTCCACGCTCTCCTTCAGGTTCGAATGCAG
CTCTCGGGCAAATCTGGAGGAGGCATGGTGCTGACGGCACAAAACATCAT
GAAACAAGAAGGCTTTGCAGGTACGACGCGGGGTGGGTGTGGGTGTGGGG
GGGGCGCCGCAGACGCGGCCCATCGGCCTCTCCGAGCGAGCAGGAAGGCT
CCAATGGCTTCATCAACCCGACTCGCCATCAACAGCATGAGCCTTCTATG
GGTTTCTGGTGTCTTTTTGTATCGCTGCTCAATAGCAATGCCACGTCGCA
TCATGTATGTGTTCCCGCGCACCATGCCTGCAATGTTTCTCCCCATCTTT
TACCTTCTCCTCTTTCGTCTTTAGCCTCGATCAGACGCAGCAGGAGCTCG
GACTTTCGCCTCCTCAGATTACATATTGATTCTTCATTATATGGTTCGGT
GTTCATCGTCTTACTTGTTCTCCATCTCATGAATATCTCATGGTTATCCC
TCTTGCTCCTTCTCTTTCCCCCCCCCCCAAGGCCTGTACAGCGGGCTGTC
CGCGGCCATTGCGCGTCAGATGAGCTACACCACCTTGCGCCTGGGGTTCT
TCGATGAGATCAAAGCCCTTGTCGCTCAGCAACAGATCCAAGAAAGCGGC
TTCACCCGCTCCATGTCGGCCATGACGGCCGGTGCCTGCGCCTCATTCCT
GGCCTGTCCTGTCGAAGTCTGTCTTGTTAGAATGCAGGCCGACGGCAAAC
TGCCCAAGGCGGAGCAGCGGGGCTACAAGCACGTAGGTGACGCCTTATTG
CGCGTAGCAAAGGAGGAGGGCGTACTCACCTATTGGCGAGGGGCAGGGCC
GACCGTGTTACGGGCCATGGTGGTCTCCACCACCCAGCTAGGCACTTATG
ACCAGGCAAAGGTGACCTTTCAAGAGGGAGGCATGCCCGACGGCACAGGC
CTCCATTTGGCCTCGTCCCTGACGGCAGGTTTGGTGTATTCCCTTGCCTC
ACTGCCTTTGGACACGGCCAAGACGCGGATGCAGACTCAGGGGGCGCCGA
GCACACAAGGAGGGCAGTTGTTGTACAGGTCCACGGGGCAGACGCTCATG
AAGATTGCGGCAGAGGAAGGGGTGCGCGGGTTGTGGAAGGGCTTCGGTGC
CTACTTCTTGCGAGGAGGGGGGCATACGGTCTTCATGTTCTTGTTTTATG
AGCAATACCGTGCTTTCGCAAAGTCATTTTATGTGTAAAGTGAATCGCTT
AGCTTAGGGATACATGGGGACGAGTACAAGGTAGCGGAGGGGGTGTGGAA
AAGTGAGAACAATTTTGATTGAAACCATCGCGCCGCCCGCTACGGTAGGG
ATGAACTGTGTGAGGCTGTATGCCATCAGGGCCTGTGTCGGGAGGTATTC
GATGGAAAGAAAAAAAAAGTAAGTTCAACAACGGCTTGTTCCTGTTGACT
GACAGCTTTACGTTGCCGTGCTTTGAGTGAGTGGTGTCTCGCGTAACATT
ATCCAAATCCACAGCTCTAAGGAACAGGTCTCTATCAAGTGCTTGTGCTG
CCTGATCTTAGTCTTTGCGGAGGAAAAGCGGCACAGTCAAAACGCTGGCT
GACGTAAGCGTGCTTGGACCATGGACATGGGACCAGGGGTGTGTTGATAA
GAAGCAATCAACTCAAGATTTCCGACTATTTCCCCATCCAACGACCCCAC
ATAGACGCATTAATTAGGGTGCCATAGGTCTCCAGCCCCTCGAGGTCGTC
AGTCCCTCCTCCTTGCACCAGTCACCACCTCCGCTTCCCGCCCTCCGCCT
TCCCGGCCCTCCTATTCCAACCCAACGAGAAGGAGAAGGAGTCGCAGGAC
CCGCCGCAGCAACCACCTCCAATACCGGGACGGCTACAGGCACGGCCATG
GTAAACTACGGGGGAAAAGGCCCGAAGCCCACCACGCACGTCCAAAAGGT
GGCCCTGGTGATCGCACATGTCTGCGCTGTGGTCTCAGTCATCCTCGTAT
CGCGATGGGCTAATGGGACGGGGGAAGGCTTCTTGGGGG back to topCoding sequence (CDS) from alignment at scaffold_26:90864..93202- >mRNA_8515 ID=mRNA_8515|Name=jgi.p|Nanoce1779_2|602910|organism=Nannochloropsis oceanica|type=CDS|length=2871bp|location=Sequence derived from alignment at scaffold_26:90864..93202- (Nannochloropsis oceanica)
GCCTGTACAGCGGGCTGTCCGCGGCCATTGCGCGTCAGATGAGCTACACC
ACCTTGCGCCTGGGGTTCTTCGATGAGATCAAAGCCCTTGTCGCTCAGCA
ACAGATCCAAGAAAGCGGCTTCACCCGCTCCATGTCGGCCATGACGGCCG
GTGCCTGCGCCTCATTCCTGGCCTGTCCTGTCGAAGTCTGTCTTGTTAGA
ATGCAGGCCGACGGCAAACTGCCCAAGGCGGAGCAGCGGGGCTACAAGCA
CGTAGGTGACGCCTTATTGCGCGTAGCAAAGGAGGAGGGCGTACTCACCT
ATTGGCGAGGGGCAGGGCCGACCGTGTTACGGGCCATGGTGGTCTCCACC
ACCCAGCTAGGCACTTATGACCAGGCAAAGGTGACCTTTCAAGAGGGAGG
CATGCCCGACGGCACAGGCCTCCATTTGGCCTCGTCCCTGACGGCAGGTT
TGGTGTATTCCCTTGCCTCACTGCCTTTGGACACGGCCAAGACGCGGATG
CAGACTCAGGGGGCGCCGAGCACACAAGGAGGGCAGTTGTTGTACAGGTC
CACGGGGCAGACGCTCATGAAGATTGCGGCAGAGGAAGGGGTGCGCGGGT
TGTGGAAGGGCTTCGGTGCCTACTTCTTGCGAGGAGGGGGGCATACGGTC
TTCATGTTCTTGTTTTATGAGCAATACCGTGCTTTCGCAAAGTCATTTTA
TGTGTAAGTTCGAATGCAGCTCTCGGGCAAATCTGGAGGAGGCATGGTGC
TGACGGCACAAAACATCATGAAACAAGAAGGCTTTGCAGATGCCCACAAC
AGGTCCTGTTCCCCCCTCACCCCAACCTCCACATGTCCATGCCACGAGCG
CCGCAGCAGCAAAGGTGGTGTTGCTCCCAACTCCTGTCACCTTTGCCATC
GCCATGGCAAGTGGTGTCTCTGGTTGGCTCTTTGTTCATCCTGCAGACGT
CGTCAAGGCCTGTACAGCGGGCTGTCCGCGGCCATTGCGCGTCAGATGAG
CTACACCACCTTGCGCCTGGGGTTCTTCGATGAGATCAAAGCCCTTGTCG
CTCAGCAACAGATCCAAGAAAGCGGCTTCACCCGCTCCATGTCGGCCATG
ACGGCCGGTGCCTGCGCCTCATTCCTGGCCTGTCCTGTCGAAGTCTGTCT
TGTTAGAATGCAGGCCGACGGCAAACTGCCCAAGGCGGAGCAGCGGGGCT
ACAAGCACGTAGGTGACGCCTTATTGCGCGTAGCAAAGGAGGAGGGCGTA
CTCACCTATTGGCGAGGGGCAGGGCCGACCGTGTTACGGGCCATGGTGGT
CTCCACCACCCAGCTAGGCACTTATGACCAGGCAAAGGTGACCTTTCAAG
AGGGAGGCATGCCCGACGGCACAGGCCTCCATTTGGCCTCGTCCCTGACG
GCAGGTTTGGTGTATTCCCTTGCCTCACTGCCTTTGGACACGGCCAAGAC
GCGGATGCAGACTCAGGGGGCGCCGAGCACACAAGGAGGGCAGTTGTTGT
ACAGGTCCACGGGGCAGACGCTCATGAAGATTGCGGCAGAGGAAGGGGTG
CGCGGGTTGTGGAAGGGCTTCGGTGCCTACTTCTTGCGAGGAGGGGGGCA
TACGGTCTTCATGTTCTTGTTTTATGAGCAATACCGTGCTTTCGCAAAGT
CATTTTATGTGTAAGTTCGAATGCAGCTCTCGGGCAAATCTGGAGGAGGC
ATGGTGCTGACGGCACAAAACATCATGAAACAAGAAGGCTTTGCAGATGC
CCACAACAGGTCCTGTTCCCCCCTCACCCCAACCTCCACATGTCCATGCC
ACGAGCGCCGCAGCAGCAAAGGTGGTGTTGCTCCCAACTCCTGTCACCTT
TGCCATCGCCATGGCAAGTGGTGTCTCTGGTTGGCTCTTTGTTCATCCTG
CAGACGTCGTCAAGGCCTGTACAGCGGGCTGTCCGCGGCCATTGCGCGTC
AGATGAGCTACACCACCTTGCGCCTGGGGTTCTTCGATGAGATCAAAGCC
CTTGTCGCTCAGCAACAGATCCAAGAAAGCGGCTTCACCCGCTCCATGTC
GGCCATGACGGCCGGTGCCTGCGCCTCATTCCTGGCCTGTCCTGTCGAAG
TCTGTCTTGTTAGAATGCAGGCCGACGGCAAACTGCCCAAGGCGGAGCAG
CGGGGCTACAAGCACGTAGGTGACGCCTTATTGCGCGTAGCAAAGGAGGA
GGGCGTACTCACCTATTGGCGAGGGGCAGGGCCGACCGTGTTACGGGCCA
TGGTGGTCTCCACCACCCAGCTAGGCACTTATGACCAGGCAAAGGTGACC
TTTCAAGAGGGAGGCATGCCCGACGGCACAGGCCTCCATTTGGCCTCGTC
CCTGACGGCAGGTTTGGTGTATTCCCTTGCCTCACTGCCTTTGGACACGG
CCAAGACGCGGATGCAGACTCAGGGGGCGCCGAGCACACAAGGAGGGCAG
TTGTTGTACAGGTCCACGGGGCAGACGCTCATGAAGATTGCGGCAGAGGA
AGGGGTGCGCGGGTTGTGGAAGGGCTTCGGTGCCTACTTCTTGCGAGGAG
GGGGGCATACGGTCTTCATGTTCTTGTTTTATGAGCAATACCGTGCTTTC
GCAAAGTCATTTTATGTGTAAGTTCGAATGCAGCTCTCGGGCAAATCTGG
AGGAGGCATGGTGCTGACGGCACAAAACATCATGAAACAAGAAGGCTTTG
CAGATGCCCACAACAGGTCCTGTTCCCCCCTCACCCCAACCTCCACATGT
CCATGCCACGAGCGCCGCAGCAGCAAAGGTGGTGTTGCTCCCAACTCCTG
TCACCTTTGCCATCGCCATGGCAAGTGGTGTCTCTGGTTGGCTCTTTGTT
CATCCTGCAGACGTCGTCAAG back to top
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