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Properties
| Property Name | Value |
|---|
| TranscriptId | 206170 |
| Track | FilteredModels2 |
| ProteinId | 206084 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_26 | supercontig | scaffold_26:39715..41613 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8502 ID=mRNA_8502|Name=jgi.p|Nanoce1779_2|206084|organism=Nannochloropsis oceanica|type=mRNA|length=1133bp
CGCAACTCTCATGTCCTATCACTTGACTTATTCCCCTTCCTCGTGGCATG
CTCACTCAACCATTGTTGCCCCGACTCTCCCCCGGCCAGACTTTCAACTC
AACTACAGTATTCTGATTAAGATGCCTCGCCTTGCCCTCGCTTCTTCCCT
CATCTCCCTCCTGATGTCGCTTAGCACCACCACCACCATGGCCTTCCTCG
TTCCTCGTCCTGCCTTCCTCCCCAGTCCTAGCGCCCTTATGGCTGGGCCT
CAGCAAGCAGATGGAGCCATCCGCGTCAAGAATATCCCGGAAAAGCGCGA
ATGGGTCCCCCTTATAAAGGCCAGTGAGATTGCCCCCGGAGACATGATCC
CCTTTGACACGAATGGTCTCTCCCTCCTCCTTGCCGCCGACAATGACGGC
ACTGTGTACTGCACGGCTGGGTGCAGCCCCTTTATGTCCGCCCCTCTTTC
CGACGGCCGCCTGCAAGACGGCTGTGTGATCTGTCCTCAGTCTGGCTCTG
CCTTCTCGCTGCAAACGGGAGAGCTGGTAGGGGAGTGGTGCCCTTTCCCT
CCCCTCCTCGGCCCCCTGATTGGAAAGCTTTATGAGGCTCGTGACCTGGC
CGTCTTCCCCGTCCGCGCCAAGGGAAATATGATCGAGGCGTATATCAATG
TCAACCTCAAGGCCGAGTTCGAGAGCAAGTACTGGGCTGGTCTCCTCGAC
GCACAGGGCAAGGCCACTGGCGACTACTACTAAGCATACCCATTCCATTC
CCTCGTCCTCCTTAGTGTTAAATTTGTTTCGATAACCCGGGGTGCTATGA
AAAGGAAAAAGAGAAGAAGATAACAGGATAGGAGGGAGGACGAAACATGT
GACCTCCCCCCTCCCGGGGAAAAAAAAAAAAAGAAGAGCAAGAACGACGA
TGACAATATTCATAAGCACGACGAGAATCTTAAAGTTATTTCCTACCACA
TTGATAAGTCGTCTTGTTTCAATCATCCGCATCATCTTCTTCATCGCCAC
CTTCTTCTTCTTCTTTTCCTTCTTTTTTTTCTACTATTAACTTCTGCTTC
GGCTCGTACTTCTTCTTCTTTCTCTCCCTCTTGCCCTACCATCCCTATTT
CCATCTTCCCCACCTACACTTCATAATAGCCTC back to topprotein sequence of jgi.p|Nanoce1779_2|206084 >mRNA_8502-protein ID=mRNA_8502-protein|Name=jgi.p|Nanoce1779_2|206084|organism=Nannochloropsis oceanica|type=polypeptide|length=241bp
MSYHLTYSPSSWHAHSTIVAPTLPRPDFQLNYSILIKMPRLALASSLISL
LMSLSTTTTMAFLVPRPAFLPSPSALMAGPQQADGAIRVKNIPEKREWVP
LIKASEIAPGDMIPFDTNGLSLLLAADNDGTVYCTAGCSPFMSAPLSDGR
LQDGCVICPQSGSAFSLQTGELVGEWCPFPPLLGPLIGKLYEARDLAVFP
VRAKGNMIEAYINVNLKAEFESKYWAGLLDAQGKATGDYY* back to topmRNA from alignment at scaffold_26:39715..41613- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8502 ID=mRNA_8502|Name=jgi.p|Nanoce1779_2|206084|organism=Nannochloropsis oceanica|type=mRNA|length=1899bp|location=Sequence derived from alignment at scaffold_26:39715..41613- (Nannochloropsis oceanica)
CGCAACTCTCATGTCCTATCACTTGACTTATTCCCCTTCCTCGTGGCATG
CTCACTCAACCATTGTTGCCCCGACTCTCCCCCGGCCAGACTTTCAACTC
AACTACAGTATTCTGATTAAGATGCCTCGCCTTGCCCTCGCTTCTTCCCT
CATCTCCCTCCTGATGTCGCTTAGCACCACCACCACCATGGCCTTCCTCG
TTCCTCGTCCTGCCTTCCTCCCCAGTCCTAGCGCCCTTATGGCTGGGCCT
CAGCAAGCAGATGGAGCCATCCGCGTCAAGAATATCCCGGAAAAGGTACA
GCATTTTTAGAATCTACATTGAAGCCCTCTCCTCTCCCTCCAATCTATCC
TCTTCTCTTTTCCGCTCCGCCTCCGTCCCACCGCAGACACTTCTTGCCCC
TGCCCACACCTCCCCTCCCTCCCACCCCTTCATTCCCCCCTTCTCACCGT
GTATCCTCAAGCGCGAATGGGTCCCCCTTATAAAGGCCAGTGAGATTGCC
CCCGGAGACATGATCCCCTTTGACACGAATGGTCTCTCCCTCCTCCTTGC
CGCCGACAATGACGGCACTGTGTACTGCACGGCTGGGTGCAGGTATGTGG
GGGGTTTCTGGTTTCCCCCTTCCTCCCTCCCTCTCTCCCTTTCTCCCTCC
CTCCCTTCCTCCCTTCACCTCTGCTTGTATCACGTCGATTCGTTTCCTTC
GTCCTCCAAAATCATTCATTCCTGCTTTATATCGTCACCTCTCCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTAGCCCCTTTATGT
CCGCCCCTCTTTCCGACGGCCGCCTGCAAGACGGCTGTGTGATCTGTCCT
CAGTCTGGCTCTGCCTTCTCGCTGCAAACGGGAGAGCTGGTAGGGGAGTG
GTGCCCTTTCCCTCCCCTCCTCGGCCCCCTGATTGGAAAGCTTTATGAGG
CTCGTGACCTGGCCGTCTTCCCCGTCCGCGCCAAGGGAAATATGATCGAG
GTAATGCGGGCGGGATGGGGGGAGGAAGGGTAGAGAAGGAGAAGGAGGGA
GGAGGGAGGGAAGGAGGGAGTGGAAAATGAGCCTTTGAGCCCTGGGAACA
AATGAAGAAATTCATCTCCACCCGGACACTCCGCCCCTTCCCTCCCTCCC
TCCCTCCCTCGCCTCCATGATAGGCGTATATCAATGTCAACCTCAAGGCC
GAGTTCGAGAGCAAGTACTGGTAAGTAGGGAGGAAGGAAGGAGGCGAGCA
AGGGAGGGGCAGTTTGAACACTTCCCCGACAGTTACAGACTCTTCTTCCG
AAACCGTCTTACGAGTAACGATCGTGCCTCCTCCCTCCCTCCCTCTGCTT
CCCAGGGCTGGTCTCCTCGACGCACAGGGCAAGGCCACTGGCGACTACTA
CTAAGCATACCCATTCCATCTGAGAGGGAGAGAGGGAGGGAGGGAGGGAG
GATCTCCTTCAGGACCCCTCGGGCCAAACCCTACCCTCCTTCCTTCCCTC
CCTCCCTCCCTCCCTCCCTCGTCCTCCTTAGTGTTAAATTTGTTTCGATA
ACCCGGGGTGCTATGAAAAGGAAAAAGAGAAGAAGATAACAGGATAGGAG
GGAGGACGAAACATGTGACCTCCCCCCTCCCGGGGAAAAAAAAAAAAAGA
AGAGCAAGAACGACGATGACAATATTCATAAGCACGACGAGAATCTTAAA
GTTATTTCCTACCACATTGATAAGTCGTCTTGTTTCAATCATCCGCATCA
TCTTCTTCATCGCCACCTTCTTCTTCTTCTTTTCCTTCTTTTTTTTCTAC
TATTAACTTCTGCTTCGGCTCGTACTTCTTCTTCTTTCTCTCCCTCTTGC
CCTACCATCCCTATTTCCATCTTCCCCACCTACACTTCATAATAGCCTC back to topCoding sequence (CDS) from alignment at scaffold_26:39715..41613- >mRNA_8502 ID=mRNA_8502|Name=jgi.p|Nanoce1779_2|206084|organism=Nannochloropsis oceanica|type=CDS|length=3615bp|location=Sequence derived from alignment at scaffold_26:39715..41613- (Nannochloropsis oceanica)
GGCTGGTCTCCTCGACGCACAGGGCAAGGCCACTGGCGACTACTACTAAG
CGTATATCAATGTCAACCTCAAGGCCGAGTTCGAGAGCAAGTACTGCCCC
TTTATGTCCGCCCCTCTTTCCGACGGCCGCCTGCAAGACGGCTGTGTGAT
CTGTCCTCAGTCTGGCTCTGCCTTCTCGCTGCAAACGGGAGAGCTGGTAG
GGGAGTGGTGCCCTTTCCCTCCCCTCCTCGGCCCCCTGATTGGAAAGCTT
TATGAGGCTCGTGACCTGGCCGTCTTCCCCGTCCGCGCCAAGGGAAATAT
GATCGAGCGCGAATGGGTCCCCCTTATAAAGGCCAGTGAGATTGCCCCCG
GAGACATGATCCCCTTTGACACGAATGGTCTCTCCCTCCTCCTTGCCGCC
GACAATGACGGCACTGTGTACTGCACGGCTGGGTGCAGATGTCCTATCAC
TTGACTTATTCCCCTTCCTCGTGGCATGCTCACTCAACCATTGTTGCCCC
GACTCTCCCCCGGCCAGACTTTCAACTCAACTACAGTATTCTGATTAAGA
TGCCTCGCCTTGCCCTCGCTTCTTCCCTCATCTCCCTCCTGATGTCGCTT
AGCACCACCACCACCATGGCCTTCCTCGTTCCTCGTCCTGCCTTCCTCCC
CAGTCCTAGCGCCCTTATGGCTGGGCCTCAGCAAGCAGATGGAGCCATCC
GCGTCAAGAATATCCCGGAAAAGGGCTGGTCTCCTCGACGCACAGGGCAA
GGCCACTGGCGACTACTACTAAGCGTATATCAATGTCAACCTCAAGGCCG
AGTTCGAGAGCAAGTACTGCCCCTTTATGTCCGCCCCTCTTTCCGACGGC
CGCCTGCAAGACGGCTGTGTGATCTGTCCTCAGTCTGGCTCTGCCTTCTC
GCTGCAAACGGGAGAGCTGGTAGGGGAGTGGTGCCCTTTCCCTCCCCTCC
TCGGCCCCCTGATTGGAAAGCTTTATGAGGCTCGTGACCTGGCCGTCTTC
CCCGTCCGCGCCAAGGGAAATATGATCGAGCGCGAATGGGTCCCCCTTAT
AAAGGCCAGTGAGATTGCCCCCGGAGACATGATCCCCTTTGACACGAATG
GTCTCTCCCTCCTCCTTGCCGCCGACAATGACGGCACTGTGTACTGCACG
GCTGGGTGCAGATGTCCTATCACTTGACTTATTCCCCTTCCTCGTGGCAT
GCTCACTCAACCATTGTTGCCCCGACTCTCCCCCGGCCAGACTTTCAACT
CAACTACAGTATTCTGATTAAGATGCCTCGCCTTGCCCTCGCTTCTTCCC
TCATCTCCCTCCTGATGTCGCTTAGCACCACCACCACCATGGCCTTCCTC
GTTCCTCGTCCTGCCTTCCTCCCCAGTCCTAGCGCCCTTATGGCTGGGCC
TCAGCAAGCAGATGGAGCCATCCGCGTCAAGAATATCCCGGAAAAGGGCT
GGTCTCCTCGACGCACAGGGCAAGGCCACTGGCGACTACTACTAAGCGTA
TATCAATGTCAACCTCAAGGCCGAGTTCGAGAGCAAGTACTGCCCCTTTA
TGTCCGCCCCTCTTTCCGACGGCCGCCTGCAAGACGGCTGTGTGATCTGT
CCTCAGTCTGGCTCTGCCTTCTCGCTGCAAACGGGAGAGCTGGTAGGGGA
GTGGTGCCCTTTCCCTCCCCTCCTCGGCCCCCTGATTGGAAAGCTTTATG
AGGCTCGTGACCTGGCCGTCTTCCCCGTCCGCGCCAAGGGAAATATGATC
GAGCGCGAATGGGTCCCCCTTATAAAGGCCAGTGAGATTGCCCCCGGAGA
CATGATCCCCTTTGACACGAATGGTCTCTCCCTCCTCCTTGCCGCCGACA
ATGACGGCACTGTGTACTGCACGGCTGGGTGCAGATGTCCTATCACTTGA
CTTATTCCCCTTCCTCGTGGCATGCTCACTCAACCATTGTTGCCCCGACT
CTCCCCCGGCCAGACTTTCAACTCAACTACAGTATTCTGATTAAGATGCC
TCGCCTTGCCCTCGCTTCTTCCCTCATCTCCCTCCTGATGTCGCTTAGCA
CCACCACCACCATGGCCTTCCTCGTTCCTCGTCCTGCCTTCCTCCCCAGT
CCTAGCGCCCTTATGGCTGGGCCTCAGCAAGCAGATGGAGCCATCCGCGT
CAAGAATATCCCGGAAAAGGGCTGGTCTCCTCGACGCACAGGGCAAGGCC
ACTGGCGACTACTACTAAGCGTATATCAATGTCAACCTCAAGGCCGAGTT
CGAGAGCAAGTACTGCCCCTTTATGTCCGCCCCTCTTTCCGACGGCCGCC
TGCAAGACGGCTGTGTGATCTGTCCTCAGTCTGGCTCTGCCTTCTCGCTG
CAAACGGGAGAGCTGGTAGGGGAGTGGTGCCCTTTCCCTCCCCTCCTCGG
CCCCCTGATTGGAAAGCTTTATGAGGCTCGTGACCTGGCCGTCTTCCCCG
TCCGCGCCAAGGGAAATATGATCGAGCGCGAATGGGTCCCCCTTATAAAG
GCCAGTGAGATTGCCCCCGGAGACATGATCCCCTTTGACACGAATGGTCT
CTCCCTCCTCCTTGCCGCCGACAATGACGGCACTGTGTACTGCACGGCTG
GGTGCAGATGTCCTATCACTTGACTTATTCCCCTTCCTCGTGGCATGCTC
ACTCAACCATTGTTGCCCCGACTCTCCCCCGGCCAGACTTTCAACTCAAC
TACAGTATTCTGATTAAGATGCCTCGCCTTGCCCTCGCTTCTTCCCTCAT
CTCCCTCCTGATGTCGCTTAGCACCACCACCACCATGGCCTTCCTCGTTC
CTCGTCCTGCCTTCCTCCCCAGTCCTAGCGCCCTTATGGCTGGGCCTCAG
CAAGCAGATGGAGCCATCCGCGTCAAGAATATCCCGGAAAAGGGCTGGTC
TCCTCGACGCACAGGGCAAGGCCACTGGCGACTACTACTAAGCGTATATC
AATGTCAACCTCAAGGCCGAGTTCGAGAGCAAGTACTGCCCCTTTATGTC
CGCCCCTCTTTCCGACGGCCGCCTGCAAGACGGCTGTGTGATCTGTCCTC
AGTCTGGCTCTGCCTTCTCGCTGCAAACGGGAGAGCTGGTAGGGGAGTGG
TGCCCTTTCCCTCCCCTCCTCGGCCCCCTGATTGGAAAGCTTTATGAGGC
TCGTGACCTGGCCGTCTTCCCCGTCCGCGCCAAGGGAAATATGATCGAGC
GCGAATGGGTCCCCCTTATAAAGGCCAGTGAGATTGCCCCCGGAGACATG
ATCCCCTTTGACACGAATGGTCTCTCCCTCCTCCTTGCCGCCGACAATGA
CGGCACTGTGTACTGCACGGCTGGGTGCAGATGTCCTATCACTTGACTTA
TTCCCCTTCCTCGTGGCATGCTCACTCAACCATTGTTGCCCCGACTCTCC
CCCGGCCAGACTTTCAACTCAACTACAGTATTCTGATTAAGATGCCTCGC
CTTGCCCTCGCTTCTTCCCTCATCTCCCTCCTGATGTCGCTTAGCACCAC
CACCACCATGGCCTTCCTCGTTCCTCGTCCTGCCTTCCTCCCCAGTCCTA
GCGCCCTTATGGCTGGGCCTCAGCAAGCAGATGGAGCCATCCGCGTCAAG
AATATCCCGGAAAAG back to top
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