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Properties
| Property Name | Value |
|---|
| TranscriptId | 641993 |
| Track | FilteredModels2 |
| ProteinId | 641907 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_26 | supercontig | scaffold_26:30127..31988 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8501 ID=mRNA_8501|Name=jgi.p|Nanoce1779_2|641907|organism=Nannochloropsis oceanica|type=mRNA|length=738bp
ATGGAACTGATTATTGAATTGATGTATTTGGAGCAAGGCAAGATGGGCAG
CGACGGCGGTTCCTCGGGGGCCCAGATTCGACAGATGGTCAATTTTATCC
TCCAGGAAGCGCACGAGAAGGCCAATGAGATCCGCATCAAGACCGAGCAC
GACTTCAACCTGGAGAAGCAGATGCTAGTCCACAACGCGACCGTGAAGAT
TAATGACGAGTACGCACAGAAGGAGAAGAACAAGGAGGTGGAGCAACGAA
TTGCCAAGTCCGCGGAGGTTGGCGGTGCCCGCGTTAAAAAGTTGAAGGCG
CGGGACGAACTCCTCGCCTCCCTCCGCACCGAGGCCATCGGCAAGGCGTC
CTCTATCGCTGCCTCCCCCTCCTACCCCGATATCCTCACAGCCCTCATCA
CTCAGGCGCTCATCAAGATCGAAGAGCGAGAGGTTGAAATCCGCGCCCGT
CCTAAGGACGTCAAAACCGTTACCAGCGTCATCCCTAAGGCTGTGGCAGC
CGCGCAAAAACTGCTGAAGGACAAGGAAATCGACGTGACATACACCCCCC
ATGTCACTTGCCCCACCTCCCCCGACAAGTGCCTGCCGGAAAACAGCGCG
GGCGGCATCCTAGCCACGGCCCTGGGCGGAAAGATCGTCGTCGACAACAC
CCTTGATAGTCGCCTGCGGTTGGGCTACGAGGAGCTGCAGCCTGAGATCC
GGGCCATGCTCTTCGGAGAGATAGGTGCCCCTAAATAG back to topprotein sequence of jgi.p|Nanoce1779_2|641907 >mRNA_8501-protein ID=mRNA_8501-protein|Name=jgi.p|Nanoce1779_2|641907|organism=Nannochloropsis oceanica|type=polypeptide|length=246bp
MELIIELMYLEQGKMGSDGGSSGAQIRQMVNFILQEAHEKANEIRIKTEH
DFNLEKQMLVHNATVKINDEYAQKEKNKEVEQRIAKSAEVGGARVKKLKA
RDELLASLRTEAIGKASSIAASPSYPDILTALITQALIKIEEREVEIRAR
PKDVKTVTSVIPKAVAAAQKLLKDKEIDVTYTPHVTCPTSPDKCLPENSA
GGILATALGGKIVVDNTLDSRLRLGYEELQPEIRAMLFGEIGAPK* back to topmRNA from alignment at scaffold_26:30127..31988- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8501 ID=mRNA_8501|Name=jgi.p|Nanoce1779_2|641907|organism=Nannochloropsis oceanica|type=mRNA|length=1862bp|location=Sequence derived from alignment at scaffold_26:30127..31988- (Nannochloropsis oceanica)
ATGGAACTGATTATTGAATTGATGTATTTGGAGGTGGGAGAGATAGGATT
AATGGGGTGTGTTGGACTAGCAATGACTGTGCTCCCTCCTTCCTCTGGGA
AATACAGAGATTCTCTGGACACCGCGAAACTGACCCTCCCTCCCTCCTTC
CTCCCTCCCTCCTCCCTCCGTAGACCTACCTACCTACCCACCCCTCGAGC
AAGGCAAGATGGGCAGCGACGGCGGTTCCTCGGGGGCCCAGATTCGACAG
ATGGTCAATTTTATCCTCCAGGAAGCGCACGAGAAGGCCAATGAGATCCG
CATCAAGGTATGATCGACGCCCTCTTTCCCTCCCTCCCTCCCCCGCCCTC
CCTCCCTCCCTGCTTCCTTCCCTCCCTCCATGGAATGTACGAGTTTTTGT
TGTTTTGTAATTGTCCCTCCCCCTCGCCCTCCCTCCCTCCCCTCCTCCCT
CCCCAGACCGAGCACGACTTCAACCTGGAGAAGCAGATGCTAGTCCACAA
CGCGACCGTGAAGATTAATGACGAGTACGCACAGAAGGAGAAGAACAAGG
AGGTGGAGCAACGAATGTACGTCCCTCCCTTCCTTCCCCTCGTGCATTGT
GGAGCCTTGGGAACAGGAAGTGAAATGCTCGTATCCCCACATCATTCATC
TCACGTCTCTCCCTCTCCCTCCCTCTCTAGTGCCAAGTCCGCGGAGGTTG
GCGGTGCCCGCGTTAAAAAGTTGAAGGTAAGCCCTCCCTCCCTCCCCCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCCCCCTGGCGCTCAC
CCCCACCATCCCTCCTTCCCTCCCTCCCCCCCCTTTCTCCCTCCCTCCCT
GCAGGCGCGGGACGAACTCCTCGCCTCCCTCCGCACCGAGGCCATCGGCA
AGGCGTCCTCTATCGCTGCCTCCCCCTCCTACCCCGATATCCTCACAGCC
CTCATCACTCAGGCGCTCATCAAGATCGAAGAGCGAGAGGTACGTCTTTC
CTCCCTCCCTCCCTCCCTCCCTCCCCCCCTCCGTCCCTCCGTCCCTCCTC
CTCACTAACCGTCCCCCTTCTCCTCCTCCATGACCGACCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCATTCCCTCAGGTTGAAATCCGCGCCCG
TCCTAAGGACGTCAAAACCGTTACCAGCGTCATCCCTAAGGCTGTGGCAG
CCGCGCAAAAACTGCTGAAGGACAAGGTACGTGCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTTCCCTCCTCATCGCATCCGCCTCCTCGAGCCCGTC
ATTTTGACACTTATTATTCCCATTCACTTCCCAACACTTCCCGTCCCTTG
CCCCCCTTCCTCCCTCGAAGGAAATCGACGTGACATACACCCCCCATGTC
ACTTGCCCCACCTCCCCCGACAAGTGCCTGCCGGAAAACAGGTGGGGAAG
GAGGGAGAGAGGGAGGGAGGGAGGGAGGGAGCTTTCTTCTCATTACCATT
CTATGTCCTGAGCCCGCTCATACCGACCTTTTCCTCCCTCCCGCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCTTTCTAGCGCGGGCGGCATCCTAGCCA
CGGCCCTGGGCGGAAAGATCGTCGTCGACAACACCCTTGATAGGTACGCC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCATCTTACCC
ACCCATATCTCCTCCTCTCCCCCCCAACACAATTCATATCCTTGTCCCTC
CCTCCCTCCCTCCCTCCCTTCCTTCCTCCCCAGTCGCCTGCGGTTGGGCT
ACGAGGAGCTGCAGCCTGAGATCCGGGCCATGCTCTTCGGAGAGATAGGT
GCCCCTAAATAG back to topCoding sequence (CDS) from alignment at scaffold_26:30127..31988- >mRNA_8501 ID=mRNA_8501|Name=jgi.p|Nanoce1779_2|641907|organism=Nannochloropsis oceanica|type=CDS|length=6642bp|location=Sequence derived from alignment at scaffold_26:30127..31988- (Nannochloropsis oceanica)
TCGCCTGCGGTTGGGCTACGAGGAGCTGCAGCCTGAGATCCGGGCCATGC
TCTTCGGAGAGATAGGTGCCCCTAAATAGCGCGGGCGGCATCCTAGCCAC
GGCCCTGGGCGGAAAGATCGTCGTCGACAACACCCTTGATAGGAAATCGA
CGTGACATACACCCCCCATGTCACTTGCCCCACCTCCCCCGACAAGTGCC
TGCCGGAAAACAGGTTGAAATCCGCGCCCGTCCTAAGGACGTCAAAACCG
TTACCAGCGTCATCCCTAAGGCTGTGGCAGCCGCGCAAAAACTGCTGAAG
GACAAGGCGCGGGACGAACTCCTCGCCTCCCTCCGCACCGAGGCCATCGG
CAAGGCGTCCTCTATCGCTGCCTCCCCCTCCTACCCCGATATCCTCACAG
CCCTCATCACTCAGGCGCTCATCAAGATCGAAGAGCGAGAGTGCCAAGTC
CGCGGAGGTTGGCGGTGCCCGCGTTAAAAAGTTGAAGACCGAGCACGACT
TCAACCTGGAGAAGCAGATGCTAGTCCACAACGCGACCGTGAAGATTAAT
GACGAGTACGCACAGAAGGAGAAGAACAAGGAGGTGGAGCAACGAATCAA
GGCAAGATGGGCAGCGACGGCGGTTCCTCGGGGGCCCAGATTCGACAGAT
GGTCAATTTTATCCTCCAGGAAGCGCACGAGAAGGCCAATGAGATCCGCA
TCAAGATGGAACTGATTATTGAATTGATGTATTTGGAGTCGCCTGCGGTT
GGGCTACGAGGAGCTGCAGCCTGAGATCCGGGCCATGCTCTTCGGAGAGA
TAGGTGCCCCTAAATAGCGCGGGCGGCATCCTAGCCACGGCCCTGGGCGG
AAAGATCGTCGTCGACAACACCCTTGATAGGAAATCGACGTGACATACAC
CCCCCATGTCACTTGCCCCACCTCCCCCGACAAGTGCCTGCCGGAAAACA
GGTTGAAATCCGCGCCCGTCCTAAGGACGTCAAAACCGTTACCAGCGTCA
TCCCTAAGGCTGTGGCAGCCGCGCAAAAACTGCTGAAGGACAAGGCGCGG
GACGAACTCCTCGCCTCCCTCCGCACCGAGGCCATCGGCAAGGCGTCCTC
TATCGCTGCCTCCCCCTCCTACCCCGATATCCTCACAGCCCTCATCACTC
AGGCGCTCATCAAGATCGAAGAGCGAGAGTGCCAAGTCCGCGGAGGTTGG
CGGTGCCCGCGTTAAAAAGTTGAAGACCGAGCACGACTTCAACCTGGAGA
AGCAGATGCTAGTCCACAACGCGACCGTGAAGATTAATGACGAGTACGCA
CAGAAGGAGAAGAACAAGGAGGTGGAGCAACGAATCAAGGCAAGATGGGC
AGCGACGGCGGTTCCTCGGGGGCCCAGATTCGACAGATGGTCAATTTTAT
CCTCCAGGAAGCGCACGAGAAGGCCAATGAGATCCGCATCAAGATGGAAC
TGATTATTGAATTGATGTATTTGGAGTCGCCTGCGGTTGGGCTACGAGGA
GCTGCAGCCTGAGATCCGGGCCATGCTCTTCGGAGAGATAGGTGCCCCTA
AATAGCGCGGGCGGCATCCTAGCCACGGCCCTGGGCGGAAAGATCGTCGT
CGACAACACCCTTGATAGGAAATCGACGTGACATACACCCCCCATGTCAC
TTGCCCCACCTCCCCCGACAAGTGCCTGCCGGAAAACAGGTTGAAATCCG
CGCCCGTCCTAAGGACGTCAAAACCGTTACCAGCGTCATCCCTAAGGCTG
TGGCAGCCGCGCAAAAACTGCTGAAGGACAAGGCGCGGGACGAACTCCTC
GCCTCCCTCCGCACCGAGGCCATCGGCAAGGCGTCCTCTATCGCTGCCTC
CCCCTCCTACCCCGATATCCTCACAGCCCTCATCACTCAGGCGCTCATCA
AGATCGAAGAGCGAGAGTGCCAAGTCCGCGGAGGTTGGCGGTGCCCGCGT
TAAAAAGTTGAAGACCGAGCACGACTTCAACCTGGAGAAGCAGATGCTAG
TCCACAACGCGACCGTGAAGATTAATGACGAGTACGCACAGAAGGAGAAG
AACAAGGAGGTGGAGCAACGAATCAAGGCAAGATGGGCAGCGACGGCGGT
TCCTCGGGGGCCCAGATTCGACAGATGGTCAATTTTATCCTCCAGGAAGC
GCACGAGAAGGCCAATGAGATCCGCATCAAGATGGAACTGATTATTGAAT
TGATGTATTTGGAGTCGCCTGCGGTTGGGCTACGAGGAGCTGCAGCCTGA
GATCCGGGCCATGCTCTTCGGAGAGATAGGTGCCCCTAAATAGCGCGGGC
GGCATCCTAGCCACGGCCCTGGGCGGAAAGATCGTCGTCGACAACACCCT
TGATAGGAAATCGACGTGACATACACCCCCCATGTCACTTGCCCCACCTC
CCCCGACAAGTGCCTGCCGGAAAACAGGTTGAAATCCGCGCCCGTCCTAA
GGACGTCAAAACCGTTACCAGCGTCATCCCTAAGGCTGTGGCAGCCGCGC
AAAAACTGCTGAAGGACAAGGCGCGGGACGAACTCCTCGCCTCCCTCCGC
ACCGAGGCCATCGGCAAGGCGTCCTCTATCGCTGCCTCCCCCTCCTACCC
CGATATCCTCACAGCCCTCATCACTCAGGCGCTCATCAAGATCGAAGAGC
GAGAGTGCCAAGTCCGCGGAGGTTGGCGGTGCCCGCGTTAAAAAGTTGAA
GACCGAGCACGACTTCAACCTGGAGAAGCAGATGCTAGTCCACAACGCGA
CCGTGAAGATTAATGACGAGTACGCACAGAAGGAGAAGAACAAGGAGGTG
GAGCAACGAATCAAGGCAAGATGGGCAGCGACGGCGGTTCCTCGGGGGCC
CAGATTCGACAGATGGTCAATTTTATCCTCCAGGAAGCGCACGAGAAGGC
CAATGAGATCCGCATCAAGATGGAACTGATTATTGAATTGATGTATTTGG
AGTCGCCTGCGGTTGGGCTACGAGGAGCTGCAGCCTGAGATCCGGGCCAT
GCTCTTCGGAGAGATAGGTGCCCCTAAATAGCGCGGGCGGCATCCTAGCC
ACGGCCCTGGGCGGAAAGATCGTCGTCGACAACACCCTTGATAGGAAATC
GACGTGACATACACCCCCCATGTCACTTGCCCCACCTCCCCCGACAAGTG
CCTGCCGGAAAACAGGTTGAAATCCGCGCCCGTCCTAAGGACGTCAAAAC
CGTTACCAGCGTCATCCCTAAGGCTGTGGCAGCCGCGCAAAAACTGCTGA
AGGACAAGGCGCGGGACGAACTCCTCGCCTCCCTCCGCACCGAGGCCATC
GGCAAGGCGTCCTCTATCGCTGCCTCCCCCTCCTACCCCGATATCCTCAC
AGCCCTCATCACTCAGGCGCTCATCAAGATCGAAGAGCGAGAGTGCCAAG
TCCGCGGAGGTTGGCGGTGCCCGCGTTAAAAAGTTGAAGACCGAGCACGA
CTTCAACCTGGAGAAGCAGATGCTAGTCCACAACGCGACCGTGAAGATTA
ATGACGAGTACGCACAGAAGGAGAAGAACAAGGAGGTGGAGCAACGAATC
AAGGCAAGATGGGCAGCGACGGCGGTTCCTCGGGGGCCCAGATTCGACAG
ATGGTCAATTTTATCCTCCAGGAAGCGCACGAGAAGGCCAATGAGATCCG
CATCAAGATGGAACTGATTATTGAATTGATGTATTTGGAGTCGCCTGCGG
TTGGGCTACGAGGAGCTGCAGCCTGAGATCCGGGCCATGCTCTTCGGAGA
GATAGGTGCCCCTAAATAGCGCGGGCGGCATCCTAGCCACGGCCCTGGGC
GGAAAGATCGTCGTCGACAACACCCTTGATAGGAAATCGACGTGACATAC
ACCCCCCATGTCACTTGCCCCACCTCCCCCGACAAGTGCCTGCCGGAAAA
CAGGTTGAAATCCGCGCCCGTCCTAAGGACGTCAAAACCGTTACCAGCGT
CATCCCTAAGGCTGTGGCAGCCGCGCAAAAACTGCTGAAGGACAAGGCGC
GGGACGAACTCCTCGCCTCCCTCCGCACCGAGGCCATCGGCAAGGCGTCC
TCTATCGCTGCCTCCCCCTCCTACCCCGATATCCTCACAGCCCTCATCAC
TCAGGCGCTCATCAAGATCGAAGAGCGAGAGTGCCAAGTCCGCGGAGGTT
GGCGGTGCCCGCGTTAAAAAGTTGAAGACCGAGCACGACTTCAACCTGGA
GAAGCAGATGCTAGTCCACAACGCGACCGTGAAGATTAATGACGAGTACG
CACAGAAGGAGAAGAACAAGGAGGTGGAGCAACGAATCAAGGCAAGATGG
GCAGCGACGGCGGTTCCTCGGGGGCCCAGATTCGACAGATGGTCAATTTT
ATCCTCCAGGAAGCGCACGAGAAGGCCAATGAGATCCGCATCAAGATGGA
ACTGATTATTGAATTGATGTATTTGGAGTCGCCTGCGGTTGGGCTACGAG
GAGCTGCAGCCTGAGATCCGGGCCATGCTCTTCGGAGAGATAGGTGCCCC
TAAATAGCGCGGGCGGCATCCTAGCCACGGCCCTGGGCGGAAAGATCGTC
GTCGACAACACCCTTGATAGGAAATCGACGTGACATACACCCCCCATGTC
ACTTGCCCCACCTCCCCCGACAAGTGCCTGCCGGAAAACAGGTTGAAATC
CGCGCCCGTCCTAAGGACGTCAAAACCGTTACCAGCGTCATCCCTAAGGC
TGTGGCAGCCGCGCAAAAACTGCTGAAGGACAAGGCGCGGGACGAACTCC
TCGCCTCCCTCCGCACCGAGGCCATCGGCAAGGCGTCCTCTATCGCTGCC
TCCCCCTCCTACCCCGATATCCTCACAGCCCTCATCACTCAGGCGCTCAT
CAAGATCGAAGAGCGAGAGTGCCAAGTCCGCGGAGGTTGGCGGTGCCCGC
GTTAAAAAGTTGAAGACCGAGCACGACTTCAACCTGGAGAAGCAGATGCT
AGTCCACAACGCGACCGTGAAGATTAATGACGAGTACGCACAGAAGGAGA
AGAACAAGGAGGTGGAGCAACGAATCAAGGCAAGATGGGCAGCGACGGCG
GTTCCTCGGGGGCCCAGATTCGACAGATGGTCAATTTTATCCTCCAGGAA
GCGCACGAGAAGGCCAATGAGATCCGCATCAAGATGGAACTGATTATTGA
ATTGATGTATTTGGAGTCGCCTGCGGTTGGGCTACGAGGAGCTGCAGCCT
GAGATCCGGGCCATGCTCTTCGGAGAGATAGGTGCCCCTAAATAGCGCGG
GCGGCATCCTAGCCACGGCCCTGGGCGGAAAGATCGTCGTCGACAACACC
CTTGATAGGAAATCGACGTGACATACACCCCCCATGTCACTTGCCCCACC
TCCCCCGACAAGTGCCTGCCGGAAAACAGGTTGAAATCCGCGCCCGTCCT
AAGGACGTCAAAACCGTTACCAGCGTCATCCCTAAGGCTGTGGCAGCCGC
GCAAAAACTGCTGAAGGACAAGGCGCGGGACGAACTCCTCGCCTCCCTCC
GCACCGAGGCCATCGGCAAGGCGTCCTCTATCGCTGCCTCCCCCTCCTAC
CCCGATATCCTCACAGCCCTCATCACTCAGGCGCTCATCAAGATCGAAGA
GCGAGAGTGCCAAGTCCGCGGAGGTTGGCGGTGCCCGCGTTAAAAAGTTG
AAGACCGAGCACGACTTCAACCTGGAGAAGCAGATGCTAGTCCACAACGC
GACCGTGAAGATTAATGACGAGTACGCACAGAAGGAGAAGAACAAGGAGG
TGGAGCAACGAATCAAGGCAAGATGGGCAGCGACGGCGGTTCCTCGGGGG
CCCAGATTCGACAGATGGTCAATTTTATCCTCCAGGAAGCGCACGAGAAG
GCCAATGAGATCCGCATCAAGATGGAACTGATTATTGAATTGATGTATTT
GGAGTCGCCTGCGGTTGGGCTACGAGGAGCTGCAGCCTGAGATCCGGGCC
ATGCTCTTCGGAGAGATAGGTGCCCCTAAATAGCGCGGGCGGCATCCTAG
CCACGGCCCTGGGCGGAAAGATCGTCGTCGACAACACCCTTGATAGGAAA
TCGACGTGACATACACCCCCCATGTCACTTGCCCCACCTCCCCCGACAAG
TGCCTGCCGGAAAACAGGTTGAAATCCGCGCCCGTCCTAAGGACGTCAAA
ACCGTTACCAGCGTCATCCCTAAGGCTGTGGCAGCCGCGCAAAAACTGCT
GAAGGACAAGGCGCGGGACGAACTCCTCGCCTCCCTCCGCACCGAGGCCA
TCGGCAAGGCGTCCTCTATCGCTGCCTCCCCCTCCTACCCCGATATCCTC
ACAGCCCTCATCACTCAGGCGCTCATCAAGATCGAAGAGCGAGAGTGCCA
AGTCCGCGGAGGTTGGCGGTGCCCGCGTTAAAAAGTTGAAGACCGAGCAC
GACTTCAACCTGGAGAAGCAGATGCTAGTCCACAACGCGACCGTGAAGAT
TAATGACGAGTACGCACAGAAGGAGAAGAACAAGGAGGTGGAGCAACGAA
TCAAGGCAAGATGGGCAGCGACGGCGGTTCCTCGGGGGCCCAGATTCGAC
AGATGGTCAATTTTATCCTCCAGGAAGCGCACGAGAAGGCCAATGAGATC
CGCATCAAGATGGAACTGATTATTGAATTGATGTATTTGGAG back to top
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