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Properties
| Property Name | Value |
|---|
| TranscriptId | 574436 |
| Track | FilteredModels2 |
| ProteinId | 574350 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:579939..581782 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_850 ID=mRNA_850|Name=jgi.p|Nanoce1779_2|574350|organism=Nannochloropsis oceanica|type=mRNA|length=1035bp
ACAGGCTCCACTGATACCACCACTCTCACGCGGTCTCGGCACCCACATCA
TCGATCAACCATATCTAATATGGATGCAGAGCTCGAGACTTTGCTTGCAG
TCCTCAACGACATTCAGAAAGCAGTGGGAGGCAAGGTCGTGAAGAAGGCC
AAAGAGGGCGGCAAGGTGGATAAGTTCATGGACGTCAAGCAGACCATGAT
CGCACGCATTGTGGAGGTACGAAAGCTCATAGCCACGACCAGGAATCAGA
CGCCGGGTCAAGAACTGCAACCCAAGGAAGTCATCGCCTCCAATGCCCAA
GTCCGAGAGTACCTGCGGCAGTTGAACGAGGACTACAAGGAATTGGAACG
ATTGTTTTCGAAGGAAAAGAACAAGCGGAAGAGCAAATTTGCACCGGAAG
AGCTGGAGGTGCGGGGGCAGGTGGTAAATCAGATGCTGAGGGAGGTACAA
GAATTGAAGGAGGTCTCTCTGGCCGGCTATATTCGGAAAGGCAATGTCAC
TGGGAATAACATGGCAGGCCTGATCGTGCCGATGGAGGAGTCGGAGGCGT
TCCAAGGGCCGATGGGCGCGATGCCCATGAACACAGGCATGACCGAAGAC
CACCGTGTGCAGTTGCAACAGATCCAACAGCGTGATAAGGATATGGACAG
ACATTACCTCGATCAGATCGAGAGGGGCGTGGAGGACTTGAGAGATATAG
CGCTGAGGGCGAATGAGGGGGTTCGAACGACCAACGTGATGCTCGAAAAC
CTCGAGCAAAAAATCATCGATGTCCAGGATCACCTCGATCGCGTGAACAA
AAAGATGAAGACGACCCTGCAGCAGGTTGGGCGACGGTCAGATAAGCTGT
GCATCGACATCATTTGTATTGTAATTCTGCTGGGGATGATTGGCTTGTTG
TATAACCTGATGAAGAACAGTAAGAATTCTTGAGAATGAGCTGCAGCGGT
AGGAGCAGCAGATGTGGGATTTTGGAGTGGGGAGGGGGTGTGGGTTTGGT
TATCATGCAAAGAGGGAGGGGAGGAGGACGATAGT back to topprotein sequence of jgi.p|Nanoce1779_2|574350 >mRNA_850-protein ID=mRNA_850-protein|Name=jgi.p|Nanoce1779_2|574350|organism=Nannochloropsis oceanica|type=polypeptide|length=288bp
MDAELETLLAVLNDIQKAVGGKVVKKAKEGGKVDKFMDVKQTMIARIVEV
RKLIATTRNQTPGQELQPKEVIASNAQVREYLRQLNEDYKELERLFSKEK
NKRKSKFAPEELEVRGQVVNQMLREVQELKEVSLAGYIRKGNVTGNNMAG
LIVPMEESEAFQGPMGAMPMNTGMTEDHRVQLQQIQQRDKDMDRHYLDQI
ERGVEDLRDIALRANEGVRTTNVMLENLEQKIIDVQDHLDRVNKKMKTTL
QQVGRRSDKLCIDIICIVILLGMIGLLYNLMKNSKNS* back to topmRNA from alignment at scaffold_2:579939..581782- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_850 ID=mRNA_850|Name=jgi.p|Nanoce1779_2|574350|organism=Nannochloropsis oceanica|type=mRNA|length=1844bp|location=Sequence derived from alignment at scaffold_2:579939..581782- (Nannochloropsis oceanica)
ACAGGCTCCACTGATACCACCACTCTCACGCGGTCTCGGCACCCACATCA
TCGATCAACCATATCTAATATGGATGCAGAGCTCGAGACTTTGCTTGCAG
TCCTCAACGACATTCAGGTACGATGTCCCGTAGTTTGGCAAAAAGCACAG
GGCTCTAAAAGTGCTCCTACATCCTTCGTTTGCTCTTGCCCCTTGTACGC
CTGCTCACATCAAACCACATTCCCACCAATTACAGAAAGCAGTGGGAGGC
AAGGTCGTGAAGAAGGCCAAAGAGGGCGGCAAGGTGGATAAGTTCATGGA
CGTCAAGCAGACCATGATCGGTGCGTTTGACTGGAAAAGCCGGGAGGAAG
AGAGCGAGAAGGAAGAGAAGGGGGGGGAATGAAATTGTTTTATAAAAGGG
AAGGAGGCGGGGGGGGGGGTTACGTATGGATAGGATGGTAGCACATGCGG
AACTTTTTGTTTGCTGCTTACACAAAGTGCGCGGGCTCTCCCTAAAAAAT
AAAGTCAGATGGGCAGTGCTAAAGCACTGCTTCCTCTCTCAAAATTATGC
CATCAAATGTAATACCCGCTCATTCCTCCAGCAACTCCCCATAACCCTTA
TCACAGCACGCATTGTGGAGGTACGAAAGCTCATAGCCACGACCAGGAAT
CAGACGCCGGGTCAAGAACTGCAACCCAAGGAAGTCATCGCCTCCAATGC
CCAAGTCCGAGAGTACCTGCGGCAGTTGAACGAGGACTACAAGGAATTGG
AACGATTGTTTTCGAAGGAAAAGAACAAGCGGAAGGTAAGGGGAAGCAAA
GGGAGGAGGAGAGATGACTGTGGTGGTGACAATCTGAGAGACTGCTTCTG
TGCAGGTATTGAGTGACGTGGAAGCACACGCGATAGAGCTCTCACTCTGG
CTTTGCGTCCTTAATTTGCTTGCATATACAGAGCAAATTTGCACCGGAAG
AGCTGGAGGTGCGGGGGCAGGTGGTAAATCAGATGCTGAGGGAGGTACAA
GAATTGAAGGAGGTCTCTCTGGCCGGCTATATTCGGAAAGGCAATGTCAC
TGGGAATAACATGGCAGGCCTGATCGTGCCGATGGAGGAGTCGGAGGCGT
TCCAAGGGCCGATGGGTACGTTAATTTTCTCTGCTTTGGATTGCCGTAAT
CCACGTCTCTATGAAGCTGCGTCTTTCTTGCATTGGTTCCCTCAACGGGC
AACTCTCGAATGTCAATTAGCTCGTTTTCGTCCCCCCTCCCTCCTACCTT
CTCTCCCTACGTAGGCGCGATGCCCATGAACACAGGCATGACCGAAGACC
ACCGTGTGCAGTTGCAACAGATCCAACAGCGTGATAAGGATATGGACAGA
CATTACCTCGATCAGATCGAGAGGGGCGTGGAGGACTTGAGAGATATAGC
GCTGAGGGCGAATGAGGTGAGGGATGGGGGGGGGTAGGGTTGGAAGGGAA
GGAAGGAAAGTATACCATAATTGAAATACCCATTTCTCCCTCCCCCCCTC
CCTCCCTCTCTGCATGCTTATCTTAGGGGGTTCGAACGACCAACGTGATG
CTCGAAAACCTCGAGCAAAAAATCATCGATGTCCAGGATCACCTCGATCG
CGTGAACAAAAAGATGAAGACGACCCTGCAGCAGGTTGGGCGACGGTCAG
ATAAGCTGTGCATCGACATCATTTGTATTGTAATTCTGCTGGGGATGATT
GGCTTGTTGTATAACCTGATGAAGAACAGTAAGAATTCTTGAGAATGAGC
TGCAGCGGTAGGAGCAGCAGATGTGGGATTTTGGAGTGGGGAGGGGGTGT
GGGTTTGGTTATCATGCAAAGAGGGAGGGGAGGAGGACGATAGT back to topCoding sequence (CDS) from alignment at scaffold_2:579939..581782- >mRNA_850 ID=mRNA_850|Name=jgi.p|Nanoce1779_2|574350|organism=Nannochloropsis oceanica|type=CDS|length=5184bp|location=Sequence derived from alignment at scaffold_2:579939..581782- (Nannochloropsis oceanica)
GGGGTTCGAACGACCAACGTGATGCTCGAAAACCTCGAGCAAAAAATCAT
CGATGTCCAGGATCACCTCGATCGCGTGAACAAAAAGATGAAGACGACCC
TGCAGCAGGTTGGGCGACGGTCAGATAAGCTGTGCATCGACATCATTTGT
ATTGTAATTCTGCTGGGGATGATTGGCTTGTTGTATAACCTGATGAAGAA
CAGTAAGAATTCTTGAGCGCGATGCCCATGAACACAGGCATGACCGAAGA
CCACCGTGTGCAGTTGCAACAGATCCAACAGCGTGATAAGGATATGGACA
GACATTACCTCGATCAGATCGAGAGGGGCGTGGAGGACTTGAGAGATATA
GCGCTGAGGGCGAATGAGAGCAAATTTGCACCGGAAGAGCTGGAGGTGCG
GGGGCAGGTGGTAAATCAGATGCTGAGGGAGGTACAAGAATTGAAGGAGG
TCTCTCTGGCCGGCTATATTCGGAAAGGCAATGTCACTGGGAATAACATG
GCAGGCCTGATCGTGCCGATGGAGGAGTCGGAGGCGTTCCAAGGGCCGAT
GGCACGCATTGTGGAGGTACGAAAGCTCATAGCCACGACCAGGAATCAGA
CGCCGGGTCAAGAACTGCAACCCAAGGAAGTCATCGCCTCCAATGCCCAA
GTCCGAGAGTACCTGCGGCAGTTGAACGAGGACTACAAGGAATTGGAACG
ATTGTTTTCGAAGGAAAAGAACAAGCGGAAGAAAGCAGTGGGAGGCAAGG
TCGTGAAGAAGGCCAAAGAGGGCGGCAAGGTGGATAAGTTCATGGACGTC
AAGCAGACCATGATCGATGGATGCAGAGCTCGAGACTTTGCTTGCAGTCC
TCAACGACATTCAGGGGGTTCGAACGACCAACGTGATGCTCGAAAACCTC
GAGCAAAAAATCATCGATGTCCAGGATCACCTCGATCGCGTGAACAAAAA
GATGAAGACGACCCTGCAGCAGGTTGGGCGACGGTCAGATAAGCTGTGCA
TCGACATCATTTGTATTGTAATTCTGCTGGGGATGATTGGCTTGTTGTAT
AACCTGATGAAGAACAGTAAGAATTCTTGAGCGCGATGCCCATGAACACA
GGCATGACCGAAGACCACCGTGTGCAGTTGCAACAGATCCAACAGCGTGA
TAAGGATATGGACAGACATTACCTCGATCAGATCGAGAGGGGCGTGGAGG
ACTTGAGAGATATAGCGCTGAGGGCGAATGAGAGCAAATTTGCACCGGAA
GAGCTGGAGGTGCGGGGGCAGGTGGTAAATCAGATGCTGAGGGAGGTACA
AGAATTGAAGGAGGTCTCTCTGGCCGGCTATATTCGGAAAGGCAATGTCA
CTGGGAATAACATGGCAGGCCTGATCGTGCCGATGGAGGAGTCGGAGGCG
TTCCAAGGGCCGATGGCACGCATTGTGGAGGTACGAAAGCTCATAGCCAC
GACCAGGAATCAGACGCCGGGTCAAGAACTGCAACCCAAGGAAGTCATCG
CCTCCAATGCCCAAGTCCGAGAGTACCTGCGGCAGTTGAACGAGGACTAC
AAGGAATTGGAACGATTGTTTTCGAAGGAAAAGAACAAGCGGAAGAAAGC
AGTGGGAGGCAAGGTCGTGAAGAAGGCCAAAGAGGGCGGCAAGGTGGATA
AGTTCATGGACGTCAAGCAGACCATGATCGATGGATGCAGAGCTCGAGAC
TTTGCTTGCAGTCCTCAACGACATTCAGGGGGTTCGAACGACCAACGTGA
TGCTCGAAAACCTCGAGCAAAAAATCATCGATGTCCAGGATCACCTCGAT
CGCGTGAACAAAAAGATGAAGACGACCCTGCAGCAGGTTGGGCGACGGTC
AGATAAGCTGTGCATCGACATCATTTGTATTGTAATTCTGCTGGGGATGA
TTGGCTTGTTGTATAACCTGATGAAGAACAGTAAGAATTCTTGAGCGCGA
TGCCCATGAACACAGGCATGACCGAAGACCACCGTGTGCAGTTGCAACAG
ATCCAACAGCGTGATAAGGATATGGACAGACATTACCTCGATCAGATCGA
GAGGGGCGTGGAGGACTTGAGAGATATAGCGCTGAGGGCGAATGAGAGCA
AATTTGCACCGGAAGAGCTGGAGGTGCGGGGGCAGGTGGTAAATCAGATG
CTGAGGGAGGTACAAGAATTGAAGGAGGTCTCTCTGGCCGGCTATATTCG
GAAAGGCAATGTCACTGGGAATAACATGGCAGGCCTGATCGTGCCGATGG
AGGAGTCGGAGGCGTTCCAAGGGCCGATGGCACGCATTGTGGAGGTACGA
AAGCTCATAGCCACGACCAGGAATCAGACGCCGGGTCAAGAACTGCAACC
CAAGGAAGTCATCGCCTCCAATGCCCAAGTCCGAGAGTACCTGCGGCAGT
TGAACGAGGACTACAAGGAATTGGAACGATTGTTTTCGAAGGAAAAGAAC
AAGCGGAAGAAAGCAGTGGGAGGCAAGGTCGTGAAGAAGGCCAAAGAGGG
CGGCAAGGTGGATAAGTTCATGGACGTCAAGCAGACCATGATCGATGGAT
GCAGAGCTCGAGACTTTGCTTGCAGTCCTCAACGACATTCAGGGGGTTCG
AACGACCAACGTGATGCTCGAAAACCTCGAGCAAAAAATCATCGATGTCC
AGGATCACCTCGATCGCGTGAACAAAAAGATGAAGACGACCCTGCAGCAG
GTTGGGCGACGGTCAGATAAGCTGTGCATCGACATCATTTGTATTGTAAT
TCTGCTGGGGATGATTGGCTTGTTGTATAACCTGATGAAGAACAGTAAGA
ATTCTTGAGCGCGATGCCCATGAACACAGGCATGACCGAAGACCACCGTG
TGCAGTTGCAACAGATCCAACAGCGTGATAAGGATATGGACAGACATTAC
CTCGATCAGATCGAGAGGGGCGTGGAGGACTTGAGAGATATAGCGCTGAG
GGCGAATGAGAGCAAATTTGCACCGGAAGAGCTGGAGGTGCGGGGGCAGG
TGGTAAATCAGATGCTGAGGGAGGTACAAGAATTGAAGGAGGTCTCTCTG
GCCGGCTATATTCGGAAAGGCAATGTCACTGGGAATAACATGGCAGGCCT
GATCGTGCCGATGGAGGAGTCGGAGGCGTTCCAAGGGCCGATGGCACGCA
TTGTGGAGGTACGAAAGCTCATAGCCACGACCAGGAATCAGACGCCGGGT
CAAGAACTGCAACCCAAGGAAGTCATCGCCTCCAATGCCCAAGTCCGAGA
GTACCTGCGGCAGTTGAACGAGGACTACAAGGAATTGGAACGATTGTTTT
CGAAGGAAAAGAACAAGCGGAAGAAAGCAGTGGGAGGCAAGGTCGTGAAG
AAGGCCAAAGAGGGCGGCAAGGTGGATAAGTTCATGGACGTCAAGCAGAC
CATGATCGATGGATGCAGAGCTCGAGACTTTGCTTGCAGTCCTCAACGAC
ATTCAGGGGGTTCGAACGACCAACGTGATGCTCGAAAACCTCGAGCAAAA
AATCATCGATGTCCAGGATCACCTCGATCGCGTGAACAAAAAGATGAAGA
CGACCCTGCAGCAGGTTGGGCGACGGTCAGATAAGCTGTGCATCGACATC
ATTTGTATTGTAATTCTGCTGGGGATGATTGGCTTGTTGTATAACCTGAT
GAAGAACAGTAAGAATTCTTGAGCGCGATGCCCATGAACACAGGCATGAC
CGAAGACCACCGTGTGCAGTTGCAACAGATCCAACAGCGTGATAAGGATA
TGGACAGACATTACCTCGATCAGATCGAGAGGGGCGTGGAGGACTTGAGA
GATATAGCGCTGAGGGCGAATGAGAGCAAATTTGCACCGGAAGAGCTGGA
GGTGCGGGGGCAGGTGGTAAATCAGATGCTGAGGGAGGTACAAGAATTGA
AGGAGGTCTCTCTGGCCGGCTATATTCGGAAAGGCAATGTCACTGGGAAT
AACATGGCAGGCCTGATCGTGCCGATGGAGGAGTCGGAGGCGTTCCAAGG
GCCGATGGCACGCATTGTGGAGGTACGAAAGCTCATAGCCACGACCAGGA
ATCAGACGCCGGGTCAAGAACTGCAACCCAAGGAAGTCATCGCCTCCAAT
GCCCAAGTCCGAGAGTACCTGCGGCAGTTGAACGAGGACTACAAGGAATT
GGAACGATTGTTTTCGAAGGAAAAGAACAAGCGGAAGAAAGCAGTGGGAG
GCAAGGTCGTGAAGAAGGCCAAAGAGGGCGGCAAGGTGGATAAGTTCATG
GACGTCAAGCAGACCATGATCGATGGATGCAGAGCTCGAGACTTTGCTTG
CAGTCCTCAACGACATTCAGGGGGTTCGAACGACCAACGTGATGCTCGAA
AACCTCGAGCAAAAAATCATCGATGTCCAGGATCACCTCGATCGCGTGAA
CAAAAAGATGAAGACGACCCTGCAGCAGGTTGGGCGACGGTCAGATAAGC
TGTGCATCGACATCATTTGTATTGTAATTCTGCTGGGGATGATTGGCTTG
TTGTATAACCTGATGAAGAACAGTAAGAATTCTTGAGCGCGATGCCCATG
AACACAGGCATGACCGAAGACCACCGTGTGCAGTTGCAACAGATCCAACA
GCGTGATAAGGATATGGACAGACATTACCTCGATCAGATCGAGAGGGGCG
TGGAGGACTTGAGAGATATAGCGCTGAGGGCGAATGAGAGCAAATTTGCA
CCGGAAGAGCTGGAGGTGCGGGGGCAGGTGGTAAATCAGATGCTGAGGGA
GGTACAAGAATTGAAGGAGGTCTCTCTGGCCGGCTATATTCGGAAAGGCA
ATGTCACTGGGAATAACATGGCAGGCCTGATCGTGCCGATGGAGGAGTCG
GAGGCGTTCCAAGGGCCGATGGCACGCATTGTGGAGGTACGAAAGCTCAT
AGCCACGACCAGGAATCAGACGCCGGGTCAAGAACTGCAACCCAAGGAAG
TCATCGCCTCCAATGCCCAAGTCCGAGAGTACCTGCGGCAGTTGAACGAG
GACTACAAGGAATTGGAACGATTGTTTTCGAAGGAAAAGAACAAGCGGAA
GAAAGCAGTGGGAGGCAAGGTCGTGAAGAAGGCCAAAGAGGGCGGCAAGG
TGGATAAGTTCATGGACGTCAAGCAGACCATGATCGATGGATGCAGAGCT
CGAGACTTTGCTTGCAGTCCTCAACGACATTCAG back to top
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