|
|
Properties
| Property Name | Value |
|---|
| TranscriptId | 206271 |
| Track | FilteredModels2 |
| ProteinId | 206185 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_26 | supercontig | scaffold_26:24016..25988 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8498 ID=mRNA_8498|Name=jgi.p|Nanoce1779_2|206185|organism=Nannochloropsis oceanica|type=mRNA|length=947bp
CGGCGGCAGCAGCAGCACCAGCAGCACCAGCACCAGCCGCAGCAAGAATA
GCGTCTGACATCCACATTCAGCAGCAGTACGGACCACAGAAAAATGACAA
ACGAAAAGCGCGGCGTTTCGTTGCCATGGTTTTTTTTAGCGTGCCTTGGC
TCTATCGGCGGCATCATCTTCCTAGCTCTGGCAGAGGGGAGTAACGAATG
GCTCGTCGCTCGCGTAAAAGATCCGCAGCTCCCACAAAAACTAACTGTTG
GTCTCTACACTGGCTATCAGCGACTGGGCAACGTCCCACCGTCCCTCTTC
GATCCTGCCTGGTGTGGCGCCGACGACAACCACTTGTCGGCCTCCCTCCC
CTCCACGCCGTGGTGCTCCTCCGTCACTGCTGTCAAGGCCCTCACCCTCA
CTGGCCTCCTCCTGCCAAAGCCCCTCCAGATCGCCTTTGCTCTAGTTACT
CTCCTCGGCACCATTGCTTGCGCCGTCTCTGCTTACTTCTGGATGGACGT
GCAGCACGGGTTTTGTCCCTCCCTCGCCCCCTCTTTCCGCACCGTCGACA
CTGCCTTCACTTGTCGCCCCAGTCGGGATTTTTTCTTCCTCTGTCTGGCT
GGCCTCCTCTTCCTTCTGGCCTCCTTCTCCTCCTTCTTCACTGCCCGCCT
TCCTGCCCCCTCACCGTCGGCCCTGGCGGTGTCGGGGAACGGAAGATGCT
ACATGTACAATGAGGGAAGGTGTGTGCTGTCGCTGCGCAGGGAGGGAGGG
AAGGAGGGAAGGAGGGAGAGCGGGAGGGAGCATAAGCTGCAACAGGGGAC
AATCGGGCAGGATAGTCATAGCAGTAGCAGTAGCAGTGAGGGAAAATGCA
ATGACCAGCAACCAACAGACACTTAGAAAAAGAAGAAAAGAGGAAAGAAG
GTCAATCTCAATAAAGGCATGTTCGCGTTGCATATATTGTGGTGTAG back to topprotein sequence of jgi.p|Nanoce1779_2|206185 >mRNA_8498-protein ID=mRNA_8498-protein|Name=jgi.p|Nanoce1779_2|206185|organism=Nannochloropsis oceanica|type=polypeptide|length=261bp
MTNEKRGVSLPWFFLACLGSIGGIIFLALAEGSNEWLVARVKDPQLPQKL
TVGLYTGYQRLGNVPPSLFDPAWCGADDNHLSASLPSTPWCSSVTAVKAL
TLTGLLLPKPLQIAFALVTLLGTIACAVSAYFWMDVQHGFCPSLAPSFRT
VDTAFTCRPSRDFFFLCLAGLLFLLASFSSFFTARLPAPSPSALAVSGNG
RCYMYNEGRCVLSLRREGGKEGRRESGREHKLQQGTIGQDSHSSSSSSEG
KCNDQQPTDT* back to topmRNA from alignment at scaffold_26:24016..25988- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8498 ID=mRNA_8498|Name=jgi.p|Nanoce1779_2|206185|organism=Nannochloropsis oceanica|type=mRNA|length=1973bp|location=Sequence derived from alignment at scaffold_26:24016..25988- (Nannochloropsis oceanica)
CGGCGGCAGCAGCAGCACCAGCAGCACCAGCACCAGCCGCAGCAAGAATA
GCGTCTGACATCCACATTCAGCAGCAGTACGGACCACAGAAAAATGACAA
ACGAAAAGGTACGTCCTAAACTCTTCTCTCTCTCCCTCCGTCCCTCCGTC
TCTCCGTCCCTCCCTCCTTCTACCCCTCTCTCCGTCATTCCCTCACCTCC
CTCGCCAGCCGAGCCTCTCAATCTTCCCTCCTACTATCGTCCTCCTACCA
ATCTTTAATTTTCCCCAATAAGTATTCATGATTTATAAACCCACGTTCTC
ACATACGTCCCCTCCCTTCCTCCCTCCCTCCTTCCCTCCCTCTCAAGCGC
GGCGTTTCGTTGCCATGGTTTTTTTTAGCGTGCCTTGGCTCTATCGGCGG
CATCATCTTCCTAGCTCTGGCAGAGGGGAGTAACGGTGAGAAGATGAGGG
AGGGAAGGAGGGAAAGGATGAAGCTAGACGCAGCATGACCTGGACCTACG
CAGCAAGAGTGATGACTCACTTCCCTTCCCTCCCTCCTTCCCTCCCTCCC
TCCCTCTTTCCTATCCAGAATGGCTCGTCGCTCGCGTAAAAGATCCGCAG
CTCCCACAAAAACTAACTGTTGGTCTCTACACTGGCTATCAGGTAGGGAG
GGAGATAGGGAAGGAGGGAGGGAAGGAGGTGCGAGCCATCAGTTGAACGT
TCGTTTCCATTAGAGTCTGACCACCCGCCCTTCCTCCCTCCCTCCCTCCC
TCCTTTCAGCGACTGGGCAACGTCCCACCGTCCCTCTTCGATCCTGCCTG
GTGTGGCGCCGACGACAACCACTTGTCGGCCTCCCTCCCCTCCACGCCGT
GGTGCTCCTCCGTCACTGCTGTCAAGGCCCTCACCCTCACTGGCCTCCTC
CTGGTGGGCTTCGCCCTCTTTCCCTACCTCTGGTTTCTCGGAACTCCCGT
GCGTTCCCCACCCGCCCTCTCTTCCTCCCTCCCTTCCTTCCTCCCTCCCT
CCCTCCAATCCAACGTGTCGTTTCACGCACCGTGGACGTGCAATCTCTCC
CTCCTTCCTCCTCCTTATCCTCCCTTCTTCTCATCCTTCCTCCTTCTCTC
CCTCAGCCAAAGCCCCTCCAGATCGCCTTTGCTCTAGTTACTCTCCTCGG
CACCATTGCTTGCGCCGTCTCTGCTTACTTCTGGATGGACGTGCAGGTAC
CCCTCCGTCCGTCCGTCCCTCCCTCCCTCCCTCCCTCCCTCTTTCCTTCC
CTCCCTCCCTTCGCCCTTCTCTATCTGGTATACCGAGCACTACCCCACCC
ACCCACCCCTCCTTCCCTCCCCCTCCTTCCCTCCCTGGACAGCACGGGTT
TTGTCCCTCCCTCGCCCCCTCTTTCCGCACCGTCGACACTGCCTTCACTT
GTCGCCCCAGTCGGGATTTTTTCTTCCTCTGTCTGGCTGGCCTCCTCTTC
CTTCTGGCCTCCTTCTCCTCCTTCTTCACTGCCCGCCTTCCTGCCCCCTC
ACCGTCGGCCCTGGCGGTGTCGGGGAACGCGAAGATGATCAATGAGGAGG
AGGGGGAGGGCGGGGGGGGGAAGGGCTCGAATGACCCGCTGCCGGTGGCG
GTGGTGGAGGGAGGGGAGGAAAATGGAAGGCATGTATGAGGGAGGAAAGG
AGGGAGGGAGGGAAGGAGGGGGGGAGGGAAGGAGGGGGGGAGGGAAGGAG
GGGGGGAGGGGAGGAGGGAAGATGCTACATGTACAATGAGGGAAGGTGTG
TGCTGTCGCTGCGCAGGGAGGGAGGGAAGGAGGGAAGGAGGGAGAGCGGG
AGGGAGCATAAGCTGCAACAGGGGACAATCGGGCAGGATAGTCATAGCAG
TAGCAGTAGCAGTGAGGGAAAATGCAATGACCAGCAACCAACAGACACTT
AGAAAAAGAAGAAAAGAGGAAAGAAGGTCAATCTCAATAAAGGCATGTTC
GCGTTGCATATATTGTGGTGTAG back to topCoding sequence (CDS) from alignment at scaffold_26:24016..25988- >mRNA_8498 ID=mRNA_8498|Name=jgi.p|Nanoce1779_2|206185|organism=Nannochloropsis oceanica|type=CDS|length=5481bp|location=Sequence derived from alignment at scaffold_26:24016..25988- (Nannochloropsis oceanica)
GGAAGATGCTACATGTACAATGAGGGAAGGTGTGTGCTGTCGCTGCGCAG
GGAGGGAGGGAAGGAGGGAAGGAGGGAGAGCGGGAGGGAGCATAAGCTGC
AACAGGGGACAATCGGGCAGGATAGTCATAGCAGTAGCAGTAGCAGTGAG
GGAAAATGCAATGACCAGCAACCAACAGACACTTAGCACGGGTTTTGTCC
CTCCCTCGCCCCCTCTTTCCGCACCGTCGACACTGCCTTCACTTGTCGCC
CCAGTCGGGATTTTTTCTTCCTCTGTCTGGCTGGCCTCCTCTTCCTTCTG
GCCTCCTTCTCCTCCTTCTTCACTGCCCGCCTTCCTGCCCCCTCACCGTC
GGCCCTGGCGGTGTCGGGGAACCCAAAGCCCCTCCAGATCGCCTTTGCTC
TAGTTACTCTCCTCGGCACCATTGCTTGCGCCGTCTCTGCTTACTTCTGG
ATGGACGTGCAGCGACTGGGCAACGTCCCACCGTCCCTCTTCGATCCTGC
CTGGTGTGGCGCCGACGACAACCACTTGTCGGCCTCCCTCCCCTCCACGC
CGTGGTGCTCCTCCGTCACTGCTGTCAAGGCCCTCACCCTCACTGGCCTC
CTCCTGAATGGCTCGTCGCTCGCGTAAAAGATCCGCAGCTCCCACAAAAA
CTAACTGTTGGTCTCTACACTGGCTATCAGCGCGGCGTTTCGTTGCCATG
GTTTTTTTTAGCGTGCCTTGGCTCTATCGGCGGCATCATCTTCCTAGCTC
TGGCAGAGGGGAGTAACGATGACAAACGAAAAGGGAAGATGCTACATGTA
CAATGAGGGAAGGTGTGTGCTGTCGCTGCGCAGGGAGGGAGGGAAGGAGG
GAAGGAGGGAGAGCGGGAGGGAGCATAAGCTGCAACAGGGGACAATCGGG
CAGGATAGTCATAGCAGTAGCAGTAGCAGTGAGGGAAAATGCAATGACCA
GCAACCAACAGACACTTAGCACGGGTTTTGTCCCTCCCTCGCCCCCTCTT
TCCGCACCGTCGACACTGCCTTCACTTGTCGCCCCAGTCGGGATTTTTTC
TTCCTCTGTCTGGCTGGCCTCCTCTTCCTTCTGGCCTCCTTCTCCTCCTT
CTTCACTGCCCGCCTTCCTGCCCCCTCACCGTCGGCCCTGGCGGTGTCGG
GGAACCCAAAGCCCCTCCAGATCGCCTTTGCTCTAGTTACTCTCCTCGGC
ACCATTGCTTGCGCCGTCTCTGCTTACTTCTGGATGGACGTGCAGCGACT
GGGCAACGTCCCACCGTCCCTCTTCGATCCTGCCTGGTGTGGCGCCGACG
ACAACCACTTGTCGGCCTCCCTCCCCTCCACGCCGTGGTGCTCCTCCGTC
ACTGCTGTCAAGGCCCTCACCCTCACTGGCCTCCTCCTGAATGGCTCGTC
GCTCGCGTAAAAGATCCGCAGCTCCCACAAAAACTAACTGTTGGTCTCTA
CACTGGCTATCAGCGCGGCGTTTCGTTGCCATGGTTTTTTTTAGCGTGCC
TTGGCTCTATCGGCGGCATCATCTTCCTAGCTCTGGCAGAGGGGAGTAAC
GATGACAAACGAAAAGGGAAGATGCTACATGTACAATGAGGGAAGGTGTG
TGCTGTCGCTGCGCAGGGAGGGAGGGAAGGAGGGAAGGAGGGAGAGCGGG
AGGGAGCATAAGCTGCAACAGGGGACAATCGGGCAGGATAGTCATAGCAG
TAGCAGTAGCAGTGAGGGAAAATGCAATGACCAGCAACCAACAGACACTT
AGCACGGGTTTTGTCCCTCCCTCGCCCCCTCTTTCCGCACCGTCGACACT
GCCTTCACTTGTCGCCCCAGTCGGGATTTTTTCTTCCTCTGTCTGGCTGG
CCTCCTCTTCCTTCTGGCCTCCTTCTCCTCCTTCTTCACTGCCCGCCTTC
CTGCCCCCTCACCGTCGGCCCTGGCGGTGTCGGGGAACCCAAAGCCCCTC
CAGATCGCCTTTGCTCTAGTTACTCTCCTCGGCACCATTGCTTGCGCCGT
CTCTGCTTACTTCTGGATGGACGTGCAGCGACTGGGCAACGTCCCACCGT
CCCTCTTCGATCCTGCCTGGTGTGGCGCCGACGACAACCACTTGTCGGCC
TCCCTCCCCTCCACGCCGTGGTGCTCCTCCGTCACTGCTGTCAAGGCCCT
CACCCTCACTGGCCTCCTCCTGAATGGCTCGTCGCTCGCGTAAAAGATCC
GCAGCTCCCACAAAAACTAACTGTTGGTCTCTACACTGGCTATCAGCGCG
GCGTTTCGTTGCCATGGTTTTTTTTAGCGTGCCTTGGCTCTATCGGCGGC
ATCATCTTCCTAGCTCTGGCAGAGGGGAGTAACGATGACAAACGAAAAGG
GAAGATGCTACATGTACAATGAGGGAAGGTGTGTGCTGTCGCTGCGCAGG
GAGGGAGGGAAGGAGGGAAGGAGGGAGAGCGGGAGGGAGCATAAGCTGCA
ACAGGGGACAATCGGGCAGGATAGTCATAGCAGTAGCAGTAGCAGTGAGG
GAAAATGCAATGACCAGCAACCAACAGACACTTAGCACGGGTTTTGTCCC
TCCCTCGCCCCCTCTTTCCGCACCGTCGACACTGCCTTCACTTGTCGCCC
CAGTCGGGATTTTTTCTTCCTCTGTCTGGCTGGCCTCCTCTTCCTTCTGG
CCTCCTTCTCCTCCTTCTTCACTGCCCGCCTTCCTGCCCCCTCACCGTCG
GCCCTGGCGGTGTCGGGGAACCCAAAGCCCCTCCAGATCGCCTTTGCTCT
AGTTACTCTCCTCGGCACCATTGCTTGCGCCGTCTCTGCTTACTTCTGGA
TGGACGTGCAGCGACTGGGCAACGTCCCACCGTCCCTCTTCGATCCTGCC
TGGTGTGGCGCCGACGACAACCACTTGTCGGCCTCCCTCCCCTCCACGCC
GTGGTGCTCCTCCGTCACTGCTGTCAAGGCCCTCACCCTCACTGGCCTCC
TCCTGAATGGCTCGTCGCTCGCGTAAAAGATCCGCAGCTCCCACAAAAAC
TAACTGTTGGTCTCTACACTGGCTATCAGCGCGGCGTTTCGTTGCCATGG
TTTTTTTTAGCGTGCCTTGGCTCTATCGGCGGCATCATCTTCCTAGCTCT
GGCAGAGGGGAGTAACGATGACAAACGAAAAGGGAAGATGCTACATGTAC
AATGAGGGAAGGTGTGTGCTGTCGCTGCGCAGGGAGGGAGGGAAGGAGGG
AAGGAGGGAGAGCGGGAGGGAGCATAAGCTGCAACAGGGGACAATCGGGC
AGGATAGTCATAGCAGTAGCAGTAGCAGTGAGGGAAAATGCAATGACCAG
CAACCAACAGACACTTAGCACGGGTTTTGTCCCTCCCTCGCCCCCTCTTT
CCGCACCGTCGACACTGCCTTCACTTGTCGCCCCAGTCGGGATTTTTTCT
TCCTCTGTCTGGCTGGCCTCCTCTTCCTTCTGGCCTCCTTCTCCTCCTTC
TTCACTGCCCGCCTTCCTGCCCCCTCACCGTCGGCCCTGGCGGTGTCGGG
GAACCCAAAGCCCCTCCAGATCGCCTTTGCTCTAGTTACTCTCCTCGGCA
CCATTGCTTGCGCCGTCTCTGCTTACTTCTGGATGGACGTGCAGCGACTG
GGCAACGTCCCACCGTCCCTCTTCGATCCTGCCTGGTGTGGCGCCGACGA
CAACCACTTGTCGGCCTCCCTCCCCTCCACGCCGTGGTGCTCCTCCGTCA
CTGCTGTCAAGGCCCTCACCCTCACTGGCCTCCTCCTGAATGGCTCGTCG
CTCGCGTAAAAGATCCGCAGCTCCCACAAAAACTAACTGTTGGTCTCTAC
ACTGGCTATCAGCGCGGCGTTTCGTTGCCATGGTTTTTTTTAGCGTGCCT
TGGCTCTATCGGCGGCATCATCTTCCTAGCTCTGGCAGAGGGGAGTAACG
ATGACAAACGAAAAGGGAAGATGCTACATGTACAATGAGGGAAGGTGTGT
GCTGTCGCTGCGCAGGGAGGGAGGGAAGGAGGGAAGGAGGGAGAGCGGGA
GGGAGCATAAGCTGCAACAGGGGACAATCGGGCAGGATAGTCATAGCAGT
AGCAGTAGCAGTGAGGGAAAATGCAATGACCAGCAACCAACAGACACTTA
GCACGGGTTTTGTCCCTCCCTCGCCCCCTCTTTCCGCACCGTCGACACTG
CCTTCACTTGTCGCCCCAGTCGGGATTTTTTCTTCCTCTGTCTGGCTGGC
CTCCTCTTCCTTCTGGCCTCCTTCTCCTCCTTCTTCACTGCCCGCCTTCC
TGCCCCCTCACCGTCGGCCCTGGCGGTGTCGGGGAACCCAAAGCCCCTCC
AGATCGCCTTTGCTCTAGTTACTCTCCTCGGCACCATTGCTTGCGCCGTC
TCTGCTTACTTCTGGATGGACGTGCAGCGACTGGGCAACGTCCCACCGTC
CCTCTTCGATCCTGCCTGGTGTGGCGCCGACGACAACCACTTGTCGGCCT
CCCTCCCCTCCACGCCGTGGTGCTCCTCCGTCACTGCTGTCAAGGCCCTC
ACCCTCACTGGCCTCCTCCTGAATGGCTCGTCGCTCGCGTAAAAGATCCG
CAGCTCCCACAAAAACTAACTGTTGGTCTCTACACTGGCTATCAGCGCGG
CGTTTCGTTGCCATGGTTTTTTTTAGCGTGCCTTGGCTCTATCGGCGGCA
TCATCTTCCTAGCTCTGGCAGAGGGGAGTAACGATGACAAACGAAAAGGG
AAGATGCTACATGTACAATGAGGGAAGGTGTGTGCTGTCGCTGCGCAGGG
AGGGAGGGAAGGAGGGAAGGAGGGAGAGCGGGAGGGAGCATAAGCTGCAA
CAGGGGACAATCGGGCAGGATAGTCATAGCAGTAGCAGTAGCAGTGAGGG
AAAATGCAATGACCAGCAACCAACAGACACTTAGCACGGGTTTTGTCCCT
CCCTCGCCCCCTCTTTCCGCACCGTCGACACTGCCTTCACTTGTCGCCCC
AGTCGGGATTTTTTCTTCCTCTGTCTGGCTGGCCTCCTCTTCCTTCTGGC
CTCCTTCTCCTCCTTCTTCACTGCCCGCCTTCCTGCCCCCTCACCGTCGG
CCCTGGCGGTGTCGGGGAACCCAAAGCCCCTCCAGATCGCCTTTGCTCTA
GTTACTCTCCTCGGCACCATTGCTTGCGCCGTCTCTGCTTACTTCTGGAT
GGACGTGCAGCGACTGGGCAACGTCCCACCGTCCCTCTTCGATCCTGCCT
GGTGTGGCGCCGACGACAACCACTTGTCGGCCTCCCTCCCCTCCACGCCG
TGGTGCTCCTCCGTCACTGCTGTCAAGGCCCTCACCCTCACTGGCCTCCT
CCTGAATGGCTCGTCGCTCGCGTAAAAGATCCGCAGCTCCCACAAAAACT
AACTGTTGGTCTCTACACTGGCTATCAGCGCGGCGTTTCGTTGCCATGGT
TTTTTTTAGCGTGCCTTGGCTCTATCGGCGGCATCATCTTCCTAGCTCTG
GCAGAGGGGAGTAACGATGACAAACGAAAAG back to top
|