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Properties
| Property Name | Value |
|---|
| TranscriptId | 641990 |
| Track | FilteredModels2 |
| ProteinId | 641904 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_26 | supercontig | scaffold_26:22001..23588 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8497 ID=mRNA_8497|Name=jgi.p|Nanoce1779_2|641904|organism=Nannochloropsis oceanica|type=mRNA|length=837bp
ATGGAAGCAGCAGCAACAGCTGAAGAGCAAGGAGAGGAACGTACCCCTCC
GTCGTCGCCTGAGGTGGGAGGAGAGGAAGGAGGGTTGGAGGTGGTGGAGG
TGGCGAGGTCAGATGAGGGAGAGGCCTCGGAGGAGGAGACGGAGGAAGAA
AAGGAGGAGGAGGATGGTAGCAGCAGCAGGAGCAGCAGCCCAAGCAGGAA
GAGGATGCAAGAGGACGAGAAGAAGGCGAGCAGCCGGAAGAGGACCAAGA
AGGAGGAGGAACAAAAGCCGAATGTTGAGCAGGAGGAGGAGGGAGGGAAG
GAGGTAGGAGTGGAGGAGGAGGAAGAGGAGGAACAGGAGGAGGAAAAGGA
GGAGGAGGAGGAGATGGAGATTGTTATCTCCCCTTCTTCCTCCATGGAGA
AGAGGACTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAAAGTAGTGATGAAGGAAGC
CGCTACAGCGCTGATCTGGCGGCAAGAGGTGGAGGAGGAGGAAGAAGAGA
AGGAGGAGAAGGTCGTGGAGGAGGAGGAGCAGGAGGACGAGAGGGCTGCC
AAGCGTGGTCGTGGGCGGCCTCGCAAACCAAAGCCTAAAATAGTGTACGA
TAAAGCAACATTAATGGCCAATGTGCGGCTCTACCTTGGAGAGGGCGGGA
AGGAGGGCGAGAAGGAGGCAGGGGGGGAAGGAGGGAGGGAGACGCCGAAC
AGGGAAGTGTTGGCGTGGATGGAGGGAGCGAAAGAGGAAGTGGTTGAGGC
CCTGGTGCATGCCGTGGTAGAGTGCTTGGAAGCCTAG back to topprotein sequence of jgi.p|Nanoce1779_2|641904 >mRNA_8497-protein ID=mRNA_8497-protein|Name=jgi.p|Nanoce1779_2|641904|organism=Nannochloropsis oceanica|type=polypeptide|length=279bp
MEAAATAEEQGEERTPPSSPEVGGEEGGLEVVEVARSDEGEASEEETEEE
KEEEDGSSSRSSSPSRKRMQEDEKKASSRKRTKKEEEQKPNVEQEEEGGK
EVGVEEEEEEEQEEEKEEEEEMEIVISPSSSMEKRTGGGGGGGGGGGGGG
GGGGGGGGGGKVVMKEAATALIWRQEVEEEEEEKEEKVVEEEEQEDERAA
KRGRGRPRKPKPKIVYDKATLMANVRLYLGEGGKEGEKEAGGEGGRETPN
REVLAWMEGAKEEVVEALVHAVVECLEA* back to topmRNA from alignment at scaffold_26:22001..23588+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8497 ID=mRNA_8497|Name=jgi.p|Nanoce1779_2|641904|organism=Nannochloropsis oceanica|type=mRNA|length=1588bp|location=Sequence derived from alignment at scaffold_26:22001..23588+ (Nannochloropsis oceanica)
ATGGAAGCAGCAGCAACAGCTGAAGAGCAAGGAGAGGAACGTACCCCTCC
GTCGTCGCCTGAGGTGGGAGGAGAGGAAGGAGGGTTGGAGGTGGTGGAGG
TGGCGAGGTCAGATGAGGGAGAGGCCTCGGAGGAGGAGACGGAGGAAGAA
AAGGAGGAGGAGGATGGTAGCAGCAGCAGGAGCAGCAGCCCAAGCAGGAA
GAGGATGCAAGAGGACGAGAAGAAGGCGAGCAGCCGGAAGAGGACCAAGA
AGGAGGAGGAAGTAAGAGATGCAAAAGGAGGGGAAGGGGCAAGTCGTGAC
GGCAGCTCCTGCACTGTCTGTCCACCTACAAAGCAAAAGCCGAATGTTGA
GCAGGAGGAGGAGGGAGGGAAGGAGGTAGGAGTGGAGGAGGAGGAAGAGG
AGGAACAGGAGGAGGAAAAGGAGGAGGAGGAGGAGATGGAGATTGTTATC
TCCCCTTCTTCCTCCATGGAGTCAGGAGAGGGAAGGAGAGAGGGGAGGGA
AAAAAAAAACGACAGTGGAGGCTCCCGTGAAACGTGGGAGAGGCCGACCT
AGGAAGGGGACTGCTGGAGGAGGAGGAGGAGGGGTTGTCATTCCCCCTTC
CTCCTCGATGGAAAAAGGAGAGAAAGAGGGGGAGAGTGGAGAGAAAGAAG
AGAAAATGGAGGCTCCGGTAAAACGGGGTCGGGGCCGACCAAGGAAGAGG
ACTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGGAAAGTAGTGATGAAGGAAGCCGCTA
CAGCGGTCAGAGGAAAGAAAAGAGGCCGCCCTTCTAAGGCTGAGCTGGCG
GCAAGAGAAGGAGTGGTAGCGGCAGCAGCAACAACAGTAGCAGCAATAAC
AGGAAGAGGGGGAGGGGGAGAGGGAGGGGGAGTGAGGAAGAGGGGCCGTC
CCTCCAAAGCTGATCTGGCGGCAAGAGGTGGAGGAGGAGGAAGAAGAGAA
GGAGGAGAAGGTCGTGGAGGAGGAGGAGCAGGAGGACGAGAGGGCTGTAA
ACTGAGCATCGCTCCCGCATTCGCAGCGACAGGGCAGCCGGTACGCGTCT
TTCCCCTCCCTCCCTCCCTCCCTCCTTCCCTGTCTCACCTGGTGCGATGC
CAAGGCTGACATAGACTGAAGACGTCGTCTTATTCCACGCCCCTGCCGCT
CGCTTTCTTTTCTATCTCCGTTTCGTCTTCCCCCCCCCTCCCTTCTTCTT
TCCCTCTCTTTTCCCCTTTCCCTCCCTGATATTTGGAGAAACATACACCC
TAACGCCCCCTACCACCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTAGGC
CAAGCGTGGTCGTGGGCGGCCTCGCAAACCAAAGCCTAAAATAGTGTACG
ATAAAGCAACATTAATGGCCAATGTGCGGCTCTACCTTGGAGAGGGCGGG
AAGGAGGGCGAGAAGGAGGCAGGGGGGGAAGGAGGGAGGGAGACGCCGAA
CAGGGAAGTGTTGGCGTGGATGGAGGGAGCGAAAGAGGAAGTGGTTGAGG
CCCTGGTGCATGCCGTGGTAGAGTGCTTGGAAGCCTAG back to topCoding sequence (CDS) from alignment at scaffold_26:22001..23588+ >mRNA_8497 ID=mRNA_8497|Name=jgi.p|Nanoce1779_2|641904|organism=Nannochloropsis oceanica|type=CDS|length=4185bp|location=Sequence derived from alignment at scaffold_26:22001..23588+ (Nannochloropsis oceanica)
ATGGAAGCAGCAGCAACAGCTGAAGAGCAAGGAGAGGAACGTACCCCTCC
GTCGTCGCCTGAGGTGGGAGGAGAGGAAGGAGGGTTGGAGGTGGTGGAGG
TGGCGAGGTCAGATGAGGGAGAGGCCTCGGAGGAGGAGACGGAGGAAGAA
AAGGAGGAGGAGGATGGTAGCAGCAGCAGGAGCAGCAGCCCAAGCAGGAA
GAGGATGCAAGAGGACGAGAAGAAGGCGAGCAGCCGGAAGAGGACCAAGA
AGGAGGAGGAACAAAAGCCGAATGTTGAGCAGGAGGAGGAGGGAGGGAAG
GAGGTAGGAGTGGAGGAGGAGGAAGAGGAGGAACAGGAGGAGGAAAAGGA
GGAGGAGGAGGAGATGGAGATTGTTATCTCCCCTTCTTCCTCCATGGAGA
AGAGGACTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAAAGTAGTGATGAAGGAAGC
CGCTACAGCGCTGATCTGGCGGCAAGAGGTGGAGGAGGAGGAAGAAGAGA
AGGAGGAGAAGGTCGTGGAGGAGGAGGAGCAGGAGGACGAGAGGGCTGCC
AAGCGTGGTCGTGGGCGGCCTCGCAAACCAAAGCCTAAAATAGTGTACGA
TAAAGCAACATTAATGGCCAATGTGCGGCTCTACCTTGGAGAGGGCGGGA
AGGAGGGCGAGAAGGAGGCAGGGGGGGAAGGAGGGAGGGAGACGCCGAAC
AGGGAAGTGTTGGCGTGGATGGAGGGAGCGAAAGAGGAAGTGGTTGAGGC
CCTGGTGCATGCCGTGGTAGAGTGCTTGGAAGCCTAGATGGAAGCAGCAG
CAACAGCTGAAGAGCAAGGAGAGGAACGTACCCCTCCGTCGTCGCCTGAG
GTGGGAGGAGAGGAAGGAGGGTTGGAGGTGGTGGAGGTGGCGAGGTCAGA
TGAGGGAGAGGCCTCGGAGGAGGAGACGGAGGAAGAAAAGGAGGAGGAGG
ATGGTAGCAGCAGCAGGAGCAGCAGCCCAAGCAGGAAGAGGATGCAAGAG
GACGAGAAGAAGGCGAGCAGCCGGAAGAGGACCAAGAAGGAGGAGGAACA
AAAGCCGAATGTTGAGCAGGAGGAGGAGGGAGGGAAGGAGGTAGGAGTGG
AGGAGGAGGAAGAGGAGGAACAGGAGGAGGAAAAGGAGGAGGAGGAGGAG
ATGGAGATTGTTATCTCCCCTTCTTCCTCCATGGAGAAGAGGACTGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGGAAAGTAGTGATGAAGGAAGCCGCTACAGCGCTG
ATCTGGCGGCAAGAGGTGGAGGAGGAGGAAGAAGAGAAGGAGGAGAAGGT
CGTGGAGGAGGAGGAGCAGGAGGACGAGAGGGCTGCCAAGCGTGGTCGTG
GGCGGCCTCGCAAACCAAAGCCTAAAATAGTGTACGATAAAGCAACATTA
ATGGCCAATGTGCGGCTCTACCTTGGAGAGGGCGGGAAGGAGGGCGAGAA
GGAGGCAGGGGGGGAAGGAGGGAGGGAGACGCCGAACAGGGAAGTGTTGG
CGTGGATGGAGGGAGCGAAAGAGGAAGTGGTTGAGGCCCTGGTGCATGCC
GTGGTAGAGTGCTTGGAAGCCTAGATGGAAGCAGCAGCAACAGCTGAAGA
GCAAGGAGAGGAACGTACCCCTCCGTCGTCGCCTGAGGTGGGAGGAGAGG
AAGGAGGGTTGGAGGTGGTGGAGGTGGCGAGGTCAGATGAGGGAGAGGCC
TCGGAGGAGGAGACGGAGGAAGAAAAGGAGGAGGAGGATGGTAGCAGCAG
CAGGAGCAGCAGCCCAAGCAGGAAGAGGATGCAAGAGGACGAGAAGAAGG
CGAGCAGCCGGAAGAGGACCAAGAAGGAGGAGGAACAAAAGCCGAATGTT
GAGCAGGAGGAGGAGGGAGGGAAGGAGGTAGGAGTGGAGGAGGAGGAAGA
GGAGGAACAGGAGGAGGAAAAGGAGGAGGAGGAGGAGATGGAGATTGTTA
TCTCCCCTTCTTCCTCCATGGAGAAGAGGACTGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGGAAAGTAGTGATGAAGGAAGCCGCTACAGCGCTGATCTGGCGGCAAG
AGGTGGAGGAGGAGGAAGAAGAGAAGGAGGAGAAGGTCGTGGAGGAGGAG
GAGCAGGAGGACGAGAGGGCTGCCAAGCGTGGTCGTGGGCGGCCTCGCAA
ACCAAAGCCTAAAATAGTGTACGATAAAGCAACATTAATGGCCAATGTGC
GGCTCTACCTTGGAGAGGGCGGGAAGGAGGGCGAGAAGGAGGCAGGGGGG
GAAGGAGGGAGGGAGACGCCGAACAGGGAAGTGTTGGCGTGGATGGAGGG
AGCGAAAGAGGAAGTGGTTGAGGCCCTGGTGCATGCCGTGGTAGAGTGCT
TGGAAGCCTAGATGGAAGCAGCAGCAACAGCTGAAGAGCAAGGAGAGGAA
CGTACCCCTCCGTCGTCGCCTGAGGTGGGAGGAGAGGAAGGAGGGTTGGA
GGTGGTGGAGGTGGCGAGGTCAGATGAGGGAGAGGCCTCGGAGGAGGAGA
CGGAGGAAGAAAAGGAGGAGGAGGATGGTAGCAGCAGCAGGAGCAGCAGC
CCAAGCAGGAAGAGGATGCAAGAGGACGAGAAGAAGGCGAGCAGCCGGAA
GAGGACCAAGAAGGAGGAGGAACAAAAGCCGAATGTTGAGCAGGAGGAGG
AGGGAGGGAAGGAGGTAGGAGTGGAGGAGGAGGAAGAGGAGGAACAGGAG
GAGGAAAAGGAGGAGGAGGAGGAGATGGAGATTGTTATCTCCCCTTCTTC
CTCCATGGAGAAGAGGACTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAAAGTAGTG
ATGAAGGAAGCCGCTACAGCGCTGATCTGGCGGCAAGAGGTGGAGGAGGA
GGAAGAAGAGAAGGAGGAGAAGGTCGTGGAGGAGGAGGAGCAGGAGGACG
AGAGGGCTGCCAAGCGTGGTCGTGGGCGGCCTCGCAAACCAAAGCCTAAA
ATAGTGTACGATAAAGCAACATTAATGGCCAATGTGCGGCTCTACCTTGG
AGAGGGCGGGAAGGAGGGCGAGAAGGAGGCAGGGGGGGAAGGAGGGAGGG
AGACGCCGAACAGGGAAGTGTTGGCGTGGATGGAGGGAGCGAAAGAGGAA
GTGGTTGAGGCCCTGGTGCATGCCGTGGTAGAGTGCTTGGAAGCCTAGAT
GGAAGCAGCAGCAACAGCTGAAGAGCAAGGAGAGGAACGTACCCCTCCGT
CGTCGCCTGAGGTGGGAGGAGAGGAAGGAGGGTTGGAGGTGGTGGAGGTG
GCGAGGTCAGATGAGGGAGAGGCCTCGGAGGAGGAGACGGAGGAAGAAAA
GGAGGAGGAGGATGGTAGCAGCAGCAGGAGCAGCAGCCCAAGCAGGAAGA
GGATGCAAGAGGACGAGAAGAAGGCGAGCAGCCGGAAGAGGACCAAGAAG
GAGGAGGAACAAAAGCCGAATGTTGAGCAGGAGGAGGAGGGAGGGAAGGA
GGTAGGAGTGGAGGAGGAGGAAGAGGAGGAACAGGAGGAGGAAAAGGAGG
AGGAGGAGGAGATGGAGATTGTTATCTCCCCTTCTTCCTCCATGGAGAAG
AGGACTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGGAAAGTAGTGATGAAGGAAGCCG
CTACAGCGCTGATCTGGCGGCAAGAGGTGGAGGAGGAGGAAGAAGAGAAG
GAGGAGAAGGTCGTGGAGGAGGAGGAGCAGGAGGACGAGAGGGCTGCCAA
GCGTGGTCGTGGGCGGCCTCGCAAACCAAAGCCTAAAATAGTGTACGATA
AAGCAACATTAATGGCCAATGTGCGGCTCTACCTTGGAGAGGGCGGGAAG
GAGGGCGAGAAGGAGGCAGGGGGGGAAGGAGGGAGGGAGACGCCGAACAG
GGAAGTGTTGGCGTGGATGGAGGGAGCGAAAGAGGAAGTGGTTGAGGCCC
TGGTGCATGCCGTGGTAGAGTGCTTGGAAGCCTAG back to top
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