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Properties
| Property Name | Value |
|---|
| TranscriptId | 602893 |
| Track | FilteredModels2 |
| ProteinId | 602807 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_26 | supercontig | scaffold_26:3597..5383 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8491 ID=mRNA_8491|Name=jgi.p|Nanoce1779_2|602807|organism=Nannochloropsis oceanica|type=mRNA|length=1624bp
CGAATTATAAGAAGATGGGGACCCCCTTGCGTTCGGTGATGCAGCAACAC
GTGGATTTCTTCGACCGTGACGGGGACGGGGTCATTACCATGCGGGACAC
CTTTTTCGGGTACGTTTTTAGGGTTAAGGCTCGATCCTGCTCCCCCTCTT
TCCCTCCTTCCTTCATTCTTCCTCTGGCTCCTTTTGGAGCCGTCATTTTA
TCACCAATCGCTATCTCACTCTTCCTTTCAACCTTTCCCTCGCTCTTTCT
TCTCCACAGGTTTCGCCGCCTGGGCTTCAATTGGGCCTTTTGCCTGTGGG
CAGGTACACTTACACCTCGTCCTCCTTCCCTCCCTCATCTCTTTCCCCCT
CCGTTGCTTTCTCCCACCGCTCATTTTTCTTTTTTGCTACATACACCTCA
TCGGTGACCATATCTTAGAATTGCACCTACATCATCATCATTAATCGCGT
TAATATCTAATCCTCTTTCTCCCCACCCTCCTTCCCCTTCTTCCTCCCTT
TATTACTTCCGATCCCCGTCTTCTCCTCTCAGTCTTCGTCATTAATCCCG
CGTTTTCCATTGCCTCTTACCCGGGCTATTTCATTGACCCCTTCATGCGC
ATCTACTCCCGTAACATCCACCGTGGCAAGCATGGAAGTGACCAGGAGGT
ATACGATCACGAAGGTAGGAGGGAGGGCAGGGAGGGGAGGAGGGGCAGGG
AAGAGGGGAGGGAAGATCCGACGCTGGAACCTTCTCTTTTCACATTATTC
TTCTTTTCTAAGGCTCTCTTCTTCTATCCTACCCTTCCTCTATATATAGG
TCGCTTCATTCCTCAGCGCTTTGAAGACATTTTTGCCAAGTGGGATCAAG
AGGGAAAGGGCGGCCTTAGCCTCCGTGACTTGTGGTACAAAGGGACGAGG
GGAAGGAGAGAGGGAGAGGAGGAGCAAGGAAAAGACAAAGCCCACAAGAG
AAGCGGATTTAGAGACATTGTCGAAGTTTCGTGTTCATAGCAAACTGCTC
ACCTTGCGTCTTATCTTTGCTCCCTCCTTCTACCCTTTCCCCTTCCCTCC
CCTTTCCTCCCTTTTCTCCTTTAACCGTTAGGAAAATGACGCAGAGCTCC
TTCGAGGTGAATGATTTCTTCGGCTGGTTCGCCGGCAAGTTCGAGTGGTT
TACCCTCTGGCTTCTCACTGCTGATGACAAGGGCCTGGTGACCAAAGAGG
CCGTGCGGAGTGTTTATGACGGAAGCTTGTTCTACAAGATGGAGGTAGGG
GGGGAGGGGCTTTTCGGAGGGGAGGGGGGAGGGATGGGAAGTAGAAGGAT
AAGAAAGTGGTGTATGACCTAATCATGTGCCCTCTCCATTATCACTCCCT
CCCTTCTTGAAATATAGGCCAAGTGGGGGCATGGGGCGCCGGCGAGTGAG
TTGGGTGAATACGCGAACATGGGAGAAGGGTCGACGTTCAGCGCCTTGTG
GGCACGGCTGAGGGGAGGACAGAAGGGTCGAGAGAAAGCGGTGACGGAGC
AGGTGACGATGGAGGGGAAGAGCAAGCGTCAGTAAGAAGGGGGACAGAGA
GAAGGGCTCGATAGGGAATCGAAACTCGAACAAAACGGCCGGGCCATGTG
ACGATATCTGTGTGACCAGCGCTG back to topprotein sequence of jgi.p|Nanoce1779_2|602807 >mRNA_8491-protein ID=mRNA_8491-protein|Name=jgi.p|Nanoce1779_2|602807|organism=Nannochloropsis oceanica|type=polypeptide|length=79bp
MTQSSFEVNDFFGWFAGKFEWFTLWLLTADDKGLVTKEAVRSVYDGSLFY
KMEVGGEGLFGGEGGGMGSRRIRKWCMT* back to topmRNA from alignment at scaffold_26:3597..5383+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8491 ID=mRNA_8491|Name=jgi.p|Nanoce1779_2|602807|organism=Nannochloropsis oceanica|type=mRNA|length=1787bp|location=Sequence derived from alignment at scaffold_26:3597..5383+ (Nannochloropsis oceanica)
CGAATTATAAGAAGATGGGGACCCCCTTGCGTTCGGTGTGTGAGAATGGG
AGGGAGGATGCCGAGAGATGAAAAATAGGGGAGGGAGGGCGAACTTTGTG
AAGAGGAAGGAAGGGAAAGAGGGAGGGAGGATACTCGTGGGAAAAAAAGG
TATTGCGAGGCCCACGGCTAAAGGAACTCTTATTCTGTTAACCACCAGGT
GATGCAGCAACACGTGGATTTCTTCGACCGTGACGGGGACGGGGTCATTA
CCATGCGGGACACCTTTTTCGGGTACGTTTTTAGGGTTAAGGCTCGATCC
TGCTCCCCCTCTTTCCCTCCTTCCTTCATTCTTCCTCTGGCTCCTTTTGG
AGCCGTCATTTTATCACCAATCGCTATCTCACTCTTCCTTTCAACCTTTC
CCTCGCTCTTTCTTCTCCACAGGTTTCGCCGCCTGGGCTTCAATTGGGCC
TTTTGCCTGTGGGCAGGTACACTTACACCTCGTCCTCCTTCCCTCCCTCA
TCTCTTTCCCCCTCCGTTGCTTTCTCCCACCGCTCATTTTTCTTTTTTGC
TACATACACCTCATCGGTGACCATATCTTAGAATTGCACCTACATCATCA
TCATTAATCGCGTTAATATCTAATCCTCTTTCTCCCCACCCTCCTTCCCC
TTCTTCCTCCCTTTATTACTTCCGATCCCCGTCTTCTCCTCTCAGTCTTC
GTCATTAATCCCGCGTTTTCCATTGCCTCTTACCCGGGCTATTTCATTGA
CCCCTTCATGCGCATCTACTCCCGTAACATCCACCGTGGCAAGCATGGAA
GTGACCAGGAGGTATACGATCACGAAGGTAGGAGGGAGGGCAGGGAGGGG
AGGAGGGGCAGGGAAGAGGGGAGGGAAGATCCGACGCTGGAACCTTCTCT
TTTCACATTATTCTTCTTTTCTAAGGCTCTCTTCTTCTATCCTACCCTTC
CTCTATATATAGGTCGCTTCATTCCTCAGCGCTTTGAAGACATTTTTGCC
AAGTGGGATCAAGAGGGAAAGGGCGGCCTTAGCCTCCGTGACTTGTGGTA
CAAAGGGACGAGGGGAAGGAGAGAGGGAGAGGAGGAGCAAGGAAAAGACA
AAGCCCACAAGAGAAGCGGATTTAGAGACATTGTCGAAGTTTCGTGTTCA
TAGCAAACTGCTCACCTTGCGTCTTATCTTTGCTCCCTCCTTCTACCCTT
TCCCCTTCCCTCCCCTTTCCTCCCTTTTCTCCTTTAACCGTTAGGAAAAT
GACGCAGAGCTCCTTCGAGGTGAATGATTTCTTCGGCTGGTTCGCCGGCA
AGTTCGAGTGGTTTACCCTCTGGCTTCTCACTGCTGATGACAAGGGCCTG
GTGACCAAAGAGGCCGTGCGGAGTGTTTATGACGGAAGCTTGTTCTACAA
GATGGAGGTAGGGGGGGAGGGGCTTTTCGGAGGGGAGGGGGGAGGGATGG
GAAGTAGAAGGATAAGAAAGTGGTGTATGACCTAATCATGTGCCCTCTCC
ATTATCACTCCCTCCCTTCTTGAAATATAGGCCAAGTGGGGGCATGGGGC
GCCGGCGAGTGAGTTGGGTGAATACGCGAACATGGGAGAAGGGTCGACGT
TCAGCGCCTTGTGGGCACGGCTGAGGGGAGGACAGAAGGGTCGAGAGAAA
GCGGTGACGGAGCAGGTGACGATGGAGGGGAAGAGCAAGCGTCAGTAAGA
AGGGGGACAGAGAGAAGGGCTCGATAGGGAATCGAAACTCGAACAAAACG
GCCGGGCCATGTGACGATATCTGTGTGACCAGCGCTG back to topCoding sequence (CDS) from alignment at scaffold_26:3597..5383+ >mRNA_8491 ID=mRNA_8491|Name=jgi.p|Nanoce1779_2|602807|organism=Nannochloropsis oceanica|type=CDS|length=237bp|location=Sequence derived from alignment at scaffold_26:3597..5383+ (Nannochloropsis oceanica)
ATGACGCAGAGCTCCTTCGAGGTGAATGATTTCTTCGGCTGGTTCGCCGG
CAAGTTCGAGTGGTTTACCCTCTGGCTTCTCACTGCTGATGACAAGGGCC
TGGTGACCAAAGAGGCCGTGCGGAGTGTTTATGACGGAAGCTTGTTCTAC
AAGATGGAGGTAGGGGGGGAGGGGCTTTTCGGAGGGGAGGGGGGAGGGAT
GGGAAGTAGAAGGATAAGAAAGTGGTGTATGACCTAA back to top
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