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Properties
| Property Name | Value |
|---|
| TranscriptId | 655977 |
| Track | FilteredModels2 |
| ProteinId | 655891 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_24 | supercontig | scaffold_24:417461..418608 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8482 ID=mRNA_8482|Name=jgi.p|Nanoce1779_2|655891|organism=Nannochloropsis oceanica|type=mRNA|length=963bp
ACACACACACACACACACACACACACACAAAGGCCAAGTCTTCGCCCCTC
GTCTCCCGTCCTTCTCCGAGCCTGATTCCTCACTCTTACGTGACTTTTAC
CCCGCGCAAGGGAAGGAATCAAGGAGGAAAAAAGTATACACATAAGTACC
CACACTCACCTTTCGCACACTCTCTCCCCTTTTCAGAAGATGTTTATCCG
TCATAGCACAGTCACGGCCTCGGTCCTCGCGGCCTTGGCCGCTGCTAACG
TCGCGGCGGCCAAGCCCGTCACTTTTGCCAACCCAACTATGAATGTGATC
ACTGCCGTTCAGGAAGGCCCGCTGTCCCCCGGGGAGTGCACGTCTTATGA
GGCGGGGGATGCCAATGCCGTGCTTTGCATGCAGGAGGCTACCCTTACTG
CGCCTGACAATCTCTTGCTCGCCGGCTTCCTCTTTAACAACGGCACGGCC
GAGATCTGCGATCTTAAGCTTGCCCCTGTCAATGCCCCTGGTCTGACGGC
CTTCTGGCCCGACTGGGCCGGCGCGGGGGCCTCGTACGAAAAGTACTTCA
ACCGCGAGCAGATGACAATGGTAGGCTTAACGACCATCCCGAAAAAGGAC
GGCACCATGCCCTCCTTTGAGGTGGTGGGTATGAGGGCCTGTGGCCCTAA
GGAGGGGATGGAGAACAAACTGAAGGGAGAGACGGAGGGCTCCGATGTAT
TGCTGAGCCGGAAGATCCCCTTGGCGGATTCGCCGATGCACCCGCCGGTG
GAGAAGAAGGAGGGGGAGGAGAAGGAGGTGAAGGAAGAGGAGGTCGAGGA
AGAGAAGGAGGCGGAGAAGAAGGAGGGGGAGGAGAAGGAGGGGGAGGAGA
GGGGAGGAGGAGGCGGGGAAGAACTGAGAAGGGTCGCCTTGAGGAAATTA
GGAGGAGGTGGGGAGGATGTCGAACCGGAGGAGGGGGTCGAGCAGCCAGC
TGATTCTTTTTGA back to topprotein sequence of jgi.p|Nanoce1779_2|655891 >mRNA_8482-protein ID=mRNA_8482-protein|Name=jgi.p|Nanoce1779_2|655891|organism=Nannochloropsis oceanica|type=polypeptide|length=258bp
MFIRHSTVTASVLAALAAANVAAAKPVTFANPTMNVITAVQEGPLSPGEC
TSYEAGDANAVLCMQEATLTAPDNLLLAGFLFNNGTAEICDLKLAPVNAP
GLTAFWPDWAGAGASYEKYFNREQMTMVGLTTIPKKDGTMPSFEVVGMRA
CGPKEGMENKLKGETEGSDVLLSRKIPLADSPMHPPVEKKEGEEKEVKEE
EVEEEKEAEKKEGEEKEGEERGGGGGEELRRVALRKLGGGGEDVEPEEGV
EQPADSF* back to topmRNA from alignment at scaffold_24:417461..418608- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8482 ID=mRNA_8482|Name=jgi.p|Nanoce1779_2|655891|organism=Nannochloropsis oceanica|type=mRNA|length=1148bp|location=Sequence derived from alignment at scaffold_24:417461..418608- (Nannochloropsis oceanica)
ACACACACACACACACACACACACACACAAAGGCCAAGTCTTCGCCCCTC
GTCTCCCGTCCTTCTCCGAGCCTGATTCCTCACTCTTACGTGACTTTTAC
CCCGCGCAAGGGAAGGAATCAAGGAGGAAAAAAGTATACACATAAGTACC
CACACTCACCTTTCGCACACTCTCTCCCCTTTTCAGAAGATGTTTATCCG
TCATAGCACAGTCACGGCCTCGGTCCTCGCGGCCTTGGCCGCTGCTAACG
TCGCGGCGGCCAAGCCCGTCACTTTTGCCAACCCAACTATGAATGTGATC
ACTGCCGTTCAGGAAGGCCCGCTGTCCCCCGGGGAGTGCACGTCTTATGA
GGCGGGGGATGCCAATGCCGTGCTTTGCATGCAGGAGGCTACCCTTACTG
CGCCTGACAATCTCTTGGTACGTCTCTCTCTTGTCCGCTTCCCTTTCCCT
CCTTTCGCCCTTCCATGTCTTTCCCCCCCTCCCTCCCCCCTCCCCCCCTT
CCCTTCCTTGCTTCCTTCCATCCTTCCTCTTCCCAGGTGCTCACATTCTC
ACACACCTCCCTCCCTCCCTCCCTCCCTCCCTCCTCCCTCCCTCCCCGGT
AGCTCGCCGGCTTCCTCTTTAACAACGGCACGGCCGAGATCTGCGATCTT
AAGCTTGCCCCTGTCAATGCCCCTGGTCTGACGGCCTTCTGGCCCGACTG
GGCCGGCGCGGGGGCCTCGTACGAAAAGTACTTCAACCGCGAGCAGATGA
CAATGGTAGGCTTAACGACCATCCCGAAAAAGGACGGCACCATGCCCTCC
TTTGAGGTGGTGGGTATGAGGGCCTGTGGCCCTAAGGAGGGGATGGAGAA
CAAACTGAAGGGAGAGACGGAGGGCTCCGATGTATTGCTGAGCCGGAAGA
TCCCCTTGGCGGATTCGCCGATGCACCCGCCGGTGGAGAAGAAGGAGGGG
GAGGAGAAGGAGGTGAAGGAAGAGGAGGTCGAGGAAGAGAAGGAGGCGGA
GAAGAAGGAGGGGGAGGAGAAGGAGGGGGAGGAGAGGGGAGGAGGAGGCG
GGGAAGAACTGAGAAGGGTCGCCTTGAGGAAATTAGGAGGAGGTGGGGAG
GATGTCGAACCGGAGGAGGGGGTCGAGCAGCCAGCTGATTCTTTTTGA back to topCoding sequence (CDS) from alignment at scaffold_24:417461..418608- >mRNA_8482 ID=mRNA_8482|Name=jgi.p|Nanoce1779_2|655891|organism=Nannochloropsis oceanica|type=CDS|length=1548bp|location=Sequence derived from alignment at scaffold_24:417461..418608- (Nannochloropsis oceanica)
CTCGCCGGCTTCCTCTTTAACAACGGCACGGCCGAGATCTGCGATCTTAA
GCTTGCCCCTGTCAATGCCCCTGGTCTGACGGCCTTCTGGCCCGACTGGG
CCGGCGCGGGGGCCTCGTACGAAAAGTACTTCAACCGCGAGCAGATGACA
ATGGTAGGCTTAACGACCATCCCGAAAAAGGACGGCACCATGCCCTCCTT
TGAGGTGGTGGGTATGAGGGCCTGTGGCCCTAAGGAGGGGATGGAGAACA
AACTGAAGGGAGAGACGGAGGGCTCCGATGTATTGCTGAGCCGGAAGATC
CCCTTGGCGGATTCGCCGATGCACCCGCCGGTGGAGAAGAAGGAGGGGGA
GGAGAAGGAGGTGAAGGAAGAGGAGGTCGAGGAAGAGAAGGAGGCGGAGA
AGAAGGAGGGGGAGGAGAAGGAGGGGGAGGAGAGGGGAGGAGGAGGCGGG
GAAGAACTGAGAAGGGTCGCCTTGAGGAAATTAGGAGGAGGTGGGGAGGA
TGTCGAACCGGAGGAGGGGGTCGAGCAGCCAGCTGATTCTTTTTGAATGT
TTATCCGTCATAGCACAGTCACGGCCTCGGTCCTCGCGGCCTTGGCCGCT
GCTAACGTCGCGGCGGCCAAGCCCGTCACTTTTGCCAACCCAACTATGAA
TGTGATCACTGCCGTTCAGGAAGGCCCGCTGTCCCCCGGGGAGTGCACGT
CTTATGAGGCGGGGGATGCCAATGCCGTGCTTTGCATGCAGGAGGCTACC
CTTACTGCGCCTGACAATCTCTTGCTCGCCGGCTTCCTCTTTAACAACGG
CACGGCCGAGATCTGCGATCTTAAGCTTGCCCCTGTCAATGCCCCTGGTC
TGACGGCCTTCTGGCCCGACTGGGCCGGCGCGGGGGCCTCGTACGAAAAG
TACTTCAACCGCGAGCAGATGACAATGGTAGGCTTAACGACCATCCCGAA
AAAGGACGGCACCATGCCCTCCTTTGAGGTGGTGGGTATGAGGGCCTGTG
GCCCTAAGGAGGGGATGGAGAACAAACTGAAGGGAGAGACGGAGGGCTCC
GATGTATTGCTGAGCCGGAAGATCCCCTTGGCGGATTCGCCGATGCACCC
GCCGGTGGAGAAGAAGGAGGGGGAGGAGAAGGAGGTGAAGGAAGAGGAGG
TCGAGGAAGAGAAGGAGGCGGAGAAGAAGGAGGGGGAGGAGAAGGAGGGG
GAGGAGAGGGGAGGAGGAGGCGGGGAAGAACTGAGAAGGGTCGCCTTGAG
GAAATTAGGAGGAGGTGGGGAGGATGTCGAACCGGAGGAGGGGGTCGAGC
AGCCAGCTGATTCTTTTTGAATGTTTATCCGTCATAGCACAGTCACGGCC
TCGGTCCTCGCGGCCTTGGCCGCTGCTAACGTCGCGGCGGCCAAGCCCGT
CACTTTTGCCAACCCAACTATGAATGTGATCACTGCCGTTCAGGAAGGCC
CGCTGTCCCCCGGGGAGTGCACGTCTTATGAGGCGGGGGATGCCAATGCC
GTGCTTTGCATGCAGGAGGCTACCCTTACTGCGCCTGACAATCTCTTG back to top
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