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Properties
| Property Name | Value |
|---|
| TranscriptId | 602300 |
| Track | FilteredModels2 |
| ProteinId | 602214 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_24 | supercontig | scaffold_24:414404..416566 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8481 ID=mRNA_8481|Name=jgi.p|Nanoce1779_2|602214|organism=Nannochloropsis oceanica|type=mRNA|length=1360bp
GCTGCTGCTGCTGCTGCTGCTGCTCCCCCTGCTGCTACAGGTGCTGCAGG
CGCTGATGCTGCTAAACTCGCCGGAGCGTTCACCACCAAAAAGGTGCCGA
TTGAGAACTTGGTCCTGCCGTCGGTTCCTGACCCCGACGTTGAGGATAAA
CGGTCGTTGGCCGTTGAAATCAACCCGGTGGGCAGCATGTATGCGCCAGG
GGGGGCGGACAAGGGTCTCAGGGCCTTCAAGTCCGACTATGACGTGACGC
TTGACCCTAACTATCAGGACGGCGTGGAAGTGACTCCCCTCAACGAAGAC
TACCTCATCTGCAAGAGCTTTGGGAGCCAGCACGACAACACCCTCGAGAT
GACCGTCTGCCTCGAGAATGCGAAGACGTGGCACGAGAAGGGCATCGGCC
GAGTCGTTTCGAGCGACCTCGCCCTTGTCAACACAGGCACCCAAGGCGTC
TGCAACGTCCGCGTGTACATTGAGGGGATGGAAAACGAGCTCGATCACTT
CCCTCAGCTCATCGACGACAACGGCTTCGACACCTACCCTATTTTCTCCG
ACTGGTACGCCCCCGGACGCACCACTCACATGGGCTCTGCCATTCCTAAG
GCGAAGGGTGTCCCTCGCTTTACGGTCTTGAGCGACTTCTATGCCTGTGA
GCAGCCGGATGCCAGCATTGTCCACCGCCGCTTCCGTTGCACCGAATCAA
CGCACAAGCCCAACGGCGCCGTTAAAATTTGCGTTTATACGGATTTGAAG
GAATGGAGGGAGGAGAACGGCGAGCGGGTGGTGGCGGTGGAGGGCTTCCT
CTCCAATACGGGGGAGGCTCCCTTGTGCAATCTGACGGTCGACATTAGCA
ACTTCACGAACGCCCTGGACTACACTGGTGACTGGATGCCGACATACACG
TCCTACCTTGACGAGATGTCGACAGTGAAGTTCTCGGCCAATGTTCCATA
CGTCAAGGGTCGTCCGCGTGTGATGCTCAAGAAATACTCCATCTGCCCGC
ATAAGGTGGTGGCGCCCGTGGAGGAAGCACCAGCCGCAGGCGTCGCAGCA
GCAGAAGCAGGAGCAGCAGCAGAGGTAGCAGCAGAAGCAGGAGCAGCAGA
AGAAGTGGCAGCCGCGCCTGTGGACCCTCCGGCGCTGGACGTTCCTACCA
TTGCCATTGATCCTCCTGTGCGCGGCGAGGAGGAGGCCGTGGCAGAGGTC
GAGGCGGAGATCGAGGAGGAGCCTACGCCGGAGGATGCGGCTGATGCCCC
CCTGGTGGAGACGACCACACGTCGTCTCCGCTCGAAGAAATAATCATTTC
TTGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAAGGCGAGACGACGTAGCT
GTGCCTTGGG back to topprotein sequence of jgi.p|Nanoce1779_2|602214 >mRNA_8481-protein ID=mRNA_8481-protein|Name=jgi.p|Nanoce1779_2|602214|organism=Nannochloropsis oceanica|type=polypeptide|length=369bp
MYAPGGADKGLRAFKSDYDVTLDPNYQDGVEVTPLNEDYLICKSFGSQHD
NTLEMTVCLENAKTWHEKGIGRVVSSDLALVNTGTQGVCNVRVYIEGMEN
ELDHFPQLIDDNGFDTYPIFSDWYAPGRTTHMGSAIPKAKGVPRFTVLSD
FYACEQPDASIVHRRFRCTESTHKPNGAVKICVYTDLKEWREENGERVVA
VEGFLSNTGEAPLCNLTVDISNFTNALDYTGDWMPTYTSYLDEMSTVKFS
ANVPYVKGRPRVMLKKYSICPHKVVAPVEEAPAAGVAAAEAGAAAEVAAE
AGAAEEVAAAPVDPPALDVPTIAIDPPVRGEEEAVAEVEAEIEEEPTPED
AADAPLVETTTRRLRSKK* back to topmRNA from alignment at scaffold_24:414404..416566- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8481 ID=mRNA_8481|Name=jgi.p|Nanoce1779_2|602214|organism=Nannochloropsis oceanica|type=mRNA|length=2163bp|location=Sequence derived from alignment at scaffold_24:414404..416566- (Nannochloropsis oceanica)
GCTGCTGCTGCTGCTGCTGCTGCTCCCCCTGCTGCTACAGGTGCTGCAGG
CGCTGATGCTGCTAAACTCGCCGGAGCGTTCACCACCAAAAAGGTGCCGA
TTGAGAACTTGGTCCTGCCGTCGGTTCCTGACCCCGACGTTGAGGATAAA
CGGTCGTTGGCCGTTGAAATCAACCCGGTGGGCAGCATGTATGCGCCAGG
GGGGGCGGACAAGGGTCTCAGGGCCTTCAAGTCCGACTATGACGTGACGC
TTGACCCTAACTATCAGGTATGGCCGCCCCTCCCTCCCTCTCTCCCTCCC
TCCCTCCCACCCTTCCTCTCCTCCCCCTCAACCCCTCTTCCTTCCCTCTC
TTTCTCCCTCTTGTCTTGAACTTCCCAACCCTTCATGCTACCCTCCCTCC
CTCCCTCCCTCCCTCCCCCCCTCCCTTAGGACGGCGTGGAAGTGACTCCC
CTCAACGAAGACTACCTCATCTGCAAGAGCTTTGGGAGCCAGCACGACAA
CACCCTCGAGATGACCGTCTGCCTCGAGAATGCGAAGACGTGGCACGAGA
AGGGCATCGGCCGAGTCGTTTCGAGCGACCTCGCCCTTGTCAACACAGGC
ACCCAAGGGTAAGTGAGCTGCCTTTCCCTCCTTCCCTCCCTTCCCTCTCT
TCCTCCCTCCCTCCCGCATCTCAATCTCTCTCAATCAAGATCCAGAAATA
CGCGCCGTATCCTCCTGACATCGTCTTCCCTCCCTCCGTCCCTCCCTCCC
TCCCTCTCTCCCTCCCTCCCTCCCCCTCGCCCAGCGTCTGCAACGTCCGC
GTGTACATTGAGGGGATGGAAAACGAGCTCGATCACTTCCCTCAGCTCAT
CGACGACAACGGCTTCGACACCTACCCTATTTTCTCCGACTGGTACGCCC
CCGGACGCACCACTCACATGGGCTCTGCCATTCCTAAGGCGAAGGTAAAT
AAGGACGCAAGAAGCACCCTCCTTCCCTCTTTCCCTTCCTCCCTCCTTCA
TTCCTTCCTTCTTTTCTTCGCTCTCCTTCCCTTTCCCCGTGGTTCCTTTC
TCACACCCACCTCATCTTCTCCTGTCTCATCCTCCCTCCCTCCCTCCCTG
CCTCCCTCCCTCCAGGGTGTCCCTCGCTTTACGGTCTTGAGCGACTTCTA
TGCCTGTGAGCAGCCGGATGCCAGCATTGTCCACCGCCGCTTCCGTTGCA
CCGAATCAACGCACAAGCCCAACGGCGCCGTTAAAATTTGCGTTTATACG
GATTTGAAGGAATGGAGGGAGGAGAACGGCGAGCGGGTGGTGGCGGTGGA
GGGCTTCCTCTCCAATACGGGGGAGGCTCCCTTGTGCAATCTGACGGTCG
ACATTAGGTGGGGAGGGAGGGAGGGAGGGAGGGGGGGAGGGAGGGAGGGA
GGGAGGGACAGAGGGGGTCGCAGCACGTACATAATAGGGATGCCAGCATA
CATTTACACGCACTCCCCTCCCTCCATCTTCCTCCTGCTATCGGTCATCC
CCACACACACCCATGTGACCCCCTCCCCCCAAAATAACACACACACACAC
ACACAAAGCAGTACGACAAACATCCATCCACACACCATTCACACCCACGT
ACGACATACACCCCGCCTCACACACCCCTTTCTCCTTTCTCCCCTCAACA
GCAACTTCACGAACGCCCTGGACTACACTGGTGACTGGATGCCGACATAC
ACGTCCTACCTTGACGAGATGTCGACAGTGAAGTTCTCGGCCAATGTTCC
ATACGTCAAGGGTCGTCCGCGTGTGATGCTCAAGAAATACTCCATCTGCC
CGCATAAGGTGGTGGCGCCCGTGGAGGAAGCACCAGCCGCAGGCGTCGCA
GCAGCAGAAGCAGGAGCAGCAGCAGAGGTAGCAGCAGAAGCAGGAGCAGC
AGAAGAAGTGGCAGCCGCGCCTGTGGACCCTCCGGCGCTGGACGTTCCTA
CCATTGCCATTGATCCTCCTGTGCGCGGCGAGGAGGAGGCCGTGGCAGAG
GTCGAGGCGGAGATCGAGGAGGAGCCTACGCCGGAGGATGCGGCTGATGC
CCCCCTGGTGGAGACGACCACACGTCGTCTCCGCTCGAAGAAATAATCAT
TTCTTGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAAGGCGAGACGACGTA
GCTGTGCCTTGGG back to topCoding sequence (CDS) from alignment at scaffold_24:414404..416566- >mRNA_8481 ID=mRNA_8481|Name=jgi.p|Nanoce1779_2|602214|organism=Nannochloropsis oceanica|type=CDS|length=5535bp|location=Sequence derived from alignment at scaffold_24:414404..416566- (Nannochloropsis oceanica)
CAACTTCACGAACGCCCTGGACTACACTGGTGACTGGATGCCGACATACA
CGTCCTACCTTGACGAGATGTCGACAGTGAAGTTCTCGGCCAATGTTCCA
TACGTCAAGGGTCGTCCGCGTGTGATGCTCAAGAAATACTCCATCTGCCC
GCATAAGGTGGTGGCGCCCGTGGAGGAAGCACCAGCCGCAGGCGTCGCAG
CAGCAGAAGCAGGAGCAGCAGCAGAGGTAGCAGCAGAAGCAGGAGCAGCA
GAAGAAGTGGCAGCCGCGCCTGTGGACCCTCCGGCGCTGGACGTTCCTAC
CATTGCCATTGATCCTCCTGTGCGCGGCGAGGAGGAGGCCGTGGCAGAGG
TCGAGGCGGAGATCGAGGAGGAGCCTACGCCGGAGGATGCGGCTGATGCC
CCCCTGGTGGAGACGACCACACGTCGTCTCCGCTCGAAGAAATAAGGTGT
CCCTCGCTTTACGGTCTTGAGCGACTTCTATGCCTGTGAGCAGCCGGATG
CCAGCATTGTCCACCGCCGCTTCCGTTGCACCGAATCAACGCACAAGCCC
AACGGCGCCGTTAAAATTTGCGTTTATACGGATTTGAAGGAATGGAGGGA
GGAGAACGGCGAGCGGGTGGTGGCGGTGGAGGGCTTCCTCTCCAATACGG
GGGAGGCTCCCTTGTGCAATCTGACGGTCGACATTAGCGTCTGCAACGTC
CGCGTGTACATTGAGGGGATGGAAAACGAGCTCGATCACTTCCCTCAGCT
CATCGACGACAACGGCTTCGACACCTACCCTATTTTCTCCGACTGGTACG
CCCCCGGACGCACCACTCACATGGGCTCTGCCATTCCTAAGGCGAAGGAC
GGCGTGGAAGTGACTCCCCTCAACGAAGACTACCTCATCTGCAAGAGCTT
TGGGAGCCAGCACGACAACACCCTCGAGATGACCGTCTGCCTCGAGAATG
CGAAGACGTGGCACGAGAAGGGCATCGGCCGAGTCGTTTCGAGCGACCTC
GCCCTTGTCAACACAGGCACCCAAGGATGTATGCGCCAGGGGGGGCGGAC
AAGGGTCTCAGGGCCTTCAAGTCCGACTATGACGTGACGCTTGACCCTAA
CTATCAGCAACTTCACGAACGCCCTGGACTACACTGGTGACTGGATGCCG
ACATACACGTCCTACCTTGACGAGATGTCGACAGTGAAGTTCTCGGCCAA
TGTTCCATACGTCAAGGGTCGTCCGCGTGTGATGCTCAAGAAATACTCCA
TCTGCCCGCATAAGGTGGTGGCGCCCGTGGAGGAAGCACCAGCCGCAGGC
GTCGCAGCAGCAGAAGCAGGAGCAGCAGCAGAGGTAGCAGCAGAAGCAGG
AGCAGCAGAAGAAGTGGCAGCCGCGCCTGTGGACCCTCCGGCGCTGGACG
TTCCTACCATTGCCATTGATCCTCCTGTGCGCGGCGAGGAGGAGGCCGTG
GCAGAGGTCGAGGCGGAGATCGAGGAGGAGCCTACGCCGGAGGATGCGGC
TGATGCCCCCCTGGTGGAGACGACCACACGTCGTCTCCGCTCGAAGAAAT
AAGGTGTCCCTCGCTTTACGGTCTTGAGCGACTTCTATGCCTGTGAGCAG
CCGGATGCCAGCATTGTCCACCGCCGCTTCCGTTGCACCGAATCAACGCA
CAAGCCCAACGGCGCCGTTAAAATTTGCGTTTATACGGATTTGAAGGAAT
GGAGGGAGGAGAACGGCGAGCGGGTGGTGGCGGTGGAGGGCTTCCTCTCC
AATACGGGGGAGGCTCCCTTGTGCAATCTGACGGTCGACATTAGCGTCTG
CAACGTCCGCGTGTACATTGAGGGGATGGAAAACGAGCTCGATCACTTCC
CTCAGCTCATCGACGACAACGGCTTCGACACCTACCCTATTTTCTCCGAC
TGGTACGCCCCCGGACGCACCACTCACATGGGCTCTGCCATTCCTAAGGC
GAAGGACGGCGTGGAAGTGACTCCCCTCAACGAAGACTACCTCATCTGCA
AGAGCTTTGGGAGCCAGCACGACAACACCCTCGAGATGACCGTCTGCCTC
GAGAATGCGAAGACGTGGCACGAGAAGGGCATCGGCCGAGTCGTTTCGAG
CGACCTCGCCCTTGTCAACACAGGCACCCAAGGATGTATGCGCCAGGGGG
GGCGGACAAGGGTCTCAGGGCCTTCAAGTCCGACTATGACGTGACGCTTG
ACCCTAACTATCAGCAACTTCACGAACGCCCTGGACTACACTGGTGACTG
GATGCCGACATACACGTCCTACCTTGACGAGATGTCGACAGTGAAGTTCT
CGGCCAATGTTCCATACGTCAAGGGTCGTCCGCGTGTGATGCTCAAGAAA
TACTCCATCTGCCCGCATAAGGTGGTGGCGCCCGTGGAGGAAGCACCAGC
CGCAGGCGTCGCAGCAGCAGAAGCAGGAGCAGCAGCAGAGGTAGCAGCAG
AAGCAGGAGCAGCAGAAGAAGTGGCAGCCGCGCCTGTGGACCCTCCGGCG
CTGGACGTTCCTACCATTGCCATTGATCCTCCTGTGCGCGGCGAGGAGGA
GGCCGTGGCAGAGGTCGAGGCGGAGATCGAGGAGGAGCCTACGCCGGAGG
ATGCGGCTGATGCCCCCCTGGTGGAGACGACCACACGTCGTCTCCGCTCG
AAGAAATAAGGTGTCCCTCGCTTTACGGTCTTGAGCGACTTCTATGCCTG
TGAGCAGCCGGATGCCAGCATTGTCCACCGCCGCTTCCGTTGCACCGAAT
CAACGCACAAGCCCAACGGCGCCGTTAAAATTTGCGTTTATACGGATTTG
AAGGAATGGAGGGAGGAGAACGGCGAGCGGGTGGTGGCGGTGGAGGGCTT
CCTCTCCAATACGGGGGAGGCTCCCTTGTGCAATCTGACGGTCGACATTA
GCGTCTGCAACGTCCGCGTGTACATTGAGGGGATGGAAAACGAGCTCGAT
CACTTCCCTCAGCTCATCGACGACAACGGCTTCGACACCTACCCTATTTT
CTCCGACTGGTACGCCCCCGGACGCACCACTCACATGGGCTCTGCCATTC
CTAAGGCGAAGGACGGCGTGGAAGTGACTCCCCTCAACGAAGACTACCTC
ATCTGCAAGAGCTTTGGGAGCCAGCACGACAACACCCTCGAGATGACCGT
CTGCCTCGAGAATGCGAAGACGTGGCACGAGAAGGGCATCGGCCGAGTCG
TTTCGAGCGACCTCGCCCTTGTCAACACAGGCACCCAAGGATGTATGCGC
CAGGGGGGGCGGACAAGGGTCTCAGGGCCTTCAAGTCCGACTATGACGTG
ACGCTTGACCCTAACTATCAGCAACTTCACGAACGCCCTGGACTACACTG
GTGACTGGATGCCGACATACACGTCCTACCTTGACGAGATGTCGACAGTG
AAGTTCTCGGCCAATGTTCCATACGTCAAGGGTCGTCCGCGTGTGATGCT
CAAGAAATACTCCATCTGCCCGCATAAGGTGGTGGCGCCCGTGGAGGAAG
CACCAGCCGCAGGCGTCGCAGCAGCAGAAGCAGGAGCAGCAGCAGAGGTA
GCAGCAGAAGCAGGAGCAGCAGAAGAAGTGGCAGCCGCGCCTGTGGACCC
TCCGGCGCTGGACGTTCCTACCATTGCCATTGATCCTCCTGTGCGCGGCG
AGGAGGAGGCCGTGGCAGAGGTCGAGGCGGAGATCGAGGAGGAGCCTACG
CCGGAGGATGCGGCTGATGCCCCCCTGGTGGAGACGACCACACGTCGTCT
CCGCTCGAAGAAATAAGGTGTCCCTCGCTTTACGGTCTTGAGCGACTTCT
ATGCCTGTGAGCAGCCGGATGCCAGCATTGTCCACCGCCGCTTCCGTTGC
ACCGAATCAACGCACAAGCCCAACGGCGCCGTTAAAATTTGCGTTTATAC
GGATTTGAAGGAATGGAGGGAGGAGAACGGCGAGCGGGTGGTGGCGGTGG
AGGGCTTCCTCTCCAATACGGGGGAGGCTCCCTTGTGCAATCTGACGGTC
GACATTAGCGTCTGCAACGTCCGCGTGTACATTGAGGGGATGGAAAACGA
GCTCGATCACTTCCCTCAGCTCATCGACGACAACGGCTTCGACACCTACC
CTATTTTCTCCGACTGGTACGCCCCCGGACGCACCACTCACATGGGCTCT
GCCATTCCTAAGGCGAAGGACGGCGTGGAAGTGACTCCCCTCAACGAAGA
CTACCTCATCTGCAAGAGCTTTGGGAGCCAGCACGACAACACCCTCGAGA
TGACCGTCTGCCTCGAGAATGCGAAGACGTGGCACGAGAAGGGCATCGGC
CGAGTCGTTTCGAGCGACCTCGCCCTTGTCAACACAGGCACCCAAGGATG
TATGCGCCAGGGGGGGCGGACAAGGGTCTCAGGGCCTTCAAGTCCGACTA
TGACGTGACGCTTGACCCTAACTATCAGCAACTTCACGAACGCCCTGGAC
TACACTGGTGACTGGATGCCGACATACACGTCCTACCTTGACGAGATGTC
GACAGTGAAGTTCTCGGCCAATGTTCCATACGTCAAGGGTCGTCCGCGTG
TGATGCTCAAGAAATACTCCATCTGCCCGCATAAGGTGGTGGCGCCCGTG
GAGGAAGCACCAGCCGCAGGCGTCGCAGCAGCAGAAGCAGGAGCAGCAGC
AGAGGTAGCAGCAGAAGCAGGAGCAGCAGAAGAAGTGGCAGCCGCGCCTG
TGGACCCTCCGGCGCTGGACGTTCCTACCATTGCCATTGATCCTCCTGTG
CGCGGCGAGGAGGAGGCCGTGGCAGAGGTCGAGGCGGAGATCGAGGAGGA
GCCTACGCCGGAGGATGCGGCTGATGCCCCCCTGGTGGAGACGACCACAC
GTCGTCTCCGCTCGAAGAAATAAGGTGTCCCTCGCTTTACGGTCTTGAGC
GACTTCTATGCCTGTGAGCAGCCGGATGCCAGCATTGTCCACCGCCGCTT
CCGTTGCACCGAATCAACGCACAAGCCCAACGGCGCCGTTAAAATTTGCG
TTTATACGGATTTGAAGGAATGGAGGGAGGAGAACGGCGAGCGGGTGGTG
GCGGTGGAGGGCTTCCTCTCCAATACGGGGGAGGCTCCCTTGTGCAATCT
GACGGTCGACATTAGCGTCTGCAACGTCCGCGTGTACATTGAGGGGATGG
AAAACGAGCTCGATCACTTCCCTCAGCTCATCGACGACAACGGCTTCGAC
ACCTACCCTATTTTCTCCGACTGGTACGCCCCCGGACGCACCACTCACAT
GGGCTCTGCCATTCCTAAGGCGAAGGACGGCGTGGAAGTGACTCCCCTCA
ACGAAGACTACCTCATCTGCAAGAGCTTTGGGAGCCAGCACGACAACACC
CTCGAGATGACCGTCTGCCTCGAGAATGCGAAGACGTGGCACGAGAAGGG
CATCGGCCGAGTCGTTTCGAGCGACCTCGCCCTTGTCAACACAGGCACCC
AAGGATGTATGCGCCAGGGGGGGCGGACAAGGGTCTCAGGGCCTTCAAGT
CCGACTATGACGTGACGCTTGACCCTAACTATCAG back to top
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