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Properties
| Property Name | Value |
|---|
| TranscriptId | 602268 |
| Track | FilteredModels2 |
| ProteinId | 602182 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_24 | supercontig | scaffold_24:389581..391548 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8475 ID=mRNA_8475|Name=jgi.p|Nanoce1779_2|602182|organism=Nannochloropsis oceanica|type=mRNA|length=802bp
GGGCAGCAGCAATTGTTTTGATACGGGGAGGTAAATCCTTGCCACGTTCC
AGAACATATGTCCTTGTTCATTGCCACTCCTGACTCCCCAAACACACACA
TAATCGGTATAACCACCACCATCGCACAGTGAAAACCATGGGGAACTCTC
TTAACCCACTCAAGTCGCCGGAGCCCGTCTATAACGTTATTTGCACGCGT
CCTATTGGCTACGAAGTACGTGTGTACATGCCCTACTTCGTCGCGGAGGT
GGATAATTCCGCTGCTGATAATTCCAACGCTTTCCGGACGCTGGCTAGCT
ACATTGGGGTCTTCAGCAAACCTGCCAACACCCAAAGCAGCACTGGCAAA
CCCCAAGGGATCAGCATGACTGCACCTGTTGTGATGCCTCAGGCACCTTC
ATCCTCCTCTCCGGAGGCCATCTCCATGACGACCCCGGTGGTGCAGAGCG
GCAAAACTATGCAGTTCATCATGCCCTCGTCCTACACCACCTTGTCCTCG
CTTCCAAAACCCACTGACCCCCGCGTTCACCTGAAAGAGGTCCCTGGGAA
AACTGTGGGCGTTATCCGCTACAGCGGCAAGGCCACCAACGTAATGACGC
ACGAGAAGCTCCAGTTGCTCAAGGAAAGACTGCAGCAAGAGACACTGCTG
CCGAAAGAGTGTGAAGAGGTGGACTGGATGTACTGTGGCTACGATCCTCC
CTTCACGCCGGGCCCATTCCGCAGGAACGAGGTGTGGGTTGACTTGAAGA
TGAGCGAGGAAGACGTCAAGGCCAAGCTGGCCGCAGTGGATGGCAAGTAG
GG back to topprotein sequence of jgi.p|Nanoce1779_2|602182 >mRNA_8475-protein ID=mRNA_8475-protein|Name=jgi.p|Nanoce1779_2|602182|organism=Nannochloropsis oceanica|type=polypeptide|length=221bp
MGNSLNPLKSPEPVYNVICTRPIGYEVRVYMPYFVAEVDNSAADNSNAFR
TLASYIGVFSKPANTQSSTGKPQGISMTAPVVMPQAPSSSSPEAISMTTP
VVQSGKTMQFIMPSSYTTLSSLPKPTDPRVHLKEVPGKTVGVIRYSGKAT
NVMTHEKLQLLKERLQQETLLPKECEEVDWMYCGYDPPFTPGPFRRNEVW
VDLKMSEEDVKAKLAAVDGK* back to topmRNA from alignment at scaffold_24:389581..391548- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8475 ID=mRNA_8475|Name=jgi.p|Nanoce1779_2|602182|organism=Nannochloropsis oceanica|type=mRNA|length=1968bp|location=Sequence derived from alignment at scaffold_24:389581..391548- (Nannochloropsis oceanica)
GGGCAGCAGCAATTGTTTTGATACGGGGAGGTAAATCCTTGCCACGTTCC
AGAACATATGTCCTTGTTCATTGCCACTCCTGACTCCCCAAACACACACA
TAATCGGTATAACCACCACCATCGCACAGTGAAAACCATGGGGAACTCTC
TTAACCCACTCAAGTCGCCGGAGCCCGTCTATAACGTTATTTGCACGCGT
CCTATTGGGTGCGTCTCAGTCGGAACATCGAGGAGGCGGGGAGGGGGGTC
GTGAGGGAGGGAGGGGGGAAGGGCTTTACTGCAGGGTAAAGGGTGAAGAA
TATGCATGACCTTGCATCAGGAATGGAAACGACTCTGGCGGGAGATGTAG
TCATGATTGTGATTGTCATCTTCAATTCTCCCCCCACCACACCCACCTTA
TTGACCTCCTCCTCCCTGTCCCCCCTTCCCTCCCTCCCCCCCGTCCTAGC
TACGAAGTACGTGTGTACATGCCCTACTTCGTCGCGGAGGTGGATAATTC
CGCTGCTGATAATTCCAACGCTTTCCGGACGCTGGCTAGCTACATTGGGG
TAAGGAGGGAGGGAGGGAGGGATGGATGGATGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGAGAGGGAGGGAGGGGTGGAGGGAGGGAGG
GCAGGGGTGGAGGGAAAGAGGACAGGGGTGGAGGGAAAGAGGAAGGAAGT
GAAGCTTTGGACGACCGCCTATTAACCCTGCCTCCCTCCCTCTCTCAACC
TCCCTCCCTCTTCCTCCACAGGTCTTCAGCAAACCTGCCAACACCCAAAG
CAGCACTGGCAAACCCCAAGGGATCAGCATGACTGCACCTGTTGTGATGC
CTCAGGCACCTTCATCCTCCTCTCCGGAGGCCATCTCCATGACGACCCCG
GTGGTGCAGAGCGGTAAGCCCTCCCACCCTTCCTCCCTCCCTTCCTCCCT
CCCCTTCACCATCCCCATTCTCAGCGCGCCAAGGCCGCCATTAGTCCCTC
TATATTTACCCCGTACTCCCCTCCCCTCCAATCACTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCCCCCGCAGGCAAAACTATGCAGTTC
ATCATGCCCTCGTCCTACACCACCTTGTCCTCGCTTCCAAAACCCACTGA
CCCCCGCGTTCACCTGAAAGAGGTCCCTGGGAAAACTGTGGGCGTTATCC
GCTACAGGTGCGCCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCAT
CCTTCCTTCCTTTCTCACCATCGTGTCGATTTCGCCATACCCGTCATTCT
GACCGACGCCCGTATCCCTCACCCGCTTCTTAATGCCCTCCTTCCCTCCT
CATCTCATGCCCAGCTCACCAAGCCCGTCATTTCTGACTGACATCGATGC
CTTCCATAGAATACACATATACAACTCAAATGTACTCCTGACTCACATCC
CTCCCTTCCTCCCTCCCTCAGCGGCAAGGCCACCAACGTAATGACGCACG
AGAAGCTCCAGTTGCTCAAGGAAAGACTGCAGCAAGAGACACTGCTGCCG
AAAGAGTGTGAAGAGGTGGACTGGTGAGGGAGGGAGGGAGTGTGGGAACG
GAGAGTTGGAGGGGAGAAGGAGAGTGCTCATTACCGCCTTTTCACGTATG
CTTCTGTCTCATCTTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTTTTTTCCTCGCAGGATGTACTGTGGCTACGATCCTCCCTTCACGCCGG
GCCCATTCCGCAGGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAC
ACTGGCAGTATGCACATTGCATGTACATTTAAATGCATGCTCATGTGTTT
ACCTTAATCCCCCCTTCCTCCTTCCCTCACTCCCTCCTCAGAACGAGGTG
TGGGTTGACTTGAAGATGAGCGAGGAAGACGTCAAGGCCAAGCTGGCCGC
AGTGGATGGCAAGTAGGG back to topCoding sequence (CDS) from alignment at scaffold_24:389581..391548- >mRNA_8475 ID=mRNA_8475|Name=jgi.p|Nanoce1779_2|602182|organism=Nannochloropsis oceanica|type=CDS|length=4641bp|location=Sequence derived from alignment at scaffold_24:389581..391548- (Nannochloropsis oceanica)
AACGAGGTGTGGGTTGACTTGAAGATGAGCGAGGAAGACGTCAAGGCCAA
GCTGGCCGCAGTGGATGGCAAGTAGGATGTACTGTGGCTACGATCCTCCC
TTCACGCCGGGCCCATTCCGCAGGCGGCAAGGCCACCAACGTAATGACGC
ACGAGAAGCTCCAGTTGCTCAAGGAAAGACTGCAGCAAGAGACACTGCTG
CCGAAAGAGTGTGAAGAGGTGGACTGGCAAAACTATGCAGTTCATCATGC
CCTCGTCCTACACCACCTTGTCCTCGCTTCCAAAACCCACTGACCCCCGC
GTTCACCTGAAAGAGGTCCCTGGGAAAACTGTGGGCGTTATCCGCTACAG
GTCTTCAGCAAACCTGCCAACACCCAAAGCAGCACTGGCAAACCCCAAGG
GATCAGCATGACTGCACCTGTTGTGATGCCTCAGGCACCTTCATCCTCCT
CTCCGGAGGCCATCTCCATGACGACCCCGGTGGTGCAGAGCGCTACGAAG
TACGTGTGTACATGCCCTACTTCGTCGCGGAGGTGGATAATTCCGCTGCT
GATAATTCCAACGCTTTCCGGACGCTGGCTAGCTACATTGGGATGGGGAA
CTCTCTTAACCCACTCAAGTCGCCGGAGCCCGTCTATAACGTTATTTGCA
CGCGTCCTATTGGAACGAGGTGTGGGTTGACTTGAAGATGAGCGAGGAAG
ACGTCAAGGCCAAGCTGGCCGCAGTGGATGGCAAGTAGGATGTACTGTGG
CTACGATCCTCCCTTCACGCCGGGCCCATTCCGCAGGCGGCAAGGCCACC
AACGTAATGACGCACGAGAAGCTCCAGTTGCTCAAGGAAAGACTGCAGCA
AGAGACACTGCTGCCGAAAGAGTGTGAAGAGGTGGACTGGCAAAACTATG
CAGTTCATCATGCCCTCGTCCTACACCACCTTGTCCTCGCTTCCAAAACC
CACTGACCCCCGCGTTCACCTGAAAGAGGTCCCTGGGAAAACTGTGGGCG
TTATCCGCTACAGGTCTTCAGCAAACCTGCCAACACCCAAAGCAGCACTG
GCAAACCCCAAGGGATCAGCATGACTGCACCTGTTGTGATGCCTCAGGCA
CCTTCATCCTCCTCTCCGGAGGCCATCTCCATGACGACCCCGGTGGTGCA
GAGCGCTACGAAGTACGTGTGTACATGCCCTACTTCGTCGCGGAGGTGGA
TAATTCCGCTGCTGATAATTCCAACGCTTTCCGGACGCTGGCTAGCTACA
TTGGGATGGGGAACTCTCTTAACCCACTCAAGTCGCCGGAGCCCGTCTAT
AACGTTATTTGCACGCGTCCTATTGGAACGAGGTGTGGGTTGACTTGAAG
ATGAGCGAGGAAGACGTCAAGGCCAAGCTGGCCGCAGTGGATGGCAAGTA
GGATGTACTGTGGCTACGATCCTCCCTTCACGCCGGGCCCATTCCGCAGG
CGGCAAGGCCACCAACGTAATGACGCACGAGAAGCTCCAGTTGCTCAAGG
AAAGACTGCAGCAAGAGACACTGCTGCCGAAAGAGTGTGAAGAGGTGGAC
TGGCAAAACTATGCAGTTCATCATGCCCTCGTCCTACACCACCTTGTCCT
CGCTTCCAAAACCCACTGACCCCCGCGTTCACCTGAAAGAGGTCCCTGGG
AAAACTGTGGGCGTTATCCGCTACAGGTCTTCAGCAAACCTGCCAACACC
CAAAGCAGCACTGGCAAACCCCAAGGGATCAGCATGACTGCACCTGTTGT
GATGCCTCAGGCACCTTCATCCTCCTCTCCGGAGGCCATCTCCATGACGA
CCCCGGTGGTGCAGAGCGCTACGAAGTACGTGTGTACATGCCCTACTTCG
TCGCGGAGGTGGATAATTCCGCTGCTGATAATTCCAACGCTTTCCGGACG
CTGGCTAGCTACATTGGGATGGGGAACTCTCTTAACCCACTCAAGTCGCC
GGAGCCCGTCTATAACGTTATTTGCACGCGTCCTATTGGAACGAGGTGTG
GGTTGACTTGAAGATGAGCGAGGAAGACGTCAAGGCCAAGCTGGCCGCAG
TGGATGGCAAGTAGGATGTACTGTGGCTACGATCCTCCCTTCACGCCGGG
CCCATTCCGCAGGCGGCAAGGCCACCAACGTAATGACGCACGAGAAGCTC
CAGTTGCTCAAGGAAAGACTGCAGCAAGAGACACTGCTGCCGAAAGAGTG
TGAAGAGGTGGACTGGCAAAACTATGCAGTTCATCATGCCCTCGTCCTAC
ACCACCTTGTCCTCGCTTCCAAAACCCACTGACCCCCGCGTTCACCTGAA
AGAGGTCCCTGGGAAAACTGTGGGCGTTATCCGCTACAGGTCTTCAGCAA
ACCTGCCAACACCCAAAGCAGCACTGGCAAACCCCAAGGGATCAGCATGA
CTGCACCTGTTGTGATGCCTCAGGCACCTTCATCCTCCTCTCCGGAGGCC
ATCTCCATGACGACCCCGGTGGTGCAGAGCGCTACGAAGTACGTGTGTAC
ATGCCCTACTTCGTCGCGGAGGTGGATAATTCCGCTGCTGATAATTCCAA
CGCTTTCCGGACGCTGGCTAGCTACATTGGGATGGGGAACTCTCTTAACC
CACTCAAGTCGCCGGAGCCCGTCTATAACGTTATTTGCACGCGTCCTATT
GGAACGAGGTGTGGGTTGACTTGAAGATGAGCGAGGAAGACGTCAAGGCC
AAGCTGGCCGCAGTGGATGGCAAGTAGGATGTACTGTGGCTACGATCCTC
CCTTCACGCCGGGCCCATTCCGCAGGCGGCAAGGCCACCAACGTAATGAC
GCACGAGAAGCTCCAGTTGCTCAAGGAAAGACTGCAGCAAGAGACACTGC
TGCCGAAAGAGTGTGAAGAGGTGGACTGGCAAAACTATGCAGTTCATCAT
GCCCTCGTCCTACACCACCTTGTCCTCGCTTCCAAAACCCACTGACCCCC
GCGTTCACCTGAAAGAGGTCCCTGGGAAAACTGTGGGCGTTATCCGCTAC
AGGTCTTCAGCAAACCTGCCAACACCCAAAGCAGCACTGGCAAACCCCAA
GGGATCAGCATGACTGCACCTGTTGTGATGCCTCAGGCACCTTCATCCTC
CTCTCCGGAGGCCATCTCCATGACGACCCCGGTGGTGCAGAGCGCTACGA
AGTACGTGTGTACATGCCCTACTTCGTCGCGGAGGTGGATAATTCCGCTG
CTGATAATTCCAACGCTTTCCGGACGCTGGCTAGCTACATTGGGATGGGG
AACTCTCTTAACCCACTCAAGTCGCCGGAGCCCGTCTATAACGTTATTTG
CACGCGTCCTATTGGAACGAGGTGTGGGTTGACTTGAAGATGAGCGAGGA
AGACGTCAAGGCCAAGCTGGCCGCAGTGGATGGCAAGTAGGATGTACTGT
GGCTACGATCCTCCCTTCACGCCGGGCCCATTCCGCAGGCGGCAAGGCCA
CCAACGTAATGACGCACGAGAAGCTCCAGTTGCTCAAGGAAAGACTGCAG
CAAGAGACACTGCTGCCGAAAGAGTGTGAAGAGGTGGACTGGCAAAACTA
TGCAGTTCATCATGCCCTCGTCCTACACCACCTTGTCCTCGCTTCCAAAA
CCCACTGACCCCCGCGTTCACCTGAAAGAGGTCCCTGGGAAAACTGTGGG
CGTTATCCGCTACAGGTCTTCAGCAAACCTGCCAACACCCAAAGCAGCAC
TGGCAAACCCCAAGGGATCAGCATGACTGCACCTGTTGTGATGCCTCAGG
CACCTTCATCCTCCTCTCCGGAGGCCATCTCCATGACGACCCCGGTGGTG
CAGAGCGCTACGAAGTACGTGTGTACATGCCCTACTTCGTCGCGGAGGTG
GATAATTCCGCTGCTGATAATTCCAACGCTTTCCGGACGCTGGCTAGCTA
CATTGGGATGGGGAACTCTCTTAACCCACTCAAGTCGCCGGAGCCCGTCT
ATAACGTTATTTGCACGCGTCCTATTGGAACGAGGTGTGGGTTGACTTGA
AGATGAGCGAGGAAGACGTCAAGGCCAAGCTGGCCGCAGTGGATGGCAAG
TAGGATGTACTGTGGCTACGATCCTCCCTTCACGCCGGGCCCATTCCGCA
GGCGGCAAGGCCACCAACGTAATGACGCACGAGAAGCTCCAGTTGCTCAA
GGAAAGACTGCAGCAAGAGACACTGCTGCCGAAAGAGTGTGAAGAGGTGG
ACTGGCAAAACTATGCAGTTCATCATGCCCTCGTCCTACACCACCTTGTC
CTCGCTTCCAAAACCCACTGACCCCCGCGTTCACCTGAAAGAGGTCCCTG
GGAAAACTGTGGGCGTTATCCGCTACAGGTCTTCAGCAAACCTGCCAACA
CCCAAAGCAGCACTGGCAAACCCCAAGGGATCAGCATGACTGCACCTGTT
GTGATGCCTCAGGCACCTTCATCCTCCTCTCCGGAGGCCATCTCCATGAC
GACCCCGGTGGTGCAGAGCGCTACGAAGTACGTGTGTACATGCCCTACTT
CGTCGCGGAGGTGGATAATTCCGCTGCTGATAATTCCAACGCTTTCCGGA
CGCTGGCTAGCTACATTGGGATGGGGAACTCTCTTAACCCACTCAAGTCG
CCGGAGCCCGTCTATAACGTTATTTGCACGCGTCCTATTGG back to top
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