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Properties
| Property Name | Value |
|---|
| TranscriptId | 197561 |
| Track | FilteredModels2 |
| ProteinId | 197475 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_24 | supercontig | scaffold_24:356075..357358 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8467 ID=mRNA_8467|Name=jgi.p|Nanoce1779_2|197475|organism=Nannochloropsis oceanica|type=mRNA|length=1137bp
GCGGCCGAGGGAGTAGTGAGGAGGAGGACGAGGAGGACGAGGAGGACGAG
GAAGAAGACGAGAGGTCGGTGTCCTCTGACTCCGACATCGAGGAGGAAGA
GGAGAGGGGAGGGATAAAGGAGAAAAGGGAAAAAGGAGAAGGAGAAGAAG
AAGAAGAGGGAAGGACAAAGAGCAGGGATGTGAAGGTGCTGGAGGACTGT
CTTAGGGACGATTTTCGACGATGGATGATGAAAGAGACCCTCGGAAATAG
CCGACCTATTGCCGAGGCAACGGCCCAGGAGCATGTGATGAGTATGAACA
ATCTCCTTCGGCGAGTCTTGGCTAGGATGAGGGGGAGGGAGGGGGGGGGG
AGGAGGTCGAGGAACGGGGTTGGACCGTCCGTGCCTGCCGGAGGGAGGGA
GGAGGGGGGAAAGGGTGTTATGTCCTCGTATTCCCTTGGCGAGAAAGAGG
AGGCGATGAAAGTGTTGAGAACGAAGAGGGGGAGGCAGGCCTTAAGGGAG
GAAGGGTCAAAATTGACCTATGGGAGAGTGACGGCGTTCAAGTACTTTTG
CAAGTACATGGGAATGGAGGAGGAGGAGGAGGGAGGAAGGGAGGGAGGGA
GGGATGATGCGCCTCTTTGTGATCCTCCCCCTCCTCCTCCTTCACCGTCG
GCAAGCGGAGGAGAAGGAGGGAGGGGATGTTTGACAGGCTTGGTGTTGCT
TCAGAAGGAGGTGAAGAGAGGTTTCAAGAAATGGTTGATGCGCCGAGGAG
GAGGGCATGGGGGAGGGCGAGAAGTAGGGAAGGAAACGGCGGATGGATAC
TTGACCGTTTCGCTGTACATCTTACACCAGACATTTAATCGGGCTAGGCC
ACGGAGAGCCCCCACAGCCATGGGTCCTTGTGAGGCGCTCTCGTTCATCA
CCACTCATCACTGCCTAGTGTCCCACCTCCTGGCAACGGCCTCATCTCCT
CGTTTCCCTCCCCAAGTCGTGCAGACCGCCTGGCGACAGTTTGTGAAGTA
CCTGAAGGTGGGGAAGGAGGGAGGCAGAGAGAGAGGGAGAGGTGGGCTGG
ATGTGTGAATAATAAGGTATGCCTTGTCTCCTTCCATCGTATCCTTATCT
TGATCCCTCCTTGTCCTTCTCTGAAAAAGTCGCATCC back to topprotein sequence of jgi.p|Nanoce1779_2|197475 >mRNA_8467-protein ID=mRNA_8467-protein|Name=jgi.p|Nanoce1779_2|197475|organism=Nannochloropsis oceanica|type=polypeptide|length=278bp
MMKETLGNSRPIAEATAQEHVMSMNNLLRRVLARMRGREGGGRRSRNGVG
PSVPAGGREEGGKGVMSSYSLGEKEEAMKVLRTKRGRQALREEGSKLTYG
RVTAFKYFCKYMGMEEEEEGGREGGRDDAPLCDPPPPPPSPSASGGEGGR
GCLTGLVLLQKEVKRGFKKWLMRRGGGHGGGREVGKETADGYLTVSLYIL
HQTFNRARPRRAPTAMGPCEALSFITTHHCLVSHLLATASSPRFPPQVVQ
TAWRQFVKYLKVGKEGGRERGRGGLDV* back to topmRNA from alignment at scaffold_24:356075..357358+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8467 ID=mRNA_8467|Name=jgi.p|Nanoce1779_2|197475|organism=Nannochloropsis oceanica|type=mRNA|length=1284bp|location=Sequence derived from alignment at scaffold_24:356075..357358+ (Nannochloropsis oceanica)
GCGGCCGAGGGAGTAGTGAGGAGGAGGACGAGGAGGACGAGGAGGACGAG
GAAGAAGACGAGAGGTCGGTGTCCTCTGACTCCGACATCGAGGAGGAAGA
GGAGAGGGGAGGGATAAAGGAGAAAAGGGAAAAAGGAGAAGGAGAAGAAG
AAGAAGAGGGAAGGACAAAGAGCAGGGATGTGAAGGTGCTGGAGGACTGT
CTTAGGGACGATTTTCGACGATGGATGATGAAAGAGACCCTCGGAAATAG
CCGACCTATTGCCGAGGCAACGGCCCAGGAGCATGTGATGAGTATGAACA
ATCTCCTTCGGCGAGTCTTGGCTAGGATGAGGGGGAGGGAGGGGGGGGGG
AGGAGGTCGAGGAACGGGGTTGGACCGTCCGTGCCTGCCGGAGGGAGGGA
GGAGGGGGGAAAGGGTGTTATGTCCTCGTATTCCCTTGGCGAGAAAGAGG
AGGCGATGAAAGTGTTGAGAACGAAGAGGGGGAGGCAGGCCTTAAGGGAG
GAAGGGTCAAAATTGACCTATGGGAGAGTGACGGCGTTCAAGTACTTTTG
CAAGTACATGGGAATGGAGGAGGAGGAGGAGGGAGGAAGGGAGGGAGGGA
GGGATGATGCGCCTCTTTGTGATCCTCCCCCTCCTCCTCCTTCACCGTCG
GCAAGCGGAGGAGAAGGAGGGAGGGGATGTTTGACAGGCTTGGTGTTGCT
TCAGAAGGAGGTGAAGAGAGGTTTCAAGAAATGGTTGATGCGCCGAGGAG
GAGGGCATGGGGGAGGGCGAGAAGTAGGGAAGGAAACGGCGGATGGATAC
TTGACCGTTTCGCTGTACATCTTACACCAGACATTTAATCGGGCTAGGCC
ACGGAGAGGTAGGGACGGAAAGAGGGAGGGAGGGAGGGAGGTAGAGGAGG
GAGGATCTCTCCCGAAATGGTCCTCATTTTCCGCCGGTATGTCCTTACCC
CTCGCTCCCTCTCTCTTCCTCCCTCCCTCCCTCCCTCCTTTCTCCCTCCC
TCCAGCCCCCACAGCCATGGGTCCTTGTGAGGCGCTCTCGTTCATCACCA
CTCATCACTGCCTAGTGTCCCACCTCCTGGCAACGGCCTCATCTCCTCGT
TTCCCTCCCCAAGTCGTGCAGACCGCCTGGCGACAGTTTGTGAAGTACCT
GAAGGTGGGGAAGGAGGGAGGCAGAGAGAGAGGGAGAGGTGGGCTGGATG
TGTGAATAATAAGGTATGCCTTGTCTCCTTCCATCGTATCCTTATCTTGA
TCCCTCCTTGTCCTTCTCTGAAAAAGTCGCATCC back to topCoding sequence (CDS) from alignment at scaffold_24:356075..357358+ >mRNA_8467 ID=mRNA_8467|Name=jgi.p|Nanoce1779_2|197475|organism=Nannochloropsis oceanica|type=CDS|length=1668bp|location=Sequence derived from alignment at scaffold_24:356075..357358+ (Nannochloropsis oceanica)
ATGATGAAAGAGACCCTCGGAAATAGCCGACCTATTGCCGAGGCAACGGC
CCAGGAGCATGTGATGAGTATGAACAATCTCCTTCGGCGAGTCTTGGCTA
GGATGAGGGGGAGGGAGGGGGGGGGGAGGAGGTCGAGGAACGGGGTTGGA
CCGTCCGTGCCTGCCGGAGGGAGGGAGGAGGGGGGAAAGGGTGTTATGTC
CTCGTATTCCCTTGGCGAGAAAGAGGAGGCGATGAAAGTGTTGAGAACGA
AGAGGGGGAGGCAGGCCTTAAGGGAGGAAGGGTCAAAATTGACCTATGGG
AGAGTGACGGCGTTCAAGTACTTTTGCAAGTACATGGGAATGGAGGAGGA
GGAGGAGGGAGGAAGGGAGGGAGGGAGGGATGATGCGCCTCTTTGTGATC
CTCCCCCTCCTCCTCCTTCACCGTCGGCAAGCGGAGGAGAAGGAGGGAGG
GGATGTTTGACAGGCTTGGTGTTGCTTCAGAAGGAGGTGAAGAGAGGTTT
CAAGAAATGGTTGATGCGCCGAGGAGGAGGGCATGGGGGAGGGCGAGAAG
TAGGGAAGGAAACGGCGGATGGATACTTGACCGTTTCGCTGTACATCTTA
CACCAGACATTTAATCGGGCTAGGCCACGGAGAGCCCCCACAGCCATGGG
TCCTTGTGAGGCGCTCTCGTTCATCACCACTCATCACTGCCTAGTGTCCC
ACCTCCTGGCAACGGCCTCATCTCCTCGTTTCCCTCCCCAAGTCGTGCAG
ACCGCCTGGCGACAGTTTGTGAAGTACCTGAAGGTGGGGAAGGAGGGAGG
CAGAGAGAGAGGGAGAGGTGGGCTGGATGTGTGAATGATGAAAGAGACCC
TCGGAAATAGCCGACCTATTGCCGAGGCAACGGCCCAGGAGCATGTGATG
AGTATGAACAATCTCCTTCGGCGAGTCTTGGCTAGGATGAGGGGGAGGGA
GGGGGGGGGGAGGAGGTCGAGGAACGGGGTTGGACCGTCCGTGCCTGCCG
GAGGGAGGGAGGAGGGGGGAAAGGGTGTTATGTCCTCGTATTCCCTTGGC
GAGAAAGAGGAGGCGATGAAAGTGTTGAGAACGAAGAGGGGGAGGCAGGC
CTTAAGGGAGGAAGGGTCAAAATTGACCTATGGGAGAGTGACGGCGTTCA
AGTACTTTTGCAAGTACATGGGAATGGAGGAGGAGGAGGAGGGAGGAAGG
GAGGGAGGGAGGGATGATGCGCCTCTTTGTGATCCTCCCCCTCCTCCTCC
TTCACCGTCGGCAAGCGGAGGAGAAGGAGGGAGGGGATGTTTGACAGGCT
TGGTGTTGCTTCAGAAGGAGGTGAAGAGAGGTTTCAAGAAATGGTTGATG
CGCCGAGGAGGAGGGCATGGGGGAGGGCGAGAAGTAGGGAAGGAAACGGC
GGATGGATACTTGACCGTTTCGCTGTACATCTTACACCAGACATTTAATC
GGGCTAGGCCACGGAGAGCCCCCACAGCCATGGGTCCTTGTGAGGCGCTC
TCGTTCATCACCACTCATCACTGCCTAGTGTCCCACCTCCTGGCAACGGC
CTCATCTCCTCGTTTCCCTCCCCAAGTCGTGCAGACCGCCTGGCGACAGT
TTGTGAAGTACCTGAAGGTGGGGAAGGAGGGAGGCAGAGAGAGAGGGAGA
GGTGGGCTGGATGTGTGA back to top
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