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Properties
| Property Name | Value |
|---|
| TranscriptId | 602208 |
| Track | FilteredModels2 |
| ProteinId | 602122 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_24 | supercontig | scaffold_24:335536..336892 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8458 ID=mRNA_8458|Name=jgi.p|Nanoce1779_2|602122|organism=Nannochloropsis oceanica|type=mRNA|length=1031bp
ACAGAAGCACTTGTTGACCTGCCTGCCGGCCAGCTCCAGCTCCGCTCCCT
CCTCTCAGCCTTCCCGACCATGGCTGCCTCTGCTGGAGCCGCTGCAGCCA
TTGTCGGCAAACGCGCCTCGAGTCCAGGCAACAAAGCCTTGTTTCGGGGC
ATTGTTTTTTCGACTCTTGCTGTGGCGACAGGCGATTATATTTGCCAGCA
ACTCGAAGGAGAGGATGAGGACGGGAGGGAGGGCGAGGTCCTGCTTGGAC
AAGAACAGCTCCAGCTACCACAGCACCAGCAACCACAAATAAGAGCAACT
CCAATATCAACAACCAAAAAAGAATGGGACAAGGAAAGGACATTGAGAAT
GGCAGCAGCAACGGCAGTAGTGATGGCTCCAACGTCGTGGATGATCGTTA
TGCGACTAGAAAAGTTTTTCCCAGGTAATTCGACTGCGGCAGTTCTGAAG
AAAACGTTGGCCAACGGGTGCCTGGCTCCCTTCATGATCTCCCTCCATTT
TTCCACCATCACCGCCTTGGAAAATCATCCGGATGCCCGCGTTCACCTCG
AGCAACGGATGAGCCACAACTTGCTTCCTACCCTAGCGAGTGGGGTGGTG
TTTTGGCCCTTTGTCAATATATTAAATTTCATGTTTGTGAGACTGGAAAA
CCGACCGGTGGTGGGAGCGATGGCGGGGGTGGCCTGGTCCATCTACATGA
GTAAGCAGGTGAATGGAAAGGTGAAGGAAGGGGGGAAAGAGGGAGGATTG
AGAAACACCACCTAGCTCGGAGTGTCTGCCGGTCGTGGGAGGAGCCACGG
TGTGTGCGGTGCCGGCATGGTTTATGTGATCGGTCGTTTTTGTGGGCAGA
TGGATTGTCAATAGGAAGGGGAAATGATGTCGACGACAACGCTTTTCAGT
AAAGCTGTGAGTTGATGGGGAAGATAAATGGGAAGAAAGTGCTGAATAGG
GTAGGGAATACGTGCGAAAAGAGACAGTTTTAGAAAGAGGGAGCGCGACG
GAGTGAGGGAGAGAAAGTGTGTGTGAGAGGG back to topprotein sequence of jgi.p|Nanoce1779_2|602122 >mRNA_8458-protein ID=mRNA_8458-protein|Name=jgi.p|Nanoce1779_2|602122|organism=Nannochloropsis oceanica|type=polypeptide|length=232bp
MAASAGAAAAIVGKRASSPGNKALFRGIVFSTLAVATGDYICQQLEGEDE
DGREGEVLLGQEQLQLPQHQQPQIRATPISTTKKEWDKERTLRMAAATAV
VMAPTSWMIVMRLEKFFPGNSTAAVLKKTLANGCLAPFMISLHFSTITAL
ENHPDARVHLEQRMSHNLLPTLASGVVFWPFVNILNFMFVRLENRPVVGA
MAGVAWSIYMSKQVNGKVKEGGKEGGLRNTT* back to topmRNA from alignment at scaffold_24:335536..336892- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8458 ID=mRNA_8458|Name=jgi.p|Nanoce1779_2|602122|organism=Nannochloropsis oceanica|type=mRNA|length=1357bp|location=Sequence derived from alignment at scaffold_24:335536..336892- (Nannochloropsis oceanica)
ACAGAAGCACTTGTTGACCTGCCTGCCGGCCAGCTCCAGCTCCGCTCCCT
CCTCTCAGCCTTCCCGACCATGGCTGCCTCTGCTGGAGCCGCTGCAGCCA
TTGTCGGCAAACGCGCCTCGAGTCCAGGCAACAAAGCCTTGTTTCGGGGC
ATTGTTTTTTCGACTCTTGCTGTGGCGACAGGCGATTATATTTGCCAGCA
ACTCGAAGGAGAGGATGAGGACGGGAGGGAGGGCGAGGTCCTGCTTGGAC
AAGAACAGCTCCAGCTACCACAGCACCAGCAACCACAAATAAGAGCAACT
CCAATATCAACAACCAAAAAAGAATGGGACAAGGAAAGGACATTGAGAAT
GGCAGCAGCAACGGCAGTAGTGATGGCTCCAACGTCGTGGATGATCGTTA
TGCGACTAGAAAAGTTTTTCCCAGGTAGGTCTTGAGGGATTGCTGTAGGG
ATGGAGGGAGGTAGGGTTGGATCGGACGTTTTGTGTTATAGCGCATCCCA
TAAGATTCCTTACAGATGGATCGTGAGGGAGTGAGGGAGGGAAGGCAAGA
GGGGGGGAATGAAGGCGATATGGTAAAGCTCACCAAAACTCCAACCATTT
CCAATTCCATAGCCGCGGTCGTGAAGAAAACACTGCGCCGACGGTCGCCT
GGCTCCTTTACGATTTCTCACCCTCCATTCTCCACCATCAGTTTCTGACA
TAGCCTCAAAATATCTCCCTCCTTCCCTCCTGCTCTTCAATCCCCCTCAG
GTAATTCGACTGCGGCAGTTCTGAAGAAAACGTTGGCCAACGGGTGCCTG
GCTCCCTTCATGATCTCCCTCCATTTTTCCACCATCACCGCCTTGGAAAA
TCATCCGGATGCCCGCGTTCACCTCGAGCAACGGATGAGCCACAACTTGC
TTCCTACCCTAGCGAGTGGGGTGGTGTTTTGGCCCTTTGTCAATATATTA
AATTTCATGTTTGTGAGACTGGAAAACCGACCGGTGGTGGGAGCGATGGC
GGGGGTGGCCTGGTCCATCTACATGAGTAAGCAGGTGAATGGAAAGGTGA
AGGAAGGGGGGAAAGAGGGAGGATTGAGAAACACCACCTAGCTCGGAGTG
TCTGCCGGTCGTGGGAGGAGCCACGGTGTGTGCGGTGCCGGCATGGTTTA
TGTGATCGGTCGTTTTTGTGGGCAGATGGATTGTCAATAGGAAGGGGAAA
TGATGTCGACGACAACGCTTTTCAGTAAAGCTGTGAGTTGATGGGGAAGA
TAAATGGGAAGAAAGTGCTGAATAGGGTAGGGAATACGTGCGAAAAGAGA
CAGTTTTAGAAAGAGGGAGCGCGACGGAGTGAGGGAGAGAAAGTGTGTGT
GAGAGGG back to topCoding sequence (CDS) from alignment at scaffold_24:335536..336892- >mRNA_8458 ID=mRNA_8458|Name=jgi.p|Nanoce1779_2|602122|organism=Nannochloropsis oceanica|type=CDS|length=1392bp|location=Sequence derived from alignment at scaffold_24:335536..336892- (Nannochloropsis oceanica)
GTAATTCGACTGCGGCAGTTCTGAAGAAAACGTTGGCCAACGGGTGCCTG
GCTCCCTTCATGATCTCCCTCCATTTTTCCACCATCACCGCCTTGGAAAA
TCATCCGGATGCCCGCGTTCACCTCGAGCAACGGATGAGCCACAACTTGC
TTCCTACCCTAGCGAGTGGGGTGGTGTTTTGGCCCTTTGTCAATATATTA
AATTTCATGTTTGTGAGACTGGAAAACCGACCGGTGGTGGGAGCGATGGC
GGGGGTGGCCTGGTCCATCTACATGAGTAAGCAGGTGAATGGAAAGGTGA
AGGAAGGGGGGAAAGAGGGAGGATTGAGAAACACCACCTAGATGGCTGCC
TCTGCTGGAGCCGCTGCAGCCATTGTCGGCAAACGCGCCTCGAGTCCAGG
CAACAAAGCCTTGTTTCGGGGCATTGTTTTTTCGACTCTTGCTGTGGCGA
CAGGCGATTATATTTGCCAGCAACTCGAAGGAGAGGATGAGGACGGGAGG
GAGGGCGAGGTCCTGCTTGGACAAGAACAGCTCCAGCTACCACAGCACCA
GCAACCACAAATAAGAGCAACTCCAATATCAACAACCAAAAAAGAATGGG
ACAAGGAAAGGACATTGAGAATGGCAGCAGCAACGGCAGTAGTGATGGCT
CCAACGTCGTGGATGATCGTTATGCGACTAGAAAAGTTTTTCCCAGGTAA
TTCGACTGCGGCAGTTCTGAAGAAAACGTTGGCCAACGGGTGCCTGGCTC
CCTTCATGATCTCCCTCCATTTTTCCACCATCACCGCCTTGGAAAATCAT
CCGGATGCCCGCGTTCACCTCGAGCAACGGATGAGCCACAACTTGCTTCC
TACCCTAGCGAGTGGGGTGGTGTTTTGGCCCTTTGTCAATATATTAAATT
TCATGTTTGTGAGACTGGAAAACCGACCGGTGGTGGGAGCGATGGCGGGG
GTGGCCTGGTCCATCTACATGAGTAAGCAGGTGAATGGAAAGGTGAAGGA
AGGGGGGAAAGAGGGAGGATTGAGAAACACCACCTAGATGGCTGCCTCTG
CTGGAGCCGCTGCAGCCATTGTCGGCAAACGCGCCTCGAGTCCAGGCAAC
AAAGCCTTGTTTCGGGGCATTGTTTTTTCGACTCTTGCTGTGGCGACAGG
CGATTATATTTGCCAGCAACTCGAAGGAGAGGATGAGGACGGGAGGGAGG
GCGAGGTCCTGCTTGGACAAGAACAGCTCCAGCTACCACAGCACCAGCAA
CCACAAATAAGAGCAACTCCAATATCAACAACCAAAAAAGAATGGGACAA
GGAAAGGACATTGAGAATGGCAGCAGCAACGGCAGTAGTGATGGCTCCAA
CGTCGTGGATGATCGTTATGCGACTAGAAAAGTTTTTCCCAG back to top
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