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Properties
| Property Name | Value |
|---|
| TranscriptId | 626289 |
| Track | FilteredModels2 |
| ProteinId | 626203 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_24 | supercontig | scaffold_24:330265..332654 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8456 ID=mRNA_8456|Name=jgi.p|Nanoce1779_2|626203|organism=Nannochloropsis oceanica|type=mRNA|length=1584bp
CGCGGGTTCGGCGAATTTTGATTGCCGTTTGAAGCTGTGGCCTCCGCTAG
AGGTCATGCCCCAGCCACACGTGGATAGCGAATGAGACAGACCACCTGCC
TCAGCCCCTTCCCCACTACACTCTCGACAATGGAAGATATGTGAGAATCG
CATAGTAGGTATTCATAGACATCTGTTGCCTGAACTCATTTCTTCTCACC
CTTCATCATCCTCCTGCCCTCAGATCGGAGCCGCTTTGTTGTTTCCCCTT
ATCCTCCTCCCTCCAGCTGTACCATCACCAGCACAATGCTGCGTGCCGTC
ATCGCCGCCACCACCTCATCCCTCCTCCTGCTTGCCCTCCTTGCCACCAG
CAGCCCATCCACCACACAAGCCTTCCTCCTCCCCTCCCTCTCCACCTCCC
CCTTCCCCTCCCCCCTCCGCCTCCGCGCCCGTGCCTTGTCCATGGCCGTG
GGCGCCAAGAGCGAGTACTCCATCACCCTCCTTCCCGGTGATGGCATCGG
CCCCGAAATTATGACCGCCACGGTGGGCGTTCTCGATGAAGTAGCGAAGA
AGGGTGGGTTTAAGCTTCAATTCCAAGAAGCCCTGATTGGTGGCGCGGCC
CTGGACGCGAAAGACGACCCATTTCCCGATGCATCTCTCCAGGCCTGCCA
GTCTGCGGACTCCGTTCTGCTTGCCTGCATTGGTGGCTACAAGTGGGATA
AAAATCCCAGGGACAAACGCCCGGAAACGGGCTTGCTTAAGATGAGGAAA
ACGATGGGGCTTTTCGCAAATTTGCGGCCAGCCAAGGTTCTACCGCAGTT
GGTGTCAGCCTCGACGCTCAAGCCGGAGGTGGTCTCGGGGGTGGACATCA
TGGTGGTGCGTGAACTGACGGGCGACGTATACTTTGGCACGCCCAAAGGG
ATCGTGAACCTTGAGAATGGCGAGCGGGAAGGGTTCAACAACATGGTTTA
TAAGGAGAGTGAGATCCGGCGGATCGCCAAGGTCGCATACGGCGTGGCGG
AGAAGCGAACGAAGAAACTCTGTTCAGTCGACAAGGCAAATGTCCTGGAC
GTGTCCCAGCTATGGCGCGAGGTCGTGACGGAGGAAGGCCAGCAGCACCC
CTCCGTCGAGCTCTCGCACATGTACGTGGATAACGCCGCCATGCAGCTCA
TACGGTGGCCGAAGCAGTTCGACACCATCGTCTGCGGGAACCTTTTCGGC
GACATCCTGTCCGACGAAGCCTCCATGCTCGTGGGCTCCCTGGGCATGTT
GCCGTCAGCCTCCCTCGGCGAGCCCTCCGGGCCGGGTGTCTTCGAACCGT
GCCATGGCTCCGCACCTGATATTGCCGGGCAAGACAAGGCCAACCCCCTG
GCGATGATTTTGTCGGCGGCGATGATGCTGCGGTACGACTTGAGCCAGCC
GGCAGCGGCGGATGCGCTGGAAGCCGCTGTTGAGAAAGTGCTTGGTAAGT
GCAGGAGGACGGGGGAGGGAAGCTTGGCGGGTGTGGACGGTATGACGCTG
GTAGGATGTAAGAGGATGGGAGAAGAAGTCAAGAAGGCAGTGGTGGCAAT
GATATTAAATGTATCGAATGCTGCTGAAGTTTGA back to topprotein sequence of jgi.p|Nanoce1779_2|626203 >mRNA_8456-protein ID=mRNA_8456-protein|Name=jgi.p|Nanoce1779_2|626203|organism=Nannochloropsis oceanica|type=polypeptide|length=433bp
MLRAVIAATTSSLLLLALLATSSPSTTQAFLLPSLSTSPFPSPLRLRARA
LSMAVGAKSEYSITLLPGDGIGPEIMTATVGVLDEVAKKGGFKLQFQEAL
IGGAALDAKDDPFPDASLQACQSADSVLLACIGGYKWDKNPRDKRPETGL
LKMRKTMGLFANLRPAKVLPQLVSASTLKPEVVSGVDIMVVRELTGDVYF
GTPKGIVNLENGEREGFNNMVYKESEIRRIAKVAYGVAEKRTKKLCSVDK
ANVLDVSQLWREVVTEEGQQHPSVELSHMYVDNAAMQLIRWPKQFDTIVC
GNLFGDILSDEASMLVGSLGMLPSASLGEPSGPGVFEPCHGSAPDIAGQD
KANPLAMILSAAMMLRYDLSQPAAADALEAAVEKVLGKCRRTGEGSLAGV
DGMTLVGCKRMGEEVKKAVVAMILNVSNAAEV* back to topmRNA from alignment at scaffold_24:330265..332654- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8456 ID=mRNA_8456|Name=jgi.p|Nanoce1779_2|626203|organism=Nannochloropsis oceanica|type=mRNA|length=2390bp|location=Sequence derived from alignment at scaffold_24:330265..332654- (Nannochloropsis oceanica)
CGCGGGTTCGGCGAATTTTGATTGCCGTTTGAAGCTGTGGCCTCCGCTAG
AGGTCATGCCCCAGCCACACGTGGATAGCGAATGAGACAGACCACCTGCC
TCAGCCCCTTCCCCACTACACTCTCGACAATGGAAGATATGTGAGAATCG
CATAGTAGGTATTCATAGACATCTGTTGCCTGAACTCATTTCTTCTCACC
CTTCATCATCCTCCTGCCCTCAGATCGGAGCCGCTTTGTTGTTTCCCCTT
ATCCTCCTCCCTCCAGCTGTACCATCACCAGCACAATGCTGCGTGCCGTC
ATCGCCGCCACCACCTCATCCCTCCTCCTGCTTGCCCTCCTTGCCACCAG
CAGCCCATCCACCACACAAGCCTTCCTCCTCCCCTCCCTCTCCACCTCCC
CCTTCCCCTCCCCCCTCCGCCTCCGCGCCCGTGCCTTGTCCATGGCCGTG
GGCGCCAAGAGCGAGTACTCCATCACCCTCCTTCCCGGTGATGGCATCGG
CCCCGAAATTATGACCGCCACGGTGGGCGTTCTCGATGAAGTAGCGAAGA
AGGGTGGGTTTAAGCTTCAATTCCAAGAAGCCCTGATTGGTGGCGCGGCC
CTGGACGCGAAAGACGACCCATTTCCCGATGCATCTCTCCAGGCCTGCCA
GTCTGCGGACTCCGTTCTGCTTGCCTGCATTGGTGGCTACAAGTGGGATA
AAAATCCCAGGGACAAACGCCCGGAAACGGGCTTGCTTAAGATGAGGAAA
ACGATGGGGCTTTTCGCAAATTTGCGGCCAGCCAAGGTTCTACCGCAGTT
GGTGTCAGCCTCGACGCTCAAGCCGGAGGTGGTCTCGGGGGTGGACATCA
TGGTGGTGCGTGAACTGACGGGCGACGTATACTTTGGCACGCCCAAAGGG
ATCGTGAACCTTGAGAATGGCGAGCGGGAAGGGTTCAACAACATGGTTTA
TAAGGAGAGTGAGATCCGGCGGATCGCCAAGGTCGCATACGGCGTGGCGG
AGAAGCGAACGAAGAAACTCTGTTCAGTCGACAAGGCAAATGTCCTGGAC
GTGTCCCAGCTATGGCGCGAGGTCGTGACGGAGGAAGGCCAGCAGCACCC
CTCCGTCGAGCTCTCGCACATGTACGTGGATAACGCCGCCATGCAGCTCA
TACGGTGGCCGAAGCAGTTCGACACCATCGTCTGCGGGAACCTTTTCGGC
GACATCCTGTCCGACGAAGCCTCCATGCTCGTGGGCTCCCTGGGCATGTT
GCCGTCAGCCTCCCTCGGCGAGCCCTCCGGGCCGGGTGTCTTCGAACCGT
GCCATGGCTCCGCACCTGATATTGCCGGGCAAGACAAGGCCAACCCCCTG
GCGATGATTTTGTCGGCGGCGATGATGCTGCGGTACGACTTGAGCCAGCC
GGCAGCGGCGGATGCGCTGGAAGCCGCTGTTGAGAAAGTGCTTGGTAAGT
GCAGGAGGACGGGGGAGGGAAGCTTGGCGGGTGTGGTATGTTTTGATAGA
GTTCGATTAAGCGAACATCTGGGCAATCACTTTTTCATGCCATTTCGTCT
CATCCTCCCTTACTTCCTCCCTATCAAAATTTTCCAGATCTGGGTTTCCG
CACACCCGATATTCAACAGGACGGTATGACGCTGGTAGGATGTAAGAGGA
TGGGAGAAGAAGTCAAGAAGGCAGTGGTGGCAATGATGTAATGCGAGGGG
GGAGGAAGCGATAGGTGAAGAGAAAGAGGCAAATCAGTCTAGAGGTTCCT
GGATAAGTGAACGAGAGTGAGGGGATGGGCTTGGGGTTGGGGGGCGATGA
GAAGGAAGGGGAGAAGATAAATTGAGGGAGAAGCAGTGGGATGCCTCACT
AGAACAAAAGAAGAAAGAAAACGAACACTTGGTACGTACGTGCGCAGAAT
TTAGCGCGGTGATTCTACTTCGAATGCCGCTGGCGGGCATGGCCTCCTTA
ATTTCACCTGCTATTTCTTTCGGGCATGGACTCCTTAGTTTCATCTGCTA
TTTCTTTTCGAGATGATCGGCACATGAAATGGCAGAGGAGAGCACCTTGG
AAGCCGATTCCCCCCTCCCCCCCTCAAGCCCTGTAAACTATGGTGCTTCT
GTCCTTTACTGCCTGTCATCGCACACCAGCATTTAAAAACACTATGTCCG
CTGAGTATAAAAAGACAATTTTATTTACTGTATCCTTGGTCTTATTGATT
ACTTGACCGATTACGTACAAAACAATTGCGGTAAAATATACTCTCAACCT
CCCCCAACGCGAACGGCCCAAGCCTCAGTACGCGATCGCACTAAAGAGAC
TATCGTTTTTAATTCTACACACCCTATACTGTCAGCTCGTCTTCAAATTG
TCCGTACAGATTAAATGTATCGAATGCTGCTGAAGTTTGA back to topCoding sequence (CDS) from alignment at scaffold_24:330265..332654- >mRNA_8456 ID=mRNA_8456|Name=jgi.p|Nanoce1779_2|626203|organism=Nannochloropsis oceanica|type=CDS|length=3897bp|location=Sequence derived from alignment at scaffold_24:330265..332654- (Nannochloropsis oceanica)
ATTAAATGTATCGAATGCTGCTGAAGTTTGAGACGGTATGACGCTGGTAG
GATGTAAGAGGATGGGAGAAGAAGTCAAGAAGGCAGTGGTGGCAATGATA
TGCTGCGTGCCGTCATCGCCGCCACCACCTCATCCCTCCTCCTGCTTGCC
CTCCTTGCCACCAGCAGCCCATCCACCACACAAGCCTTCCTCCTCCCCTC
CCTCTCCACCTCCCCCTTCCCCTCCCCCCTCCGCCTCCGCGCCCGTGCCT
TGTCCATGGCCGTGGGCGCCAAGAGCGAGTACTCCATCACCCTCCTTCCC
GGTGATGGCATCGGCCCCGAAATTATGACCGCCACGGTGGGCGTTCTCGA
TGAAGTAGCGAAGAAGGGTGGGTTTAAGCTTCAATTCCAAGAAGCCCTGA
TTGGTGGCGCGGCCCTGGACGCGAAAGACGACCCATTTCCCGATGCATCT
CTCCAGGCCTGCCAGTCTGCGGACTCCGTTCTGCTTGCCTGCATTGGTGG
CTACAAGTGGGATAAAAATCCCAGGGACAAACGCCCGGAAACGGGCTTGC
TTAAGATGAGGAAAACGATGGGGCTTTTCGCAAATTTGCGGCCAGCCAAG
GTTCTACCGCAGTTGGTGTCAGCCTCGACGCTCAAGCCGGAGGTGGTCTC
GGGGGTGGACATCATGGTGGTGCGTGAACTGACGGGCGACGTATACTTTG
GCACGCCCAAAGGGATCGTGAACCTTGAGAATGGCGAGCGGGAAGGGTTC
AACAACATGGTTTATAAGGAGAGTGAGATCCGGCGGATCGCCAAGGTCGC
ATACGGCGTGGCGGAGAAGCGAACGAAGAAACTCTGTTCAGTCGACAAGG
CAAATGTCCTGGACGTGTCCCAGCTATGGCGCGAGGTCGTGACGGAGGAA
GGCCAGCAGCACCCCTCCGTCGAGCTCTCGCACATGTACGTGGATAACGC
CGCCATGCAGCTCATACGGTGGCCGAAGCAGTTCGACACCATCGTCTGCG
GGAACCTTTTCGGCGACATCCTGTCCGACGAAGCCTCCATGCTCGTGGGC
TCCCTGGGCATGTTGCCGTCAGCCTCCCTCGGCGAGCCCTCCGGGCCGGG
TGTCTTCGAACCGTGCCATGGCTCCGCACCTGATATTGCCGGGCAAGACA
AGGCCAACCCCCTGGCGATGATTTTGTCGGCGGCGATGATGCTGCGGTAC
GACTTGAGCCAGCCGGCAGCGGCGGATGCGCTGGAAGCCGCTGTTGAGAA
AGTGCTTGGTAAGTGCAGGAGGACGGGGGAGGGAAGCTTGGCGGGTGTGA
TTAAATGTATCGAATGCTGCTGAAGTTTGAGACGGTATGACGCTGGTAGG
ATGTAAGAGGATGGGAGAAGAAGTCAAGAAGGCAGTGGTGGCAATGATAT
GCTGCGTGCCGTCATCGCCGCCACCACCTCATCCCTCCTCCTGCTTGCCC
TCCTTGCCACCAGCAGCCCATCCACCACACAAGCCTTCCTCCTCCCCTCC
CTCTCCACCTCCCCCTTCCCCTCCCCCCTCCGCCTCCGCGCCCGTGCCTT
GTCCATGGCCGTGGGCGCCAAGAGCGAGTACTCCATCACCCTCCTTCCCG
GTGATGGCATCGGCCCCGAAATTATGACCGCCACGGTGGGCGTTCTCGAT
GAAGTAGCGAAGAAGGGTGGGTTTAAGCTTCAATTCCAAGAAGCCCTGAT
TGGTGGCGCGGCCCTGGACGCGAAAGACGACCCATTTCCCGATGCATCTC
TCCAGGCCTGCCAGTCTGCGGACTCCGTTCTGCTTGCCTGCATTGGTGGC
TACAAGTGGGATAAAAATCCCAGGGACAAACGCCCGGAAACGGGCTTGCT
TAAGATGAGGAAAACGATGGGGCTTTTCGCAAATTTGCGGCCAGCCAAGG
TTCTACCGCAGTTGGTGTCAGCCTCGACGCTCAAGCCGGAGGTGGTCTCG
GGGGTGGACATCATGGTGGTGCGTGAACTGACGGGCGACGTATACTTTGG
CACGCCCAAAGGGATCGTGAACCTTGAGAATGGCGAGCGGGAAGGGTTCA
ACAACATGGTTTATAAGGAGAGTGAGATCCGGCGGATCGCCAAGGTCGCA
TACGGCGTGGCGGAGAAGCGAACGAAGAAACTCTGTTCAGTCGACAAGGC
AAATGTCCTGGACGTGTCCCAGCTATGGCGCGAGGTCGTGACGGAGGAAG
GCCAGCAGCACCCCTCCGTCGAGCTCTCGCACATGTACGTGGATAACGCC
GCCATGCAGCTCATACGGTGGCCGAAGCAGTTCGACACCATCGTCTGCGG
GAACCTTTTCGGCGACATCCTGTCCGACGAAGCCTCCATGCTCGTGGGCT
CCCTGGGCATGTTGCCGTCAGCCTCCCTCGGCGAGCCCTCCGGGCCGGGT
GTCTTCGAACCGTGCCATGGCTCCGCACCTGATATTGCCGGGCAAGACAA
GGCCAACCCCCTGGCGATGATTTTGTCGGCGGCGATGATGCTGCGGTACG
ACTTGAGCCAGCCGGCAGCGGCGGATGCGCTGGAAGCCGCTGTTGAGAAA
GTGCTTGGTAAGTGCAGGAGGACGGGGGAGGGAAGCTTGGCGGGTGTGAT
TAAATGTATCGAATGCTGCTGAAGTTTGAGACGGTATGACGCTGGTAGGA
TGTAAGAGGATGGGAGAAGAAGTCAAGAAGGCAGTGGTGGCAATGATATG
CTGCGTGCCGTCATCGCCGCCACCACCTCATCCCTCCTCCTGCTTGCCCT
CCTTGCCACCAGCAGCCCATCCACCACACAAGCCTTCCTCCTCCCCTCCC
TCTCCACCTCCCCCTTCCCCTCCCCCCTCCGCCTCCGCGCCCGTGCCTTG
TCCATGGCCGTGGGCGCCAAGAGCGAGTACTCCATCACCCTCCTTCCCGG
TGATGGCATCGGCCCCGAAATTATGACCGCCACGGTGGGCGTTCTCGATG
AAGTAGCGAAGAAGGGTGGGTTTAAGCTTCAATTCCAAGAAGCCCTGATT
GGTGGCGCGGCCCTGGACGCGAAAGACGACCCATTTCCCGATGCATCTCT
CCAGGCCTGCCAGTCTGCGGACTCCGTTCTGCTTGCCTGCATTGGTGGCT
ACAAGTGGGATAAAAATCCCAGGGACAAACGCCCGGAAACGGGCTTGCTT
AAGATGAGGAAAACGATGGGGCTTTTCGCAAATTTGCGGCCAGCCAAGGT
TCTACCGCAGTTGGTGTCAGCCTCGACGCTCAAGCCGGAGGTGGTCTCGG
GGGTGGACATCATGGTGGTGCGTGAACTGACGGGCGACGTATACTTTGGC
ACGCCCAAAGGGATCGTGAACCTTGAGAATGGCGAGCGGGAAGGGTTCAA
CAACATGGTTTATAAGGAGAGTGAGATCCGGCGGATCGCCAAGGTCGCAT
ACGGCGTGGCGGAGAAGCGAACGAAGAAACTCTGTTCAGTCGACAAGGCA
AATGTCCTGGACGTGTCCCAGCTATGGCGCGAGGTCGTGACGGAGGAAGG
CCAGCAGCACCCCTCCGTCGAGCTCTCGCACATGTACGTGGATAACGCCG
CCATGCAGCTCATACGGTGGCCGAAGCAGTTCGACACCATCGTCTGCGGG
AACCTTTTCGGCGACATCCTGTCCGACGAAGCCTCCATGCTCGTGGGCTC
CCTGGGCATGTTGCCGTCAGCCTCCCTCGGCGAGCCCTCCGGGCCGGGTG
TCTTCGAACCGTGCCATGGCTCCGCACCTGATATTGCCGGGCAAGACAAG
GCCAACCCCCTGGCGATGATTTTGTCGGCGGCGATGATGCTGCGGTACGA
CTTGAGCCAGCCGGCAGCGGCGGATGCGCTGGAAGCCGCTGTTGAGAAAG
TGCTTGGTAAGTGCAGGAGGACGGGGGAGGGAAGCTTGGCGGGTGTG back to top
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