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Properties
| Property Name | Value |
| TranscriptId | 602163 |
| Track | FilteredModels2 |
| ProteinId | 602077 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_24 | supercontig | scaffold_24:306693..309327 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8448 ID=mRNA_8448|Name=jgi.p|Nanoce1779_2|602077|organism=Nannochloropsis oceanica|type=mRNA|length=2550bp AACAGAAAGGAAGGAGAAAGAGCGGGCGTCTCTGCTCTCTGCTATTGCCA GCCACTTTGGTTTGTCGCAGTAGGTCTGTACGGGCCCGGCAAGGCACACT CTCCTCTCCACCGCCCTTCACAATCATGGACGGCGAGGCCACGACCAAGC CCGCAAGTAGCAGTACTAGCAGCGGCAAGAGGAAGTCTCCTCCCACCGTC GAAGCCTGGGTGACGCAACAAAAAGCCGCCCTCCTAGAAGAACGGGAAGA AGAAAAGCAAGAGGTCACGGCGGCCCTCGCGCAACTCACCCCTCAAGAAT GTCAGGAAAAAGGCGTCTCCCTCCTCTACCTCAACATCATCGGGACCAGC ACGGGCCTTTACGGACGCACCTGTATCAGCCTAGGTCCCTCCATAGCCCT AAGAAAAGACGGAAAGCTACCTGCACATGGCTTTAGCAGCGGAGATGAGG TAGTACTCCGGTCGATGAAAGGCAGCAGTACCAGTAGCAAGAGCAGCACC GGCAATTTAAGCAACAGCGGCAAGAGCAGCAGCAGTTTTATTAACGGTGG AGGAGAAATATCAGGCGTAGTCACCAGGATCACGGCCAGCAAACTCGAGT TTGTGGCCTCCGCGGACGAGGTAGACGAGGAACTCCTCGAAAGCTGGGCA GCCGCTGGCCCGGGGAGTGGACACCTCCGTCTGGACATGCTGGCAAACGA GGCCACGCACCAGAAAATGATGAAAGCCATCGACATCCTCCTTGCCTACC CCTCCGATGGGCCTGCTGCTCGCCTGGTCAATATGTGCTTTGGAAGTCGG GCTTCTCTCTGCTCCCTTCCTTCGCCCCATGTCACCTCGCACACCCTCCC CTCCTCCGGCACCCGCTGGCTGTCCGGTGCTGAGTTAAACGAAGACCAAC GCGCCGCGATCGCCATAGGACTAGCGACGGACGATGTCGCCCTCATTCAT GGTCCTCCAGGAACAGGGAAGACCACGGCAGTGGTGGAATTGATCCTACA GGCTGTGCATCGGCACAAGAGGAGACTCTTGGTCTGTGCGCCCTCGAATG TGGCAGTCGATAACATGGTGGAACGCATTGCAGCTGCCACTTCTCAGAGC AGTAGTAGTAGTAGTAGTAGTAGTGGTAGCAGCAGCAGAGCCTCGTCCTC TCTTTACTCGTCTTCATTCAAGCCCCCCCGCATTGTCCGCCTCGGCCATC CCGCCCGTCTATCGCCCGCAACCCTCGCCTACTCCCTTGAAGCCCTCATC GCCACCGCAGACGGGACCAGCATCGTCTCGGACATTCGTGCCGAGATCTC TGCCTTAGAGAGGAAAAAATTCAGCTCTCGAGGCTTCAGGCTCAAGCAAG AAAAGAGTGCGTGGCGCCAAGAAATGCGTGGACTGAAAAAAGAGATGCGG GTGCGAGAGGAAGGGGTGGTGAGGGACGTGCTCAAGAGTCGGGACATTGT GCTGTGTACGTGCGTGGGGGCAGCGACTAGGTTGCTAACAGAAGAGACGT TTGATATGGTGGTGATAGATGAGGCCGCGCAGAGCCTGGAAGCGGCCTGC TGGATCCCGATGCTGAAGGGAAGTAGGGTGGTGCTCGCGGGGGATCACAA GCAGTTGCCACCGACGATCAAGAGTCGGAAGGCGGATAAGATGGGCTTGG CCGTGACGTTGTTCGACCGACTTATGCATTTAGATGAAGCGTTCTGGACC CCTTCTTCCTTGATTCCTTCTCTTCCTCCCCCTCCCTCCCCCTCTTCTTC TTCTCTCCCCTCTTCGCCTAAGGCCAGCCAAGGGATGAAGAAGGAGAAGA AGAGGGAGGGAGGGAGGACGAGAATGTTGACGGTGCAGTATCGAATGCAC GCGAATATTTGCGGATGGGCGAGCAAAGCCATGTATGCTGGCTTACTGGT CCCCGATGCGTCGGTGGCAAGCAGAACACTGGCAGGCCTGTCGGAGGGAG GGAAGGAGAGTGAACCAAATGACAAGGAGAGGGAGGAGAGGAAGAAGGAG CAGGAAGAGGAGAAGGAAGGGAGGGATGCGCAGGAGCAGGACATGACAAA AGCTGTCCTCCTCTTCCTCGACACTGCTGGATGCGGCATGGACGAAGAGG AAGGAGAGCGGGAAAAGGACAAAGACACTCCTCCTCCCGTTCCAATGAAG GTGAGGCTCTGGTCGTCTCCGCGCACGTGCACGCGCTCGTAAGAGACACG AATGTAACCCCCGAAGAAATAGCCATTATCACCCCATACAACGCGCAAGT GGAGCTCCTTCGCTCCCTCCTACACCCAATCTTTCCGTCTCTCGAAATTC GGTCCGTGGATGGCTTCCAGGGCGGGGAGAGGGAGGCGGTGGTGTTAAGC TTGGTGAGGAGTAATGGGAGGGGTGAGGTGGGGTTTTTGAAAGAGGATCG GCGGTTGAATGTGGCTGTTACACGAGCGAAGAGACATGTGTGTGTGGTGG GAGATAGTGAGACCGTGGGGAGACACCCTTTTTTGAAAGGCTTGTTGGAG TGGATAGAGGAGAAAGGGGAGATGAGGAGTGCGCTTGAGTATGTGCCTGA back to topprotein sequence of jgi.p|Nanoce1779_2|602077 >mRNA_8448-protein ID=mRNA_8448-protein|Name=jgi.p|Nanoce1779_2|602077|organism=Nannochloropsis oceanica|type=polypeptide|length=689bp MDGEATTKPASSSTSSGKRKSPPTVEAWVTQQKAALLEEREEEKQEVTAA LAQLTPQECQEKGVSLLYLNIIGTSTGLYGRTCISLGPSIALRKDGKLPA HGFSSGDEVVLRSMKGSSTSSKSSTGNLSNSGKSSSSFINGGGEISGVVT RITASKLEFVASADEVDEELLESWAAAGPGSGHLRLDMLANEATHQKMMK AIDILLAYPSDGPAARLVNMCFGSRASLCSLPSPHVTSHTLPSSGTRWLS GAELNEDQRAAIAIGLATDDVALIHGPPGTGKTTAVVELILQAVHRHKRR LLVCAPSNVAVDNMVERIAAATSQSSSSSSSSSGSSSRASSSLYSSSFKP PRIVRLGHPARLSPATLAYSLEALIATADGTSIVSDIRAEISALERKKFS SRGFRLKQEKSAWRQEMRGLKKEMRVREEGVVRDVLKSRDIVLCTCVGAA TRLLTEETFDMVVIDEAAQSLEAACWIPMLKGSRVVLAGDHKQLPPTIKS RKADKMGLAVTLFDRLMHLDEAFWTPSSLIPSLPPPPSPSSSSLPSSPKA SQGMKKEKKREGGRTRMLTVQYRMHANICGWASKAMYAGLLVPDASVASR TLAGLSEGGKESEPNDKEREERKKEQEEEKEGRDAQEQDMTKAVLLFLDT AGCGMDEEEGEREKDKDTPPPVPMKVRLWSSPRTCTRS* back to topmRNA from alignment at scaffold_24:306693..309327+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8448 ID=mRNA_8448|Name=jgi.p|Nanoce1779_2|602077|organism=Nannochloropsis oceanica|type=mRNA|length=2635bp|location=Sequence derived from alignment at scaffold_24:306693..309327+ (Nannochloropsis oceanica) AACAGAAAGGAAGGAGAAAGAGCGGGCGTCTCTGCTCTCTGCTATTGCCA
GCCACTTTGGTTTGTCGCAGTAGGTCTGTACGGGCCCGGCAAGGCACACT
CTCCTCTCCACCGCCCTTCACAATCATGGACGGCGAGGCCACGACCAAGC
CCGCAAGTAGCAGTACTAGCAGCGGCAAGAGGAAGTCTCCTCCCACCGTC
GAAGCCTGGGTGACGCAACAAAAAGCCGCCCTCCTAGAAGAACGGGAAGA
AGAAAAGCAAGAGGTCACGGCGGCCCTCGCGCAACTCACCCCTCAAGAAT
GTCAGGAAAAAGGCGTCTCCCTCCTCTACCTCAACATCATCGGGACCAGC
ACGGGCCTTTACGGACGCACCTGTATCAGCCTAGGTCCCTCCATAGCCCT
AAGAAAAGACGGAAAGCTACCTGCACATGGCTTTAGCAGCGGAGATGAGG
TAGTACTCCGGTCGATGAAAGGCAGCAGTACCAGTAGCAAGAGCAGCACC
GGCAATTTAAGCAACAGCGGCAAGAGCAGCAGCAGTTTTATTAACGGTGG
AGGAGAAATATCAGGCGTAGTCACCAGGATCACGGCCAGCAAACTCGAGT
TTGTGGCCTCCGCGGACGAGGTAGACGAGGAACTCCTCGAAAGCTGGGCA
GCCGCTGGCCCGGGGAGTGGACACCTCCGTCTGGACATGCTGGCAAACGA
GGCCACGCACCAGAAAATGATGAAAGCCATCGACATCCTCCTTGCCTACC
CCTCCGATGGGCCTGCTGCTCGCCTGGTCAATATGTGCTTTGGAAGTCGG
GCTTCTCTCTGCTCCCTTCCTTCGCCCCATGTCACCTCGCACACCCTCCC
CTCCTCCGGCACCCGCTGGCTGTCCGGTGCTGAGTTAAACGAAGACCAAC
GCGCCGCGATCGCCATAGGACTAGCGACGGACGATGTCGCCCTCATTCAT
GGTCCTCCAGGAACAGGGAAGACCACGGCAGTGGTGGAATTGATCCTACA
GGCTGTGCATCGGCACAAGAGGAGACTCTTGGTCTGTGCGCCCTCGAATG
TGGCAGTCGATAACATGGTGGAACGCATTGCAGCTGCCACTTCTCAGAGC
AGTAGTAGTAGTAGTAGTAGTAGTGGTAGCAGCAGCAGAGCCTCGTCCTC
TCTTTACTCGTCTTCATTCAAGCCCCCCCGCATTGTCCGCCTCGGCCATC
CCGCCCGTCTATCGCCCGCAACCCTCGCCTACTCCCTTGAAGCCCTCATC
GCCACCGCAGACGGGACCAGCATCGTCTCGGACATTCGTGCCGAGATCTC
TGCCTTAGAGAGGAAAAAATTCAGCTCTCGAGGCTTCAGGCTCAAGCAAG
AAAAGAGTGCGTGGCGCCAAGAAATGCGTGGACTGAAAAAAGAGATGCGG
GTGCGAGAGGAAGGGGTGGTGAGGGACGTGCTCAAGAGTCGGGACATTGT
GCTGTGTACGTGCGTGGGGGCAGCGACTAGGTTGCTAACAGAAGAGACGT
TTGATATGGTGGTGATAGATGAGGCCGCGCAGAGCCTGGAAGCGGCCTGC
TGGATCCCGATGCTGAAGGGAAGTAGGGTGGTGCTCGCGGGGGATCACAA
GCAGTTGCCACCGACGATCAAGAGTCGGAAGGCGGATAAGATGGGCTTGG
CCGTGACGTTGTTCGACCGACTTATGCATTTAGATGAAGCGTTCTGGACC
CCTTCTTCCTTGATTCCTTCTCTTCCTCCCCCTCCCTCCCCCTCTTCTTC
TTCTCTCCCCTCTTCGCCTAAGGCCAGCCAAGGGATGAAGAAGGAGAAGA
AGAGGGAGGGAGGGAGGACGAGAATGTTGACGGTGCAGTATCGAATGCAC
GCGAATATTTGCGGATGGGCGAGCAAAGCCATGTATGCTGGCTTACTGGT
CCCCGATGCGTCGGTGGCAAGCAGAACACTGGCAGGCCTGTCGGAGGGAG
GGAAGGAGAGTGAACCAAATGACAAGGAGAGGGAGGAGAGGAAGAAGGAG
CAGGAAGAGGAGAAGGAAGGGAGGGATGCGCAGGAGCAGGACATGACAAA
AGCTGTCCTCCTCTTCCTCGACACTGCTGGATGCGGCATGGACGAAGAGG
AAGGAGAGCGGGAAAAGGACAAAGACACTCCTCCTTCCCTGCCTTCCTCC
TCCCCCTCCTCCCCCTCCTCCCACTCCTCCCAAAGGAAGACCATCCGCCC
CCGCTCCCTCCTCTCCTCCTCCCGTTCCAATGAAGGTGAGGCTCTGGTCG
TCTCCGCGCACGTGCACGCGCTCGTAAGAGACACGAATGTAACCCCCGAA
GAAATAGCCATTATCACCCCATACAACGCGCAAGTGGAGCTCCTTCGCTC
CCTCCTACACCCAATCTTTCCGTCTCTCGAAATTCGGTCCGTGGATGGCT
TCCAGGGCGGGGAGAGGGAGGCGGTGGTGTTAAGCTTGGTGAGGAGTAAT
GGGAGGGGTGAGGTGGGGTTTTTGAAAGAGGATCGGCGGTTGAATGTGGC
TGTTACACGAGCGAAGAGACATGTGTGTGTGGTGGGAGATAGTGAGACCG
TGGGGAGACACCCTTTTTTGAAAGGCTTGTTGGAGTGGATAGAGGAGAAA
GGGGAGATGAGGAGTGCGCTTGAGTATGTGCCTGA back to topCoding sequence (CDS) from alignment at scaffold_24:306693..309327+ >mRNA_8448 ID=mRNA_8448|Name=jgi.p|Nanoce1779_2|602077|organism=Nannochloropsis oceanica|type=CDS|length=4134bp|location=Sequence derived from alignment at scaffold_24:306693..309327+ (Nannochloropsis oceanica) ATGGACGGCGAGGCCACGACCAAGCCCGCAAGTAGCAGTACTAGCAGCGG CAAGAGGAAGTCTCCTCCCACCGTCGAAGCCTGGGTGACGCAACAAAAAG CCGCCCTCCTAGAAGAACGGGAAGAAGAAAAGCAAGAGGTCACGGCGGCC CTCGCGCAACTCACCCCTCAAGAATGTCAGGAAAAAGGCGTCTCCCTCCT CTACCTCAACATCATCGGGACCAGCACGGGCCTTTACGGACGCACCTGTA TCAGCCTAGGTCCCTCCATAGCCCTAAGAAAAGACGGAAAGCTACCTGCA CATGGCTTTAGCAGCGGAGATGAGGTAGTACTCCGGTCGATGAAAGGCAG CAGTACCAGTAGCAAGAGCAGCACCGGCAATTTAAGCAACAGCGGCAAGA GCAGCAGCAGTTTTATTAACGGTGGAGGAGAAATATCAGGCGTAGTCACC AGGATCACGGCCAGCAAACTCGAGTTTGTGGCCTCCGCGGACGAGGTAGA CGAGGAACTCCTCGAAAGCTGGGCAGCCGCTGGCCCGGGGAGTGGACACC TCCGTCTGGACATGCTGGCAAACGAGGCCACGCACCAGAAAATGATGAAA GCCATCGACATCCTCCTTGCCTACCCCTCCGATGGGCCTGCTGCTCGCCT GGTCAATATGTGCTTTGGAAGTCGGGCTTCTCTCTGCTCCCTTCCTTCGC CCCATGTCACCTCGCACACCCTCCCCTCCTCCGGCACCCGCTGGCTGTCC GGTGCTGAGTTAAACGAAGACCAACGCGCCGCGATCGCCATAGGACTAGC GACGGACGATGTCGCCCTCATTCATGGTCCTCCAGGAACAGGGAAGACCA CGGCAGTGGTGGAATTGATCCTACAGGCTGTGCATCGGCACAAGAGGAGA CTCTTGGTCTGTGCGCCCTCGAATGTGGCAGTCGATAACATGGTGGAACG CATTGCAGCTGCCACTTCTCAGAGCAGTAGTAGTAGTAGTAGTAGTAGTG GTAGCAGCAGCAGAGCCTCGTCCTCTCTTTACTCGTCTTCATTCAAGCCC CCCCGCATTGTCCGCCTCGGCCATCCCGCCCGTCTATCGCCCGCAACCCT CGCCTACTCCCTTGAAGCCCTCATCGCCACCGCAGACGGGACCAGCATCG TCTCGGACATTCGTGCCGAGATCTCTGCCTTAGAGAGGAAAAAATTCAGC TCTCGAGGCTTCAGGCTCAAGCAAGAAAAGAGTGCGTGGCGCCAAGAAAT GCGTGGACTGAAAAAAGAGATGCGGGTGCGAGAGGAAGGGGTGGTGAGGG ACGTGCTCAAGAGTCGGGACATTGTGCTGTGTACGTGCGTGGGGGCAGCG ACTAGGTTGCTAACAGAAGAGACGTTTGATATGGTGGTGATAGATGAGGC CGCGCAGAGCCTGGAAGCGGCCTGCTGGATCCCGATGCTGAAGGGAAGTA GGGTGGTGCTCGCGGGGGATCACAAGCAGTTGCCACCGACGATCAAGAGT CGGAAGGCGGATAAGATGGGCTTGGCCGTGACGTTGTTCGACCGACTTAT GCATTTAGATGAAGCGTTCTGGACCCCTTCTTCCTTGATTCCTTCTCTTC CTCCCCCTCCCTCCCCCTCTTCTTCTTCTCTCCCCTCTTCGCCTAAGGCC AGCCAAGGGATGAAGAAGGAGAAGAAGAGGGAGGGAGGGAGGACGAGAAT GTTGACGGTGCAGTATCGAATGCACGCGAATATTTGCGGATGGGCGAGCA AAGCCATGTATGCTGGCTTACTGGTCCCCGATGCGTCGGTGGCAAGCAGA ACACTGGCAGGCCTGTCGGAGGGAGGGAAGGAGAGTGAACCAAATGACAA GGAGAGGGAGGAGAGGAAGAAGGAGCAGGAAGAGGAGAAGGAAGGGAGGG ATGCGCAGGAGCAGGACATGACAAAAGCTGTCCTCCTCTTCCTCGACACT GCTGGATGCGGCATGGACGAAGAGGAAGGAGAGCGGGAAAAGGACAAAGA CACTCCTCCTCCCGTTCCAATGAAGGTGAGGCTCTGGTCGTCTCCGCGCA CGTGCACGCGCTCGTAAATGGACGGCGAGGCCACGACCAAGCCCGCAAGT AGCAGTACTAGCAGCGGCAAGAGGAAGTCTCCTCCCACCGTCGAAGCCTG GGTGACGCAACAAAAAGCCGCCCTCCTAGAAGAACGGGAAGAAGAAAAGC AAGAGGTCACGGCGGCCCTCGCGCAACTCACCCCTCAAGAATGTCAGGAA AAAGGCGTCTCCCTCCTCTACCTCAACATCATCGGGACCAGCACGGGCCT TTACGGACGCACCTGTATCAGCCTAGGTCCCTCCATAGCCCTAAGAAAAG ACGGAAAGCTACCTGCACATGGCTTTAGCAGCGGAGATGAGGTAGTACTC CGGTCGATGAAAGGCAGCAGTACCAGTAGCAAGAGCAGCACCGGCAATTT AAGCAACAGCGGCAAGAGCAGCAGCAGTTTTATTAACGGTGGAGGAGAAA TATCAGGCGTAGTCACCAGGATCACGGCCAGCAAACTCGAGTTTGTGGCC TCCGCGGACGAGGTAGACGAGGAACTCCTCGAAAGCTGGGCAGCCGCTGG CCCGGGGAGTGGACACCTCCGTCTGGACATGCTGGCAAACGAGGCCACGC ACCAGAAAATGATGAAAGCCATCGACATCCTCCTTGCCTACCCCTCCGAT GGGCCTGCTGCTCGCCTGGTCAATATGTGCTTTGGAAGTCGGGCTTCTCT CTGCTCCCTTCCTTCGCCCCATGTCACCTCGCACACCCTCCCCTCCTCCG GCACCCGCTGGCTGTCCGGTGCTGAGTTAAACGAAGACCAACGCGCCGCG ATCGCCATAGGACTAGCGACGGACGATGTCGCCCTCATTCATGGTCCTCC AGGAACAGGGAAGACCACGGCAGTGGTGGAATTGATCCTACAGGCTGTGC ATCGGCACAAGAGGAGACTCTTGGTCTGTGCGCCCTCGAATGTGGCAGTC GATAACATGGTGGAACGCATTGCAGCTGCCACTTCTCAGAGCAGTAGTAG TAGTAGTAGTAGTAGTGGTAGCAGCAGCAGAGCCTCGTCCTCTCTTTACT CGTCTTCATTCAAGCCCCCCCGCATTGTCCGCCTCGGCCATCCCGCCCGT CTATCGCCCGCAACCCTCGCCTACTCCCTTGAAGCCCTCATCGCCACCGC AGACGGGACCAGCATCGTCTCGGACATTCGTGCCGAGATCTCTGCCTTAG AGAGGAAAAAATTCAGCTCTCGAGGCTTCAGGCTCAAGCAAGAAAAGAGT GCGTGGCGCCAAGAAATGCGTGGACTGAAAAAAGAGATGCGGGTGCGAGA GGAAGGGGTGGTGAGGGACGTGCTCAAGAGTCGGGACATTGTGCTGTGTA CGTGCGTGGGGGCAGCGACTAGGTTGCTAACAGAAGAGACGTTTGATATG GTGGTGATAGATGAGGCCGCGCAGAGCCTGGAAGCGGCCTGCTGGATCCC GATGCTGAAGGGAAGTAGGGTGGTGCTCGCGGGGGATCACAAGCAGTTGC CACCGACGATCAAGAGTCGGAAGGCGGATAAGATGGGCTTGGCCGTGACG TTGTTCGACCGACTTATGCATTTAGATGAAGCGTTCTGGACCCCTTCTTC CTTGATTCCTTCTCTTCCTCCCCCTCCCTCCCCCTCTTCTTCTTCTCTCC CCTCTTCGCCTAAGGCCAGCCAAGGGATGAAGAAGGAGAAGAAGAGGGAG GGAGGGAGGACGAGAATGTTGACGGTGCAGTATCGAATGCACGCGAATAT TTGCGGATGGGCGAGCAAAGCCATGTATGCTGGCTTACTGGTCCCCGATG CGTCGGTGGCAAGCAGAACACTGGCAGGCCTGTCGGAGGGAGGGAAGGAG AGTGAACCAAATGACAAGGAGAGGGAGGAGAGGAAGAAGGAGCAGGAAGA GGAGAAGGAAGGGAGGGATGCGCAGGAGCAGGACATGACAAAAGCTGTCC TCCTCTTCCTCGACACTGCTGGATGCGGCATGGACGAAGAGGAAGGAGAG CGGGAAAAGGACAAAGACACTCCTCCTCCCGTTCCAATGAAGGTGAGGCT CTGGTCGTCTCCGCGCACGTGCACGCGCTCGTAA back to top
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