jgi.p|Nanoce1779_2|601997, mRNA_8431 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|601997
Unique Name	mRNA_8431
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4559
Alignment location	scaffold_24:247693..252251 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	602083
Track	FilteredModels2
ProteinId	601997

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_24	supercontig	scaffold_24:247693..252251 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|601997	gene_8431	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|601997	mRNA_8431-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_8431	CDS_8431	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_24:247693..252251-
coding sequence from alignment at scaffold_24:247693..252251-

mRNA sequence

>mRNA_8431 ID=mRNA_8431|Name=jgi.p|Nanoce1779_2|601997|organism=Nannochloropsis oceanica|type=mRNA|length=4559bp
CATGCGTGAACACGCCATGGAATTTGACGGTCTCTTAGCTGAGCAGCAGC
AGCAGCAGCAACAGCAACAACAGGGCGAGCAGGAGGGAGGGGCGGGGCGG
GGGGAAGTCAGGGCTGTGCCTGTGGCGTCGGCCAAGGCCAAGTCTCGGTT
CCAGAGGCAGAAGAAGGCGATTGAGGCCGCGATGCCCGCACCCATGGGCA
CTCTTTCTGAGGCTCCTCAGCCGATTGATCCGATGACGGGCGTGAAGGTG
GAGGGCTTGGAAGCGGCGCGCGGGGGAGAGGAGGATGAGGAAGAGGATCC
ATACTCCATCAGCAGTGTGACGAACTCGGCGGCCCCTGGTGCGAAGACGG
CGACAGGATCAGTGAAGTGGGAGACGGTTGCAAAGCAAGAGGAAGACGGG
ATGGAATATGTGCCTTTCTTTTGGATTGACGCGCATGAACAGAACGGAAT
ACTTTATTTATTTGGCAAGGTGGCAGTAGAGGAGGGGAATTTCGTTTCGG
CTGCTTGCTGCGTGCATGGAATGCAGAATTCCCTTTTGGTCCTGCCCAAG
CGAACGGGCAATGCCGGACCGGATGGGAAGGACGTGCGGTATGGCATGGC
CGATGTGTACAAGGAGGTGCAAGACCTGCTCATCCCCTCGGTCATCCCTT
GTGGTGCCGGGCAAGGTTTCAAGTGCAAGCCCGTCCGCCGCAAATATGCT
TTCGAGTTGGAAGAGATACCGAGGGAGGAGACAGAGTACCTGAAAGTCGT
CTACTCCGCACAGCACGGTCTCCCCTCCCCCGAGCGGTGCGAATCGGGCG
GTCGTTATTTTGAACGTGTCTTTGGATCGCGCACGACGGCTCTGGAGCGA
TTCTTGCTCAAGCGACAGCTGATGGGCCCTGGCTGGCTCAAGGTCCACAG
CCCTCGCCCTGCCTCCTCCTCTGCGACTATTGCCAAGTTTGAGTTTGTGG
TTGACGATCCAAAGTTGGTCCGACGCCTTGAGGCTCCTCCTCCGGCGCCT
CCCGTGGTAGTGATGTCGGTGGCAATCAAGACGGTTGTCAACCCCGCCTC
ACAGCTCCACGAGGTTGTTGCCATTTCCACCATGACTCACACTGGTGTCA
ATTGCGACGGGCCCACAGAAACGGGACCCCAGCATATTCGCCAGGTTACA
GCTGTGAGGCCTTTGGGGGGGAGTGCCGGCCCTGGACATCCCGCGGCTTT
TCCTCATGATATGGCACGCGAAGTGGAAGCGCAGAGTCGCAAGACCCGTA
TTCAGACGCAGGGGAATGAGCGGGCGTTACTCTCGTGGTTCTTTCAACGG
TTGCAAACGGAAGACCCCGATATGATAGTGGGGCACAATCTACTGGGTTT
CGAGTTGGAGGTGCTCCTGGTGCGTGCGACTGCTCTGAAGGTCTCTGTGT
GGCACAAGATCGGCCGCCTCCGCCGCTCCAAGTTCCCCAACCCGAAGGGC
CTCGCCCGGGACATCAACCTTTTCGGTCTGACAGCTGGCCGGCTTATGGC
CGACACCTACCTCACTGCACGAGAGCACCTGCGGGAGACCAATTACTCTC
TCGGCAACCTCGCTGCCACGCAGCTTCGCCTCCTCCACCCCCGCGCGCAA
ATCGACCCGTTGCAAGTCCCTGCATTCTTCGGCTCGTCCAAGCTGATTGT
GAATCTGGCGCAACACACGGCCTTTGACGCGCAGCTCGTTCAGCGGCTCT
GCTTGCGCCTGCAGCTGGTGCCACTCACCAAGCAGCTGACCAACATCTCA
GGAAATCTGTGGGCACGTACCATCAAGGGGAATCGGGCCGAGCGCATTGA
GTACTTGCTCCTGCACGAGTTCCACAACCTCAAGTACGTCACGCCGGAAC
GACACGCGTTTGGGGCTCGGGATCCTTCGAAGGAACAGCAGGGTGGAGGG
AAGGGAGGGAGTAAGAAAGCAGGGGCAGCTCAGACGGCTGCGACCATGGA
CCATGACATTCCTGAAGAGGACGAGCACCCAAGCGGCGGGCCTGGAGGGG
CGGGGCAGCGTGCCACGCGGGGTAGGCAGAAGCCGGCATATGCTGGTGGA
TTGGTGCTAGAGCCGAAGAAAGGCTTGTATGATTCGTACATTCTGCTACT
GGATTTCAATTCACTGTATCCCTCGATTATTCAAGAATACAACATGTGTT
TCACCACCATCAACTGGTCTACTTTTGCCAGCAACAGCAGTACCGGTGGA
ACGGGCCCTACGGCCATCAAAAGAACAGGAGTGGAGGACGAGGAGGGAGG
GGAGGAAGATGACTCGGCTGCAGCAGGTGCCGTGCTGCCACCGCTGCCGG
ACACGGCGTTAGAGCAGGGGGTGTTGCCTCGGGTGATCAAGACTTTGGTA
GATCGTCGGTCGTCGGTGAAAAAGCTGCTCAAAGGGGAGAAGGACGCGGC
GAAGCGTGAGCAGTTGGATATTCGACAAAAGGCGCTGAAATTAACGGCCA
ATAGTATGTATGGATGTTTAGGCTTTTCGCACTCGCGGTTCTTTGCTCGC
CCGATTGCGGCATTGGTGACGGCGATGGGTCGGGAGACGCTGCAGAGGAC
TGTGGATGTGGCTCAGAACCAGTTATCTTTAGACGTGATTTATGGGGATA
CGGACTCCATTATGATTAATACTACTGTTGCCTCTCGGGACGAGTTTGAT
GGGGGGTTAGGAGGAGAGGGGGAAGACAATCCGGCGGCGCGGAAGGCGAG
GTTGGAGCAAGACCTGGAAAGGATTCGTGAGGTGAAGGCGAAGGGATCAT
TAGTCAAACAGGCTGTGAACAAGCTCTACAAGAGTCTCGAGCTAGAGGTG
GATGGGATATTTAAGTGCATGTTGCTCTTGAAGAAGAAGAAGTACGCGGC
GTTGACAGTGACGGAGACGCCAGAAGGCACTCTGGCCTACGCCAAGGAGC
TCAAGGGCCTGGACCTGGTGCGACGTGACTGGTGCGTGCTCTCCAAGGAG
ACAGGCCGCTTTGTCATCGACCAAATCCTGTCGGGGGAGAACCGCGACGC
AGTGGTAGCGACCATCCACACCTACCTGGAGGAGCTGGCCAAGCGGATGC
GTGCGGGCGAGATAGACGTGCGCCAGTACGCTATTACCAAGGGGTTGAAC
AAGGCCCCCCACGAGTATCCCGATGCCAAGTCCCAACCCCATTTACAGGT
GGCCCTGGCAATGATGAAGGCGGGGAAACCGGTGAATGTGGGTGATCACA
TTGAGTACGTGATTTGCGAGAAGGAGGGGGCCAAGGCCGCGGCTGAACGG
GCGTTCCATCCTGATGACGTGCAGCGGTCCGAGGGTGAGTTGAAGGTGGA
CGTTGAGTGGTACCTGACCCAGCAGATCTTGCCGCCCATCTCTCGTCTGT
GTGAGCCGATTGAGGGGACCTCGGTGGCTATTTTGGCGGAACGGTTGGGG
TTGGACAAGAGCCGTTTTGGAGGAGGAGGCAATGGGGGTGCGCATGGGAA
CGATGATGAGGCGTGGGGGTTTACCCCGATGTGCAAGATGGAGGACTCCG
AGCGGTTTATGGGGTGTGATGCGCTCAAGCTTCGGTGCACAAGCTGCAGC
CAAGAGGCGGACTTTGCCGGGGTATTCTATGCGGCCCCTGCAGCGGCAAC
GACAGAAGATGGGAGCAGCAGTAGTGGCTCGGCGGGGAAGACGGCCGTTG
GGTTGCACTCGGGGTTGCTTTGCCCCAACCCCGAGTGCCAGGCCTTGTAT
TGGGGTGCGCCCAACGCGGCCTCGTGCTTTGCACGACTGTTTAATCGGGT
GACGTTGACGGTGCGGCAGCACGTTAAGAAGTACTACGACTGTTGGTTGC
TGTGCGACGACTCGGGCTGTAAGCGCCGCACCCGCCAGCAATCTGTGCTG
GCCACGGCGTGCTTGGCCAGGGGCTGCCACGGGCACATGGACATGGAGTA
CTCGGAGAAGCAGTTGCACACGCAGCTCAAATTCTTGGAGACCCTCTTTG
ACGTCAAGCGCGCCAAGTCTAAAAAGATTGCGGCAGGTGTGGTGCCGGTG
CCGCTGCCCGATGGCCACATACGTGTGCTGGACTTGCTGCACGATCAGAC
AAGGCAGATGGTATCGAGCACGGCTTATAACTGGATTCGACCGTCATTGT
GGAGCATGGTGTTCAGCGGCGTGAAGCAGCAGGAGCAGTAGAGGGCGGGG
ACAGGATTGGTGTTGGGAGGAGCGAACTAAAGGGGTGATATAGCAAAATA
ATATTATTAGGTTTGTTTCACTGTAGGAAGTGGGGAGCAGGGAAAGCTGA
TGGGATACTGAAGAAGTGGTGGGTGAGTGAGCGACAGGCATGCGATGTGT
TTTGTGTGTATGGTAAGAGAAACAAATTCGACAGACACTATATAACAGCG
GTTGGAGACACAAAAGAATAAGAAAGAAACTACTTTTCTCAGTCTCGTAG
AAGAAGGGTAGAATACAACAAATATCTTTAAAAGAAACAACCTGAGGTAG
TCCAAATTTATACGACACTATTTCGATGTGCGTCCAATAGCCTAGAACTC
AAAAAGGAAAGTCGTAATGAACGCGATTACAAGATGAAACAAGGATTTCT
GGCTTGCGT

protein sequence of jgi.p|Nanoce1779_2|601997

>mRNA_8431-protein ID=mRNA_8431-protein|Name=jgi.p|Nanoce1779_2|601997|organism=Nannochloropsis oceanica|type=polypeptide|length=1380bp
MREHAMEFDGLLAEQQQQQQQQQQGEQEGGAGRGEVRAVPVASAKAKSRF
QRQKKAIEAAMPAPMGTLSEAPQPIDPMTGVKVEGLEAARGGEEDEEEDP
YSISSVTNSAAPGAKTATGSVKWETVAKQEEDGMEYVPFFWIDAHEQNGI
LYLFGKVAVEEGNFVSAACCVHGMQNSLLVLPKRTGNAGPDGKDVRYGMA
DVYKEVQDLLIPSVIPCGAGQGFKCKPVRRKYAFELEEIPREETEYLKVV
YSAQHGLPSPERCESGGRYFERVFGSRTTALERFLLKRQLMGPGWLKVHS
PRPASSSATIAKFEFVVDDPKLVRRLEAPPPAPPVVVMSVAIKTVVNPAS
QLHEVVAISTMTHTGVNCDGPTETGPQHIRQVTAVRPLGGSAGPGHPAAF
PHDMAREVEAQSRKTRIQTQGNERALLSWFFQRLQTEDPDMIVGHNLLGF
ELEVLLVRATALKVSVWHKIGRLRRSKFPNPKGLARDINLFGLTAGRLMA
DTYLTAREHLRETNYSLGNLAATQLRLLHPRAQIDPLQVPAFFGSSKLIV
NLAQHTAFDAQLVQRLCLRLQLVPLTKQLTNISGNLWARTIKGNRAERIE
YLLLHEFHNLKYVTPERHAFGARDPSKEQQGGGKGGSKKAGAAQTAATMD
HDIPEEDEHPSGGPGGAGQRATRGRQKPAYAGGLVLEPKKGLYDSYILLL
DFNSLYPSIIQEYNMCFTTINWSTFASNSSTGGTGPTAIKRTGVEDEEGG
EEDDSAAAGAVLPPLPDTALEQGVLPRVIKTLVDRRSSVKKLLKGEKDAA
KREQLDIRQKALKLTANSMYGCLGFSHSRFFARPIAALVTAMGRETLQRT
VDVAQNQLSLDVIYGDTDSIMINTTVASRDEFDGGLGGEGEDNPAARKAR
LEQDLERIREVKAKGSLVKQAVNKLYKSLELEVDGIFKCMLLLKKKKYAA
LTVTETPEGTLAYAKELKGLDLVRRDWCVLSKETGRFVIDQILSGENRDA
VVATIHTYLEELAKRMRAGEIDVRQYAITKGLNKAPHEYPDAKSQPHLQV
ALAMMKAGKPVNVGDHIEYVICEKEGAKAAAERAFHPDDVQRSEGELKVD
VEWYLTQQILPPISRLCEPIEGTSVAILAERLGLDKSRFGGGGNGGAHGN
DDEAWGFTPMCKMEDSERFMGCDALKLRCTSCSQEADFAGVFYAAPAAAT
TEDGSSSSGSAGKTAVGLHSGLLCPNPECQALYWGAPNAASCFARLFNRV
TLTVRQHVKKYYDCWLLCDDSGCKRRTRQQSVLATACLARGCHGHMDMEY
SEKQLHTQLKFLETLFDVKRAKSKKIAAGVVPVPLPDGHIRVLDLLHDQT
RQMVSSTAYNWIRPSLWSMVFSGVKQQEQ*

mRNA from alignment at scaffold_24:247693..252251-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_8431 ID=mRNA_8431|Name=jgi.p|Nanoce1779_2|601997|organism=Nannochloropsis oceanica|type=mRNA|length=4559bp|location=Sequence derived from alignment at scaffold_24:247693..252251- (Nannochloropsis oceanica)
CATGCGTGAACACGCCATGGAATTTGACGGTCTCTTAGCTGAGCAGCAGC
AGCAGCAGCAACAGCAACAACAGGGCGAGCAGGAGGGAGGGGCGGGGCGG
GGGGAAGTCAGGGCTGTGCCTGTGGCGTCGGCCAAGGCCAAGTCTCGGTT
CCAGAGGCAGAAGAAGGCGATTGAGGCCGCGATGCCCGCACCCATGGGCA
CTCTTTCTGAGGCTCCTCAGCCGATTGATCCGATGACGGGCGTGAAGGTG
GAGGGCTTGGAAGCGGCGCGCGGGGGAGAGGAGGATGAGGAAGAGGATCC
ATACTCCATCAGCAGTGTGACGAACTCGGCGGCCCCTGGTGCGAAGACGG
CGACAGGATCAGTGAAGTGGGAGACGGTTGCAAAGCAAGAGGAAGACGGG
ATGGAATATGTGCCTTTCTTTTGGATTGACGCGCATGAACAGAACGGAAT
ACTTTATTTATTTGGCAAGGTGGCAGTAGAGGAGGGGAATTTCGTTTCGG
CTGCTTGCTGCGTGCATGGAATGCAGAATTCCCTTTTGGTCCTGCCCAAG
CGAACGGGCAATGCCGGACCGGATGGGAAGGACGTGCGGTATGGCATGGC
CGATGTGTACAAGGAGGTGCAAGACCTGCTCATCCCCTCGGTCATCCCTT
GTGGTGCCGGGCAAGGTTTCAAGTGCAAGCCCGTCCGCCGCAAATATGCT
TTCGAGTTGGAAGAGATACCGAGGGAGGAGACAGAGTACCTGAAAGTCGT
CTACTCCGCACAGCACGGTCTCCCCTCCCCCGAGCGGTGCGAATCGGGCG
GTCGTTATTTTGAACGTGTCTTTGGATCGCGCACGACGGCTCTGGAGCGA
TTCTTGCTCAAGCGACAGCTGATGGGCCCTGGCTGGCTCAAGGTCCACAG
CCCTCGCCCTGCCTCCTCCTCTGCGACTATTGCCAAGTTTGAGTTTGTGG
TTGACGATCCAAAGTTGGTCCGACGCCTTGAGGCTCCTCCTCCGGCGCCT
CCCGTGGTAGTGATGTCGGTGGCAATCAAGACGGTTGTCAACCCCGCCTC
ACAGCTCCACGAGGTTGTTGCCATTTCCACCATGACTCACACTGGTGTCA
ATTGCGACGGGCCCACAGAAACGGGACCCCAGCATATTCGCCAGGTTACA
GCTGTGAGGCCTTTGGGGGGGAGTGCCGGCCCTGGACATCCCGCGGCTTT
TCCTCATGATATGGCACGCGAAGTGGAAGCGCAGAGTCGCAAGACCCGTA
TTCAGACGCAGGGGAATGAGCGGGCGTTACTCTCGTGGTTCTTTCAACGG
TTGCAAACGGAAGACCCCGATATGATAGTGGGGCACAATCTACTGGGTTT
CGAGTTGGAGGTGCTCCTGGTGCGTGCGACTGCTCTGAAGGTCTCTGTGT
GGCACAAGATCGGCCGCCTCCGCCGCTCCAAGTTCCCCAACCCGAAGGGC
CTCGCCCGGGACATCAACCTTTTCGGTCTGACAGCTGGCCGGCTTATGGC
CGACACCTACCTCACTGCACGAGAGCACCTGCGGGAGACCAATTACTCTC
TCGGCAACCTCGCTGCCACGCAGCTTCGCCTCCTCCACCCCCGCGCGCAA
ATCGACCCGTTGCAAGTCCCTGCATTCTTCGGCTCGTCCAAGCTGATTGT
GAATCTGGCGCAACACACGGCCTTTGACGCGCAGCTCGTTCAGCGGCTCT
GCTTGCGCCTGCAGCTGGTGCCACTCACCAAGCAGCTGACCAACATCTCA
GGAAATCTGTGGGCACGTACCATCAAGGGGAATCGGGCCGAGCGCATTGA
GTACTTGCTCCTGCACGAGTTCCACAACCTCAAGTACGTCACGCCGGAAC
GACACGCGTTTGGGGCTCGGGATCCTTCGAAGGAACAGCAGGGTGGAGGG
AAGGGAGGGAGTAAGAAAGCAGGGGCAGCTCAGACGGCTGCGACCATGGA
CCATGACATTCCTGAAGAGGACGAGCACCCAAGCGGCGGGCCTGGAGGGG
CGGGGCAGCGTGCCACGCGGGGTAGGCAGAAGCCGGCATATGCTGGTGGA
TTGGTGCTAGAGCCGAAGAAAGGCTTGTATGATTCGTACATTCTGCTACT
GGATTTCAATTCACTGTATCCCTCGATTATTCAAGAATACAACATGTGTT
TCACCACCATCAACTGGTCTACTTTTGCCAGCAACAGCAGTACCGGTGGA
ACGGGCCCTACGGCCATCAAAAGAACAGGAGTGGAGGACGAGGAGGGAGG
GGAGGAAGATGACTCGGCTGCAGCAGGTGCCGTGCTGCCACCGCTGCCGG
ACACGGCGTTAGAGCAGGGGGTGTTGCCTCGGGTGATCAAGACTTTGGTA
GATCGTCGGTCGTCGGTGAAAAAGCTGCTCAAAGGGGAGAAGGACGCGGC
GAAGCGTGAGCAGTTGGATATTCGACAAAAGGCGCTGAAATTAACGGCCA
ATAGTATGTATGGATGTTTAGGCTTTTCGCACTCGCGGTTCTTTGCTCGC
CCGATTGCGGCATTGGTGACGGCGATGGGTCGGGAGACGCTGCAGAGGAC
TGTGGATGTGGCTCAGAACCAGTTATCTTTAGACGTGATTTATGGGGATA
CGGACTCCATTATGATTAATACTACTGTTGCCTCTCGGGACGAGTTTGAT
GGGGGGTTAGGAGGAGAGGGGGAAGACAATCCGGCGGCGCGGAAGGCGAG
GTTGGAGCAAGACCTGGAAAGGATTCGTGAGGTGAAGGCGAAGGGATCAT
TAGTCAAACAGGCTGTGAACAAGCTCTACAAGAGTCTCGAGCTAGAGGTG
GATGGGATATTTAAGTGCATGTTGCTCTTGAAGAAGAAGAAGTACGCGGC
GTTGACAGTGACGGAGACGCCAGAAGGCACTCTGGCCTACGCCAAGGAGC
TCAAGGGCCTGGACCTGGTGCGACGTGACTGGTGCGTGCTCTCCAAGGAG
ACAGGCCGCTTTGTCATCGACCAAATCCTGTCGGGGGAGAACCGCGACGC
AGTGGTAGCGACCATCCACACCTACCTGGAGGAGCTGGCCAAGCGGATGC
GTGCGGGCGAGATAGACGTGCGCCAGTACGCTATTACCAAGGGGTTGAAC
AAGGCCCCCCACGAGTATCCCGATGCCAAGTCCCAACCCCATTTACAGGT
GGCCCTGGCAATGATGAAGGCGGGGAAACCGGTGAATGTGGGTGATCACA
TTGAGTACGTGATTTGCGAGAAGGAGGGGGCCAAGGCCGCGGCTGAACGG
GCGTTCCATCCTGATGACGTGCAGCGGTCCGAGGGTGAGTTGAAGGTGGA
CGTTGAGTGGTACCTGACCCAGCAGATCTTGCCGCCCATCTCTCGTCTGT
GTGAGCCGATTGAGGGGACCTCGGTGGCTATTTTGGCGGAACGGTTGGGG
TTGGACAAGAGCCGTTTTGGAGGAGGAGGCAATGGGGGTGCGCATGGGAA
CGATGATGAGGCGTGGGGGTTTACCCCGATGTGCAAGATGGAGGACTCCG
AGCGGTTTATGGGGTGTGATGCGCTCAAGCTTCGGTGCACAAGCTGCAGC
CAAGAGGCGGACTTTGCCGGGGTATTCTATGCGGCCCCTGCAGCGGCAAC
GACAGAAGATGGGAGCAGCAGTAGTGGCTCGGCGGGGAAGACGGCCGTTG
GGTTGCACTCGGGGTTGCTTTGCCCCAACCCCGAGTGCCAGGCCTTGTAT
TGGGGTGCGCCCAACGCGGCCTCGTGCTTTGCACGACTGTTTAATCGGGT
GACGTTGACGGTGCGGCAGCACGTTAAGAAGTACTACGACTGTTGGTTGC
TGTGCGACGACTCGGGCTGTAAGCGCCGCACCCGCCAGCAATCTGTGCTG
GCCACGGCGTGCTTGGCCAGGGGCTGCCACGGGCACATGGACATGGAGTA
CTCGGAGAAGCAGTTGCACACGCAGCTCAAATTCTTGGAGACCCTCTTTG
ACGTCAAGCGCGCCAAGTCTAAAAAGATTGCGGCAGGTGTGGTGCCGGTG
CCGCTGCCCGATGGCCACATACGTGTGCTGGACTTGCTGCACGATCAGAC
AAGGCAGATGGTATCGAGCACGGCTTATAACTGGATTCGACCGTCATTGT
GGAGCATGGTGTTCAGCGGCGTGAAGCAGCAGGAGCAGTAGAGGGCGGGG
ACAGGATTGGTGTTGGGAGGAGCGAACTAAAGGGGTGATATAGCAAAATA
ATATTATTAGGTTTGTTTCACTGTAGGAAGTGGGGAGCAGGGAAAGCTGA
TGGGATACTGAAGAAGTGGTGGGTGAGTGAGCGACAGGCATGCGATGTGT
TTTGTGTGTATGGTAAGAGAAACAAATTCGACAGACACTATATAACAGCG
GTTGGAGACACAAAAGAATAAGAAAGAAACTACTTTTCTCAGTCTCGTAG
AAGAAGGGTAGAATACAACAAATATCTTTAAAAGAAACAACCTGAGGTAG
TCCAAATTTATACGACACTATTTCGATGTGCGTCCAATAGCCTAGAACTC
AAAAAGGAAAGTCGTAATGAACGCGATTACAAGATGAAACAAGGATTTCT
GGCTTGCGT

Coding sequence (CDS) from alignment at scaffold_24:247693..252251-

>mRNA_8431 ID=mRNA_8431|Name=jgi.p|Nanoce1779_2|601997|organism=Nannochloropsis oceanica|type=CDS|length=4140bp|location=Sequence derived from alignment at scaffold_24:247693..252251- (Nannochloropsis oceanica)
ATGCGTGAACACGCCATGGAATTTGACGGTCTCTTAGCTGAGCAGCAGCA
GCAGCAGCAACAGCAACAACAGGGCGAGCAGGAGGGAGGGGCGGGGCGGG
GGGAAGTCAGGGCTGTGCCTGTGGCGTCGGCCAAGGCCAAGTCTCGGTTC
CAGAGGCAGAAGAAGGCGATTGAGGCCGCGATGCCCGCACCCATGGGCAC
TCTTTCTGAGGCTCCTCAGCCGATTGATCCGATGACGGGCGTGAAGGTGG
AGGGCTTGGAAGCGGCGCGCGGGGGAGAGGAGGATGAGGAAGAGGATCCA
TACTCCATCAGCAGTGTGACGAACTCGGCGGCCCCTGGTGCGAAGACGGC
GACAGGATCAGTGAAGTGGGAGACGGTTGCAAAGCAAGAGGAAGACGGGA
TGGAATATGTGCCTTTCTTTTGGATTGACGCGCATGAACAGAACGGAATA
CTTTATTTATTTGGCAAGGTGGCAGTAGAGGAGGGGAATTTCGTTTCGGC
TGCTTGCTGCGTGCATGGAATGCAGAATTCCCTTTTGGTCCTGCCCAAGC
GAACGGGCAATGCCGGACCGGATGGGAAGGACGTGCGGTATGGCATGGCC
GATGTGTACAAGGAGGTGCAAGACCTGCTCATCCCCTCGGTCATCCCTTG
TGGTGCCGGGCAAGGTTTCAAGTGCAAGCCCGTCCGCCGCAAATATGCTT
TCGAGTTGGAAGAGATACCGAGGGAGGAGACAGAGTACCTGAAAGTCGTC
TACTCCGCACAGCACGGTCTCCCCTCCCCCGAGCGGTGCGAATCGGGCGG
TCGTTATTTTGAACGTGTCTTTGGATCGCGCACGACGGCTCTGGAGCGAT
TCTTGCTCAAGCGACAGCTGATGGGCCCTGGCTGGCTCAAGGTCCACAGC
CCTCGCCCTGCCTCCTCCTCTGCGACTATTGCCAAGTTTGAGTTTGTGGT
TGACGATCCAAAGTTGGTCCGACGCCTTGAGGCTCCTCCTCCGGCGCCTC
CCGTGGTAGTGATGTCGGTGGCAATCAAGACGGTTGTCAACCCCGCCTCA
CAGCTCCACGAGGTTGTTGCCATTTCCACCATGACTCACACTGGTGTCAA
TTGCGACGGGCCCACAGAAACGGGACCCCAGCATATTCGCCAGGTTACAG
CTGTGAGGCCTTTGGGGGGGAGTGCCGGCCCTGGACATCCCGCGGCTTTT
CCTCATGATATGGCACGCGAAGTGGAAGCGCAGAGTCGCAAGACCCGTAT
TCAGACGCAGGGGAATGAGCGGGCGTTACTCTCGTGGTTCTTTCAACGGT
TGCAAACGGAAGACCCCGATATGATAGTGGGGCACAATCTACTGGGTTTC
GAGTTGGAGGTGCTCCTGGTGCGTGCGACTGCTCTGAAGGTCTCTGTGTG
GCACAAGATCGGCCGCCTCCGCCGCTCCAAGTTCCCCAACCCGAAGGGCC
TCGCCCGGGACATCAACCTTTTCGGTCTGACAGCTGGCCGGCTTATGGCC
GACACCTACCTCACTGCACGAGAGCACCTGCGGGAGACCAATTACTCTCT
CGGCAACCTCGCTGCCACGCAGCTTCGCCTCCTCCACCCCCGCGCGCAAA
TCGACCCGTTGCAAGTCCCTGCATTCTTCGGCTCGTCCAAGCTGATTGTG
AATCTGGCGCAACACACGGCCTTTGACGCGCAGCTCGTTCAGCGGCTCTG
CTTGCGCCTGCAGCTGGTGCCACTCACCAAGCAGCTGACCAACATCTCAG
GAAATCTGTGGGCACGTACCATCAAGGGGAATCGGGCCGAGCGCATTGAG
TACTTGCTCCTGCACGAGTTCCACAACCTCAAGTACGTCACGCCGGAACG
ACACGCGTTTGGGGCTCGGGATCCTTCGAAGGAACAGCAGGGTGGAGGGA
AGGGAGGGAGTAAGAAAGCAGGGGCAGCTCAGACGGCTGCGACCATGGAC
CATGACATTCCTGAAGAGGACGAGCACCCAAGCGGCGGGCCTGGAGGGGC
GGGGCAGCGTGCCACGCGGGGTAGGCAGAAGCCGGCATATGCTGGTGGAT
TGGTGCTAGAGCCGAAGAAAGGCTTGTATGATTCGTACATTCTGCTACTG
GATTTCAATTCACTGTATCCCTCGATTATTCAAGAATACAACATGTGTTT
CACCACCATCAACTGGTCTACTTTTGCCAGCAACAGCAGTACCGGTGGAA
CGGGCCCTACGGCCATCAAAAGAACAGGAGTGGAGGACGAGGAGGGAGGG
GAGGAAGATGACTCGGCTGCAGCAGGTGCCGTGCTGCCACCGCTGCCGGA
CACGGCGTTAGAGCAGGGGGTGTTGCCTCGGGTGATCAAGACTTTGGTAG
ATCGTCGGTCGTCGGTGAAAAAGCTGCTCAAAGGGGAGAAGGACGCGGCG
AAGCGTGAGCAGTTGGATATTCGACAAAAGGCGCTGAAATTAACGGCCAA
TAGTATGTATGGATGTTTAGGCTTTTCGCACTCGCGGTTCTTTGCTCGCC
CGATTGCGGCATTGGTGACGGCGATGGGTCGGGAGACGCTGCAGAGGACT
GTGGATGTGGCTCAGAACCAGTTATCTTTAGACGTGATTTATGGGGATAC
GGACTCCATTATGATTAATACTACTGTTGCCTCTCGGGACGAGTTTGATG
GGGGGTTAGGAGGAGAGGGGGAAGACAATCCGGCGGCGCGGAAGGCGAGG
TTGGAGCAAGACCTGGAAAGGATTCGTGAGGTGAAGGCGAAGGGATCATT
AGTCAAACAGGCTGTGAACAAGCTCTACAAGAGTCTCGAGCTAGAGGTGG
ATGGGATATTTAAGTGCATGTTGCTCTTGAAGAAGAAGAAGTACGCGGCG
TTGACAGTGACGGAGACGCCAGAAGGCACTCTGGCCTACGCCAAGGAGCT
CAAGGGCCTGGACCTGGTGCGACGTGACTGGTGCGTGCTCTCCAAGGAGA
CAGGCCGCTTTGTCATCGACCAAATCCTGTCGGGGGAGAACCGCGACGCA
GTGGTAGCGACCATCCACACCTACCTGGAGGAGCTGGCCAAGCGGATGCG
TGCGGGCGAGATAGACGTGCGCCAGTACGCTATTACCAAGGGGTTGAACA
AGGCCCCCCACGAGTATCCCGATGCCAAGTCCCAACCCCATTTACAGGTG
GCCCTGGCAATGATGAAGGCGGGGAAACCGGTGAATGTGGGTGATCACAT
TGAGTACGTGATTTGCGAGAAGGAGGGGGCCAAGGCCGCGGCTGAACGGG
CGTTCCATCCTGATGACGTGCAGCGGTCCGAGGGTGAGTTGAAGGTGGAC
GTTGAGTGGTACCTGACCCAGCAGATCTTGCCGCCCATCTCTCGTCTGTG
TGAGCCGATTGAGGGGACCTCGGTGGCTATTTTGGCGGAACGGTTGGGGT
TGGACAAGAGCCGTTTTGGAGGAGGAGGCAATGGGGGTGCGCATGGGAAC
GATGATGAGGCGTGGGGGTTTACCCCGATGTGCAAGATGGAGGACTCCGA
GCGGTTTATGGGGTGTGATGCGCTCAAGCTTCGGTGCACAAGCTGCAGCC
AAGAGGCGGACTTTGCCGGGGTATTCTATGCGGCCCCTGCAGCGGCAACG
ACAGAAGATGGGAGCAGCAGTAGTGGCTCGGCGGGGAAGACGGCCGTTGG
GTTGCACTCGGGGTTGCTTTGCCCCAACCCCGAGTGCCAGGCCTTGTATT
GGGGTGCGCCCAACGCGGCCTCGTGCTTTGCACGACTGTTTAATCGGGTG
ACGTTGACGGTGCGGCAGCACGTTAAGAAGTACTACGACTGTTGGTTGCT
GTGCGACGACTCGGGCTGTAAGCGCCGCACCCGCCAGCAATCTGTGCTGG
CCACGGCGTGCTTGGCCAGGGGCTGCCACGGGCACATGGACATGGAGTAC
TCGGAGAAGCAGTTGCACACGCAGCTCAAATTCTTGGAGACCCTCTTTGA
CGTCAAGCGCGCCAAGTCTAAAAAGATTGCGGCAGGTGTGGTGCCGGTGC
CGCTGCCCGATGGCCACATACGTGTGCTGGACTTGCTGCACGATCAGACA
AGGCAGATGGTATCGAGCACGGCTTATAACTGGATTCGACCGTCATTGTG
GAGCATGGTGTTCAGCGGCGTGAAGCAGCAGGAGCAGTAG

Synonyms

Publications