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Properties
| Property Name | Value |
|---|
| TranscriptId | 602025 |
| Track | FilteredModels2 |
| ProteinId | 601939 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_24 | supercontig | scaffold_24:209540..210597 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8416 ID=mRNA_8416|Name=jgi.p|Nanoce1779_2|601939|organism=Nannochloropsis oceanica|type=mRNA|length=788bp
ACAGAACTACAGTCATGCCAGCTGTCAGCATCACCACCCGGTTCTTGTTG
CGCGTCTCCACAGGGGTCGCGTCCAAGCCTCTCGCATCCCTTCGACGACT
TACGACCACTGGTCTTTGTCGCCGGCCCAATACCCTGCCACACTCGTCTC
CCTCCCTTTACCCTACCGCCGCCGCCAGCCGTGCCTTCTCAGCCCCGCCC
TCCGGCAAGAATGACTCTCACGATGATTTTAAGCCGCAAAAGACTGCCCC
ACCCGCAGATCTTGACGGGGCCATTAAGATGATTGCGGAACAGGTGAAGA
AGCATCAGATCATGCTGTACATGAAGGGCACGCCTGCCCGGCCGCAGTGT
GGCTTCTCGGCACAGGCCGTGCGGATTCTGCATGCTTCAGGGGTGGACTT
CGATTCGGTGAATGTGTTGGACTACCCCATGATCAGGGAGGGTGTCAAAA
AGTACTCGGAGTGGCCCACGGTACCTCAGCTCTTCGTGGCTGGGGAGTTT
GTGGGCGGGTGCGATATAATGACATCACTTTTTCAGTCGGGGGAACTGGC
TCAAATCTTGGAGGAGACGCTTAATCAGCAGAAGGAGGCGCAAAAGAGTG
GGGAGGGGAAGGCATGAGCAGAGAGAAGCAGGGGAAATGGTTTGAAGCAG
AAGGTGTACGTAAGAGGGATTGGGGGAGAGCGGGAAGATGATAGGAGGAG
GGAAAGAGAGGAGGAGAAAGGAATGAAAATTTTGAACGGAAAGATTACGG
AAGGGAAAGAAAAAGGAACACCTTATTTTCGACCCGAA back to topprotein sequence of jgi.p|Nanoce1779_2|601939 >mRNA_8416-protein ID=mRNA_8416-protein|Name=jgi.p|Nanoce1779_2|601939|organism=Nannochloropsis oceanica|type=polypeptide|length=201bp
MPAVSITTRFLLRVSTGVASKPLASLRRLTTTGLCRRPNTLPHSSPSLYP
TAAASRAFSAPPSGKNDSHDDFKPQKTAPPADLDGAIKMIAEQVKKHQIM
LYMKGTPARPQCGFSAQAVRILHASGVDFDSVNVLDYPMIREGVKKYSEW
PTVPQLFVAGEFVGGCDIMTSLFQSGELAQILEETLNQQKEAQKSGEGKA
* back to topmRNA from alignment at scaffold_24:209540..210597- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8416 ID=mRNA_8416|Name=jgi.p|Nanoce1779_2|601939|organism=Nannochloropsis oceanica|type=mRNA|length=1058bp|location=Sequence derived from alignment at scaffold_24:209540..210597- (Nannochloropsis oceanica)
ACAGAACTACAGTCATGCCAGCTGTCAGCATCACCACCCGGTTCTTGTTG
CGCGTCTCCACAGGGGTCGCGTCCAAGGTAAGATAAGGGCGTCGAAGGAG
ATGGGCAACAACCGACGGAGCAGCAATAGCATCGTGCCCGTGCATCACAT
TGACTCATGCCTGCCGGTCTACATACCCAATCCACAGCCTCTCGCATCCC
TTCGACGACTTACGACCACTGGTCTTTGTCGCCGGCCCAATACCCTGCCA
CACTCGTCTCCCTCCCTTTACCCTACCGCCGCCGCCAGCCGTGCCTTCTC
AGCCCCGCCCTCCGGCAAGAATGACTCTCACGATGATTTTAAGCCGCAAA
AGACTGCCCCACCCGCAGATCTTGACGGGGCCATTAAGATGATTGCGGAA
CAGGTGAAGAAGCATCAGATCATGCTGTACATGAAGGGCACGCCTGCCCG
GCCGCAGTGTGGCTTCTCGGCACAGGCCGTGCGGATTCTGCATGCTTCAG
GGGTGGACTTCGATTCGGTGAATGTGTTGGACTACCCCATGATCAGGGAG
GGTGTCAAAAAGTACTCGTAAGTCTAATTGGAAGAAGGTCGGGAGGAAGG
GGAAGGGGAGGGGACATGATCTTGCGTTTCTTATGCGTCGCTCCTTCCAT
TCCTCTTCCCCGTTCCTCGTCTCTCACTCTTCTTCCTTTCCTCCTTCCTC
TTCATCATCACTTCACCAATTTTCAAGGGAGTGGCCCACGGTACCTCAGC
TCTTCGTGGCTGGGGAGTTTGTGGGCGGGTGCGATATAATGACATCACTT
TTTCAGTCGGGGGAACTGGCTCAAATCTTGGAGGAGACGCTTAATCAGCA
GAAGGAGGCGCAAAAGAGTGGGGAGGGGAAGGCATGAGCAGAGAGAAGCA
GGGGAAATGGTTTGAAGCAGAAGGTGTACGTAAGAGGGATTGGGGGAGAG
CGGGAAGATGATAGGAGGAGGGAAAGAGAGGAGGAGAAAGGAATGAAAAT
TTTGAACGGAAAGATTACGGAAGGGAAAGAAAAAGGAACACCTTATTTTC
GACCCGAA back to topCoding sequence (CDS) from alignment at scaffold_24:209540..210597- >mRNA_8416 ID=mRNA_8416|Name=jgi.p|Nanoce1779_2|601939|organism=Nannochloropsis oceanica|type=CDS|length=1809bp|location=Sequence derived from alignment at scaffold_24:209540..210597- (Nannochloropsis oceanica)
GGAGTGGCCCACGGTACCTCAGCTCTTCGTGGCTGGGGAGTTTGTGGGCG
GGTGCGATATAATGACATCACTTTTTCAGTCGGGGGAACTGGCTCAAATC
TTGGAGGAGACGCTTAATCAGCAGAAGGAGGCGCAAAAGAGTGGGGAGGG
GAAGGCATGACCTCTCGCATCCCTTCGACGACTTACGACCACTGGTCTTT
GTCGCCGGCCCAATACCCTGCCACACTCGTCTCCCTCCCTTTACCCTACC
GCCGCCGCCAGCCGTGCCTTCTCAGCCCCGCCCTCCGGCAAGAATGACTC
TCACGATGATTTTAAGCCGCAAAAGACTGCCCCACCCGCAGATCTTGACG
GGGCCATTAAGATGATTGCGGAACAGGTGAAGAAGCATCAGATCATGCTG
TACATGAAGGGCACGCCTGCCCGGCCGCAGTGTGGCTTCTCGGCACAGGC
CGTGCGGATTCTGCATGCTTCAGGGGTGGACTTCGATTCGGTGAATGTGT
TGGACTACCCCATGATCAGGGAGGGTGTCAAAAAGTACTCATGCCAGCTG
TCAGCATCACCACCCGGTTCTTGTTGCGCGTCTCCACAGGGGTCGCGTCC
AAGGGAGTGGCCCACGGTACCTCAGCTCTTCGTGGCTGGGGAGTTTGTGG
GCGGGTGCGATATAATGACATCACTTTTTCAGTCGGGGGAACTGGCTCAA
ATCTTGGAGGAGACGCTTAATCAGCAGAAGGAGGCGCAAAAGAGTGGGGA
GGGGAAGGCATGACCTCTCGCATCCCTTCGACGACTTACGACCACTGGTC
TTTGTCGCCGGCCCAATACCCTGCCACACTCGTCTCCCTCCCTTTACCCT
ACCGCCGCCGCCAGCCGTGCCTTCTCAGCCCCGCCCTCCGGCAAGAATGA
CTCTCACGATGATTTTAAGCCGCAAAAGACTGCCCCACCCGCAGATCTTG
ACGGGGCCATTAAGATGATTGCGGAACAGGTGAAGAAGCATCAGATCATG
CTGTACATGAAGGGCACGCCTGCCCGGCCGCAGTGTGGCTTCTCGGCACA
GGCCGTGCGGATTCTGCATGCTTCAGGGGTGGACTTCGATTCGGTGAATG
TGTTGGACTACCCCATGATCAGGGAGGGTGTCAAAAAGTACTCATGCCAG
CTGTCAGCATCACCACCCGGTTCTTGTTGCGCGTCTCCACAGGGGTCGCG
TCCAAGGGAGTGGCCCACGGTACCTCAGCTCTTCGTGGCTGGGGAGTTTG
TGGGCGGGTGCGATATAATGACATCACTTTTTCAGTCGGGGGAACTGGCT
CAAATCTTGGAGGAGACGCTTAATCAGCAGAAGGAGGCGCAAAAGAGTGG
GGAGGGGAAGGCATGACCTCTCGCATCCCTTCGACGACTTACGACCACTG
GTCTTTGTCGCCGGCCCAATACCCTGCCACACTCGTCTCCCTCCCTTTAC
CCTACCGCCGCCGCCAGCCGTGCCTTCTCAGCCCCGCCCTCCGGCAAGAA
TGACTCTCACGATGATTTTAAGCCGCAAAAGACTGCCCCACCCGCAGATC
TTGACGGGGCCATTAAGATGATTGCGGAACAGGTGAAGAAGCATCAGATC
ATGCTGTACATGAAGGGCACGCCTGCCCGGCCGCAGTGTGGCTTCTCGGC
ACAGGCCGTGCGGATTCTGCATGCTTCAGGGGTGGACTTCGATTCGGTGA
ATGTGTTGGACTACCCCATGATCAGGGAGGGTGTCAAAAAGTACTCATGC
CAGCTGTCAGCATCACCACCCGGTTCTTGTTGCGCGTCTCCACAGGGGTC
GCGTCCAAG back to top
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