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Properties
| Property Name | Value |
|---|
| TranscriptId | 195600 |
| Track | FilteredModels2 |
| ProteinId | 195514 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_24 | supercontig | scaffold_24:196231..197386 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8407 ID=mRNA_8407|Name=jgi.p|Nanoce1779_2|195514|organism=Nannochloropsis oceanica|type=mRNA|length=953bp
CAGGAGGGGGGCTGAGAGGAAGGAAAGGGGTGAAGATGGAACGGAGTCAC
GAGGAAGGGCGGAAGGGGAGAGAGGGTCCAGGAAGAAGAAGGAGAGAAGG
AGGGCTAGGAGGCGTGGATGGGGATATAGGGGATGACGACTTGGCTCAGA
ATGCGGATAGTCGCGAATTGATCGGCTTGGGTTCGGATAACGAGGATGAA
TACGAATTCCAAGATGACGAGGAAGACAAGCACGATGAGACCAATTTCCA
CCTAGGCGAAATGGATGAAGATAGCAGCGAGGAGGAAGAGGAAGAGGAAG
AGGAAGAGGAAGAGAAGGAGGCGGATAGGGCACTGTTGTGTTCCCTGGCC
GAGAGGGAGGAGGACGACGAAGAAGAAGAAGAAGAAGAAGAAGAGAGGAA
GAGACTTGTGGCTGCTTCTGCCGCTGCTCAAGCGACGACATTGACGGCAA
AGGATTTAGCGGCAAGATTCGAAAGGACGCTTGGCAGTGGCGGTGACGGG
GAGAGAGGGGGCAAGGGAGCGAAGCGCAGTGCACCAGGAGGGGATTCTCC
CTCTGTGGCGGCTGCTGTGGAAGGAGGGGAAGGAAGAGGAGGAGGAGCAG
GGGCAGGAGGAAAGAGGGCCAAGGTGACTTTTGCTCCGGGTAGCCTGGAG
AGCGCGGTGAGGGAGCGGTTGGTGGGCTTGGGAGGGCGGGTGACGGGGAA
GGACCTGAGCAGGGAGGTGAAGGACTTGTTGAAGCGGCCGAGCGACGTGG
ACCTGGTTAAGAGGGTGCTGGCACGCATTTCCACCACCGAGATAGACCCC
GTGGATGGGGGAAAAATCTACTCCGTGCGCCCGGAGTACCGGTTGGGTTA
GTCCTGTCCACCTTCCCCCGCTCCCTCCAACCCTCCCTACCCTCCTCCCC
CTTTACTGAGGCGGCCGAGTGACGCGGCGCTTTTGGTGTCAACTGCATGG
GTA back to topprotein sequence of jgi.p|Nanoce1779_2|195514 >mRNA_8407-protein ID=mRNA_8407-protein|Name=jgi.p|Nanoce1779_2|195514|organism=Nannochloropsis oceanica|type=polypeptide|length=272bp
MERSHEEGRKGREGPGRRRREGGLGGVDGDIGDDDLAQNADSRELIGLGS
DNEDEYEFQDDEEDKHDETNFHLGEMDEDSSEEEEEEEEEEEEKEADRAL
LCSLAEREEDDEEEEEEEEERKRLVAASAAAQATTLTAKDLAARFERTLG
SGGDGERGGKGAKRSAPGGDSPSVAAAVEGGEGRGGGAGAGGKRAKVTFA
PGSLESAVRERLVGLGGRVTGKDLSREVKDLLKRPSDVDLVKRVLARIST
TEIDPVDGGKIYSVRPEYRLG* back to topmRNA from alignment at scaffold_24:196231..197386+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8407 ID=mRNA_8407|Name=jgi.p|Nanoce1779_2|195514|organism=Nannochloropsis oceanica|type=mRNA|length=1156bp|location=Sequence derived from alignment at scaffold_24:196231..197386+ (Nannochloropsis oceanica)
CAGGAGGGGGGCTGAGAGGAAGGAAAGGGGTGAAGATGGAACGGAGTCAC
GAGGAAGGGCGGAAGGGGAGAGAGGGTCCAGGAAGAAGAAGGAGAGAAGG
AGGGCTAGGAGGCGTGGATGGGGATATAGGGGATGACGACTTGGCTCAGA
ATGCGGATAGTCGCGAATTGATCGGCTTGGGTTCGGATAACGAGGTAAGT
CAGCCTTCCCTCCCTTCCTCCCTCCCTCCCTCTCTCCCTCCCTCTTTATT
CCTCCCCCTCTCCTTGTTTGTTTCTTAACCCTTTCCACTTGCCGTATGTG
GCGGGGCTTAAAGTCAATTTGTAGAGGGATTTTGTCTTGTGTCATGTCTC
GCTCAACGCCTGTCCATCCTCCCTCCCTCCCCCCCTCCCTCTCTCAGGAT
GAATACGAATTCCAAGATGACGAGGAAGACAAGCACGATGAGACCAATTT
CCACCTAGGCGAAATGGATGAAGATAGCAGCGAGGAGGAAGAGGAAGAGG
AAGAGGAAGAGGAAGAGAAGGAGGCGGATAGGGCACTGTTGTGTTCCCTG
GCCGAGAGGGAGGAGGACGACGAAGAAGAAGAAGAAGAAGAAGAAGAGAG
GAAGAGACTTGTGGCTGCTTCTGCCGCTGCTCAAGCGACGACATTGACGG
CAAAGGATTTAGCGGCAAGATTCGAAAGGACGCTTGGCAGTGGCGGTGAC
GGGGAGAGAGGGGGCAAGGGAGCGAAGCGCAGTGCACCAGGAGGGGATTC
TCCCTCTGTGGCGGCTGCTGTGGAAGGAGGGGAAGGAAGAGGAGGAGGAG
CAGGGGCAGGAGGAAAGAGGGCCAAGGTGACTTTTGCTCCGGGTAGCCTG
GAGAGCGCGGTGAGGGAGCGGTTGGTGGGCTTGGGAGGGCGGGTGACGGG
GAAGGACCTGAGCAGGGAGGTGAAGGACTTGTTGAAGCGGCCGAGCGACG
TGGACCTGGTTAAGAGGGTGCTGGCACGCATTTCCACCACCGAGATAGAC
CCCGTGGATGGGGGAAAAATCTACTCCGTGCGCCCGGAGTACCGGTTGGG
TTAGTCCTGTCCACCTTCCCCCGCTCCCTCCAACCCTCCCTACCCTCCTC
CCCCTTTACTGAGGCGGCCGAGTGACGCGGCGCTTTTGGTGTCAACTGCA
TGGGTA back to topCoding sequence (CDS) from alignment at scaffold_24:196231..197386+ >mRNA_8407 ID=mRNA_8407|Name=jgi.p|Nanoce1779_2|195514|organism=Nannochloropsis oceanica|type=CDS|length=1632bp|location=Sequence derived from alignment at scaffold_24:196231..197386+ (Nannochloropsis oceanica)
ATGGAACGGAGTCACGAGGAAGGGCGGAAGGGGAGAGAGGGTCCAGGAAG
AAGAAGGAGAGAAGGAGGGCTAGGAGGCGTGGATGGGGATATAGGGGATG
ACGACTTGGCTCAGAATGCGGATAGTCGCGAATTGATCGGCTTGGGTTCG
GATAACGAGGATGAATACGAATTCCAAGATGACGAGGAAGACAAGCACGA
TGAGACCAATTTCCACCTAGGCGAAATGGATGAAGATAGCAGCGAGGAGG
AAGAGGAAGAGGAAGAGGAAGAGGAAGAGAAGGAGGCGGATAGGGCACTG
TTGTGTTCCCTGGCCGAGAGGGAGGAGGACGACGAAGAAGAAGAAGAAGA
AGAAGAAGAGAGGAAGAGACTTGTGGCTGCTTCTGCCGCTGCTCAAGCGA
CGACATTGACGGCAAAGGATTTAGCGGCAAGATTCGAAAGGACGCTTGGC
AGTGGCGGTGACGGGGAGAGAGGGGGCAAGGGAGCGAAGCGCAGTGCACC
AGGAGGGGATTCTCCCTCTGTGGCGGCTGCTGTGGAAGGAGGGGAAGGAA
GAGGAGGAGGAGCAGGGGCAGGAGGAAAGAGGGCCAAGGTGACTTTTGCT
CCGGGTAGCCTGGAGAGCGCGGTGAGGGAGCGGTTGGTGGGCTTGGGAGG
GCGGGTGACGGGGAAGGACCTGAGCAGGGAGGTGAAGGACTTGTTGAAGC
GGCCGAGCGACGTGGACCTGGTTAAGAGGGTGCTGGCACGCATTTCCACC
ACCGAGATAGACCCCGTGGATGGGGGAAAAATCTACTCCGTGCGCCCGGA
GTACCGGTTGGGTTAGATGGAACGGAGTCACGAGGAAGGGCGGAAGGGGA
GAGAGGGTCCAGGAAGAAGAAGGAGAGAAGGAGGGCTAGGAGGCGTGGAT
GGGGATATAGGGGATGACGACTTGGCTCAGAATGCGGATAGTCGCGAATT
GATCGGCTTGGGTTCGGATAACGAGGATGAATACGAATTCCAAGATGACG
AGGAAGACAAGCACGATGAGACCAATTTCCACCTAGGCGAAATGGATGAA
GATAGCAGCGAGGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGAAGGA
GGCGGATAGGGCACTGTTGTGTTCCCTGGCCGAGAGGGAGGAGGACGACG
AAGAAGAAGAAGAAGAAGAAGAAGAGAGGAAGAGACTTGTGGCTGCTTCT
GCCGCTGCTCAAGCGACGACATTGACGGCAAAGGATTTAGCGGCAAGATT
CGAAAGGACGCTTGGCAGTGGCGGTGACGGGGAGAGAGGGGGCAAGGGAG
CGAAGCGCAGTGCACCAGGAGGGGATTCTCCCTCTGTGGCGGCTGCTGTG
GAAGGAGGGGAAGGAAGAGGAGGAGGAGCAGGGGCAGGAGGAAAGAGGGC
CAAGGTGACTTTTGCTCCGGGTAGCCTGGAGAGCGCGGTGAGGGAGCGGT
TGGTGGGCTTGGGAGGGCGGGTGACGGGGAAGGACCTGAGCAGGGAGGTG
AAGGACTTGTTGAAGCGGCCGAGCGACGTGGACCTGGTTAAGAGGGTGCT
GGCACGCATTTCCACCACCGAGATAGACCCCGTGGATGGGGGAAAAATCT
ACTCCGTGCGCCCGGAGTACCGGTTGGGTTAG back to top
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