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Properties
| Property Name | Value |
|---|
| TranscriptId | 641816 |
| Track | FilteredModels2 |
| ProteinId | 641730 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_24 | supercontig | scaffold_24:187217..189067 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8403 ID=mRNA_8403|Name=jgi.p|Nanoce1779_2|641730|organism=Nannochloropsis oceanica|type=mRNA|length=714bp
ATGTCCCCTGCGGCTATGTCCATGCTTCAGGGAGCCTCCCCTTGCGACCG
TGCGAGGCCTCGCATTGGATTGCGTGTCCCCCAGAAACTCGCTGCCATCA
CCAAAACGCCTTCAAGCGAGCAGTTTGAGCATCCACTCCATCCCCCGATC
AACATCAACTGGTACGAGTGGTTGACTTGCCGGCGTCTTCTTCAGGAGTG
GAAAGCTGTCGCGTACTCCTCGTCCTCCTCCTCTGCCTCCCCTCATGCGG
TTCCCCGTCCGTTTGTCACTTTGGCCTACGCTCAGAGCCTGGATGGATGC
GTTGCGACGGAAGACAAGAAGCCCACTGCTATCTCAGGTCCCGCGGCCCT
CGTCCTCACTCACGACCTCCGAGCCCTGCATGACTGCATCTTGATCGGTG
CCGGCACCCTCCAATCCGATAACCCTCGATTGAACGTCCGCCTCTCCTCC
TGCACCTCGTGCTGCCTGGTGGACGTATTGAGACAGTTGAAAGAGAAGTG
GGGATATGAGAGGGTCATGGTGGAAGGAGGGGCCGGCGTGCTGACCTCGT
TCCTGGAAGGAGGAGGAGGAGGAGGAGAGCGAGACGGGCTGGTGGATGTG
TGTGTGGTTACGATTGCCCCTTCCTTTGTAGGGAATGGGTATAAGCTTAT
ACAGACCGATGTGGCCCCGGGGAGACGCAGGACAGGGGGAGGGAAGGGCT
CGATGAAGAGGTAA back to topprotein sequence of jgi.p|Nanoce1779_2|641730 >mRNA_8403-protein ID=mRNA_8403-protein|Name=jgi.p|Nanoce1779_2|641730|organism=Nannochloropsis oceanica|type=polypeptide|length=238bp
MSPAAMSMLQGASPCDRARPRIGLRVPQKLAAITKTPSSEQFEHPLHPPI
NINWYEWLTCRRLLQEWKAVAYSSSSSSASPHAVPRPFVTLAYAQSLDGC
VATEDKKPTAISGPAALVLTHDLRALHDCILIGAGTLQSDNPRLNVRLSS
CTSCCLVDVLRQLKEKWGYERVMVEGGAGVLTSFLEGGGGGGERDGLVDV
CVVTIAPSFVGNGYKLIQTDVAPGRRRTGGGKGSMKR* back to topmRNA from alignment at scaffold_24:187217..189067- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8403 ID=mRNA_8403|Name=jgi.p|Nanoce1779_2|641730|organism=Nannochloropsis oceanica|type=mRNA|length=1851bp|location=Sequence derived from alignment at scaffold_24:187217..189067- (Nannochloropsis oceanica)
ATGTCCCCTGCGGCTATGTCCATGCTTCAGGGAGCCTCCCCTTGCGACCG
TGTATGCATAATTATGGGAGTGCTGTTGTGTGGGCGTGGGAAGGAGGGGG
CAAGCATGGCAGCTGCTTGTCCTTTCTCTACGAGCGCTGTCATCTCCTTG
CCTCTTGCACGCGGCGCAAATACGCACATGTCCGCGACTCATCACAGTAC
ACAGAGCATGTCCTTGCTCTCCTCCTCATTCCTCTACAATCACAACATGC
GCTCAGGCGAGGCCTCGCATTGGATTGCGTGTCCCCCAGAAACTCGCTGC
CATCACCAAAACGCCTTCAAGCGAGCAGTTTGAGCATCCACTCCATCCCC
CGATCAACATCAAGTATGCACACAAACAGCATACGTCTCTCCACGACGAC
CATGAGGAGACCATCTGTACCAGGGCTCTTCTCGATTCTCGTGCTCTTCC
TCGTCATGGCAGCCGCTCACGCCATGGAAGTCCCTTCACCCAGCAGCCCA
CTCATGCTCGCCCCGCCACCTCCTCCTCCTCCCTCTTCCTCCTGTCCTCC
CTCCAATCCCCCACCCCACCCTCCTCTCAGCTGGTACGAGTGGTTGACTT
GCCGGCGTCTTCTTCAGGAGTGGAAAGCTGTCGCGTACTCCTCGTCCTCC
TCCTCTGCCTCCCCTCATGCGGTTCCCCGTCCGTTTGTCACTTTGGCCTA
CGCTCAGAGCCTGGATGGATGCGTTGCGACGGAAGACAAGAAGCCCACTG
CTATCTCAGGTAAGGAGAAACACGTATCATACAGAAGTGAAGGAGGGCGT
GCTCTCCGATGATTTGCGGGGGGGGATGCCAATGCCTCTATCTGTAAAAT
TTCACCGAAGCCCTTTCCCACTTCCTCCCTCCCTCCCTCACCGCCCTCCA
TCGAGGTCCCGCGGCCCTCGTCCTCACTCACGACCTCCGAGCCCTGCATG
ACTGCATCTTGATCGGTGCCGGCACCCTCCAATCCGATAACCCTCGATTG
AACGTCCGCCTCTCCTCCTGCACCTCGTCCGCTTGCCCCGTCTCTTCTTC
CTCCCCTCCCTCCTCCTCTTTCCTTTCTACCCTGCTCTCCTTCCTCCTCC
CATCCTCCCCCCTCTCCCCCAACCCGTCTCCTCCTTCTTCCTCCCGCTGT
CGCGATCCTCGTCCCGTCCTTCTCCTTTCCTCGGGCCGAGGCCCCCTCCC
ATTTGACCTTTCCGCTCTCCGTCTTTCCCGCCCTCCCCTCATCTTCACTC
CCTCCCTATCATCCCTCCTTCGGCGCCTCCCCGGTGGCGCCAAGGGAGAA
CTATATCGCTCATTAACTTTGAAAGGATATGAGTTCATTGAGTGTGCCCC
CTCTTCCCTCCCTTCCTCGTCCTCGTTCTCGTCCTCGAGGTGCTGCCTGG
TGGACGTATTGAGACAGTTGAAAGAGAAGTGGGGATATGAGAGGGTCATG
GTGGAAGGAGGGGCCGGCGTGCTGACCTCGTTCCTGGAAGGAGGAGGAGG
AGGAGGAGAGCGAGACGGGCTGGTGGATGTGTGTGTGGTTACGATTGCCC
CTTCCTTTGTAGGGAATGGGTATAAGCTTATACAGACCGATGGTAAGTAT
TATTGTAATATTAAAAGTGAGAGAGGTGAAGTTAAGAAGAAAAATGACAA
GAACAAAATGAACGAGCTAAGAGGCAAAAACGAGGGGGGGGGGGAGAGGG
GTCCCTGGCTGGTACGGCTGGGGGAGGGAGGGAGGAAAGGAGGGGGCTGG
CATGTGCATCGGTTAGGGAGGGACATCGTGGTCGTCGGGCGGCCGCAGTG
GCCCCGGGGAGACGCAGGACAGGGGGAGGGAAGGGCTCGATGAAGAGGTA
A back to topCoding sequence (CDS) from alignment at scaffold_24:187217..189067- >mRNA_8403 ID=mRNA_8403|Name=jgi.p|Nanoce1779_2|641730|organism=Nannochloropsis oceanica|type=CDS|length=4284bp|location=Sequence derived from alignment at scaffold_24:187217..189067- (Nannochloropsis oceanica)
TGGCCCCGGGGAGACGCAGGACAGGGGGAGGGAAGGGCTCGATGAAGAGG
TAAGTGCTGCCTGGTGGACGTATTGAGACAGTTGAAAGAGAAGTGGGGAT
ATGAGAGGGTCATGGTGGAAGGAGGGGCCGGCGTGCTGACCTCGTTCCTG
GAAGGAGGAGGAGGAGGAGGAGAGCGAGACGGGCTGGTGGATGTGTGTGT
GGTTACGATTGCCCCTTCCTTTGTAGGGAATGGGTATAAGCTTATACAGA
CCGATGGTCCCGCGGCCCTCGTCCTCACTCACGACCTCCGAGCCCTGCAT
GACTGCATCTTGATCGGTGCCGGCACCCTCCAATCCGATAACCCTCGATT
GAACGTCCGCCTCTCCTCCTGCACCTCCTGGTACGAGTGGTTGACTTGCC
GGCGTCTTCTTCAGGAGTGGAAAGCTGTCGCGTACTCCTCGTCCTCCTCC
TCTGCCTCCCCTCATGCGGTTCCCCGTCCGTTTGTCACTTTGGCCTACGC
TCAGAGCCTGGATGGATGCGTTGCGACGGAAGACAAGAAGCCCACTGCTA
TCTCAGGCGAGGCCTCGCATTGGATTGCGTGTCCCCCAGAAACTCGCTGC
CATCACCAAAACGCCTTCAAGCGAGCAGTTTGAGCATCCACTCCATCCCC
CGATCAACATCAAATGTCCCCTGCGGCTATGTCCATGCTTCAGGGAGCCT
CCCCTTGCGACCGTTGGCCCCGGGGAGACGCAGGACAGGGGGAGGGAAGG
GCTCGATGAAGAGGTAAGTGCTGCCTGGTGGACGTATTGAGACAGTTGAA
AGAGAAGTGGGGATATGAGAGGGTCATGGTGGAAGGAGGGGCCGGCGTGC
TGACCTCGTTCCTGGAAGGAGGAGGAGGAGGAGGAGAGCGAGACGGGCTG
GTGGATGTGTGTGTGGTTACGATTGCCCCTTCCTTTGTAGGGAATGGGTA
TAAGCTTATACAGACCGATGGTCCCGCGGCCCTCGTCCTCACTCACGACC
TCCGAGCCCTGCATGACTGCATCTTGATCGGTGCCGGCACCCTCCAATCC
GATAACCCTCGATTGAACGTCCGCCTCTCCTCCTGCACCTCCTGGTACGA
GTGGTTGACTTGCCGGCGTCTTCTTCAGGAGTGGAAAGCTGTCGCGTACT
CCTCGTCCTCCTCCTCTGCCTCCCCTCATGCGGTTCCCCGTCCGTTTGTC
ACTTTGGCCTACGCTCAGAGCCTGGATGGATGCGTTGCGACGGAAGACAA
GAAGCCCACTGCTATCTCAGGCGAGGCCTCGCATTGGATTGCGTGTCCCC
CAGAAACTCGCTGCCATCACCAAAACGCCTTCAAGCGAGCAGTTTGAGCA
TCCACTCCATCCCCCGATCAACATCAAATGTCCCCTGCGGCTATGTCCAT
GCTTCAGGGAGCCTCCCCTTGCGACCGTTGGCCCCGGGGAGACGCAGGAC
AGGGGGAGGGAAGGGCTCGATGAAGAGGTAAGTGCTGCCTGGTGGACGTA
TTGAGACAGTTGAAAGAGAAGTGGGGATATGAGAGGGTCATGGTGGAAGG
AGGGGCCGGCGTGCTGACCTCGTTCCTGGAAGGAGGAGGAGGAGGAGGAG
AGCGAGACGGGCTGGTGGATGTGTGTGTGGTTACGATTGCCCCTTCCTTT
GTAGGGAATGGGTATAAGCTTATACAGACCGATGGTCCCGCGGCCCTCGT
CCTCACTCACGACCTCCGAGCCCTGCATGACTGCATCTTGATCGGTGCCG
GCACCCTCCAATCCGATAACCCTCGATTGAACGTCCGCCTCTCCTCCTGC
ACCTCCTGGTACGAGTGGTTGACTTGCCGGCGTCTTCTTCAGGAGTGGAA
AGCTGTCGCGTACTCCTCGTCCTCCTCCTCTGCCTCCCCTCATGCGGTTC
CCCGTCCGTTTGTCACTTTGGCCTACGCTCAGAGCCTGGATGGATGCGTT
GCGACGGAAGACAAGAAGCCCACTGCTATCTCAGGCGAGGCCTCGCATTG
GATTGCGTGTCCCCCAGAAACTCGCTGCCATCACCAAAACGCCTTCAAGC
GAGCAGTTTGAGCATCCACTCCATCCCCCGATCAACATCAAATGTCCCCT
GCGGCTATGTCCATGCTTCAGGGAGCCTCCCCTTGCGACCGTTGGCCCCG
GGGAGACGCAGGACAGGGGGAGGGAAGGGCTCGATGAAGAGGTAAGTGCT
GCCTGGTGGACGTATTGAGACAGTTGAAAGAGAAGTGGGGATATGAGAGG
GTCATGGTGGAAGGAGGGGCCGGCGTGCTGACCTCGTTCCTGGAAGGAGG
AGGAGGAGGAGGAGAGCGAGACGGGCTGGTGGATGTGTGTGTGGTTACGA
TTGCCCCTTCCTTTGTAGGGAATGGGTATAAGCTTATACAGACCGATGGT
CCCGCGGCCCTCGTCCTCACTCACGACCTCCGAGCCCTGCATGACTGCAT
CTTGATCGGTGCCGGCACCCTCCAATCCGATAACCCTCGATTGAACGTCC
GCCTCTCCTCCTGCACCTCCTGGTACGAGTGGTTGACTTGCCGGCGTCTT
CTTCAGGAGTGGAAAGCTGTCGCGTACTCCTCGTCCTCCTCCTCTGCCTC
CCCTCATGCGGTTCCCCGTCCGTTTGTCACTTTGGCCTACGCTCAGAGCC
TGGATGGATGCGTTGCGACGGAAGACAAGAAGCCCACTGCTATCTCAGGC
GAGGCCTCGCATTGGATTGCGTGTCCCCCAGAAACTCGCTGCCATCACCA
AAACGCCTTCAAGCGAGCAGTTTGAGCATCCACTCCATCCCCCGATCAAC
ATCAAATGTCCCCTGCGGCTATGTCCATGCTTCAGGGAGCCTCCCCTTGC
GACCGTTGGCCCCGGGGAGACGCAGGACAGGGGGAGGGAAGGGCTCGATG
AAGAGGTAAGTGCTGCCTGGTGGACGTATTGAGACAGTTGAAAGAGAAGT
GGGGATATGAGAGGGTCATGGTGGAAGGAGGGGCCGGCGTGCTGACCTCG
TTCCTGGAAGGAGGAGGAGGAGGAGGAGAGCGAGACGGGCTGGTGGATGT
GTGTGTGGTTACGATTGCCCCTTCCTTTGTAGGGAATGGGTATAAGCTTA
TACAGACCGATGGTCCCGCGGCCCTCGTCCTCACTCACGACCTCCGAGCC
CTGCATGACTGCATCTTGATCGGTGCCGGCACCCTCCAATCCGATAACCC
TCGATTGAACGTCCGCCTCTCCTCCTGCACCTCCTGGTACGAGTGGTTGA
CTTGCCGGCGTCTTCTTCAGGAGTGGAAAGCTGTCGCGTACTCCTCGTCC
TCCTCCTCTGCCTCCCCTCATGCGGTTCCCCGTCCGTTTGTCACTTTGGC
CTACGCTCAGAGCCTGGATGGATGCGTTGCGACGGAAGACAAGAAGCCCA
CTGCTATCTCAGGCGAGGCCTCGCATTGGATTGCGTGTCCCCCAGAAACT
CGCTGCCATCACCAAAACGCCTTCAAGCGAGCAGTTTGAGCATCCACTCC
ATCCCCCGATCAACATCAAATGTCCCCTGCGGCTATGTCCATGCTTCAGG
GAGCCTCCCCTTGCGACCGTTGGCCCCGGGGAGACGCAGGACAGGGGGAG
GGAAGGGCTCGATGAAGAGGTAAGTGCTGCCTGGTGGACGTATTGAGACA
GTTGAAAGAGAAGTGGGGATATGAGAGGGTCATGGTGGAAGGAGGGGCCG
GCGTGCTGACCTCGTTCCTGGAAGGAGGAGGAGGAGGAGGAGAGCGAGAC
GGGCTGGTGGATGTGTGTGTGGTTACGATTGCCCCTTCCTTTGTAGGGAA
TGGGTATAAGCTTATACAGACCGATGGTCCCGCGGCCCTCGTCCTCACTC
ACGACCTCCGAGCCCTGCATGACTGCATCTTGATCGGTGCCGGCACCCTC
CAATCCGATAACCCTCGATTGAACGTCCGCCTCTCCTCCTGCACCTCCTG
GTACGAGTGGTTGACTTGCCGGCGTCTTCTTCAGGAGTGGAAAGCTGTCG
CGTACTCCTCGTCCTCCTCCTCTGCCTCCCCTCATGCGGTTCCCCGTCCG
TTTGTCACTTTGGCCTACGCTCAGAGCCTGGATGGATGCGTTGCGACGGA
AGACAAGAAGCCCACTGCTATCTCAGGCGAGGCCTCGCATTGGATTGCGT
GTCCCCCAGAAACTCGCTGCCATCACCAAAACGCCTTCAAGCGAGCAGTT
TGAGCATCCACTCCATCCCCCGATCAACATCAAATGTCCCCTGCGGCTAT
GTCCATGCTTCAGGGAGCCTCCCCTTGCGACCGT back to top
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