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Properties
| Property Name | Value |
|---|
| TranscriptId | 641808 |
| Track | FilteredModels2 |
| ProteinId | 641722 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_24 | supercontig | scaffold_24:162239..163483 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8393 ID=mRNA_8393|Name=jgi.p|Nanoce1779_2|641722|organism=Nannochloropsis oceanica|type=mRNA|length=1245bp
ATGCTCACCGGCTTCCTCTCCCTCTTCCCCGGCAGCCCCTCGAGCCCTAA
CCGGCGCGTTCTTAACGACCCGAGCTCCTTCCCTCCCTTCATCCCTCCCT
CCCCCTCCTCCTCCTCTGCCTCTTCCAAAGACATCACAATCACCACCCTC
GCCCAGGACCTGCGCAAGGAAACCCGCCGTTGGCAATCCCTCTTCTTGTC
CGCCGACGGCAAGACCATGGATTACTCTTCCTTGCTGCAAAGCGAGGCCT
TCGTCTCCTATCTCCACCTCACCACACTCCTCGCCTCCGCCCAAGGCATT
GCCTCCCTGTCCCTGAATGAGAGAAAGGCCACGTTTTTGAATCTATACAA
TTGCCTGGTCATTCACGCTATCGCCCTTGACTCCTCGCCCGCACCCTCCA
CCTTCTCCTCTTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCC
TCTTCCTCCTCCTCCTCTTCCGCCCTCTCCCGCACCCCCTTCTTTGCCCA
AACCTGCTACAACGTGAGCGGCCACATCCTCTCCCTCGACGACATGGAGC
ACGGCTTGCTGAGAGGGAACAGACGATCGCCGAACTTCCTTGCCCGTCGC
GCCCTTTTTTCGAAAAGGCATTTCCCGGACTTGCCCTCCCTCCCCCCATC
CTCCACCTCATCATCCTCCTCTCCCTCCTCCGCCACCACCTCATCCTCCC
TCGCCTCCTGGATTGTCCCCTTAGACCCTCGCATCCACTTCGCCTTGAAC
TGTGGCGCGATATCCTGTCCAGCCATTCGGTTTTATGAGGGAGGGAAGGA
GGGAAGGGGGGTGTCAGGGAAAGTAGAAGGAAGGGGAGGAGGAAGTGAGG
GAGGGAGGGATTCAAGTGCTGGAGGTAAGACGCAAGGCCTCTTGAGATTA
ATGGAGGGAGGAATGGAGGGAGGGCAGGATAGGTTGGACGAGCAGCTGGA
TGCCGCGGCCAGGACATTTTTTGCCGGAGTCTGTGTGGAGAGAGAGGGAG
GGAGGGAGGGAGGGAGGGAAAGAGGGAGAGTAGTGGTGCACTTGAGCAAG
ATTTGTGATTGGTACAAAAGTGATTTTGCGGAGGGGGAGGAAGGGAGGGG
AGGGGAGGAGGAAAGGATGTTGCGTAGGGTTTTGCAGTGGTTTCCCGAGG
AGGCACGGAGGGAGGTGGAGGGAGGGAGTGGGGGAGGGAGGGAGGTCAAG
GTGGAGTATTTGCCGTATGATTGGGGAGTAAATATGAAGAAGTAA back to topprotein sequence of jgi.p|Nanoce1779_2|641722 >mRNA_8393-protein ID=mRNA_8393-protein|Name=jgi.p|Nanoce1779_2|641722|organism=Nannochloropsis oceanica|type=polypeptide|length=415bp
MLTGFLSLFPGSPSSPNRRVLNDPSSFPPFIPPSPSSSSASSKDITITTL
AQDLRKETRRWQSLFLSADGKTMDYSSLLQSEAFVSYLHLTTLLASAQGI
ASLSLNERKATFLNLYNCLVIHAIALDSSPAPSTFSSSSSSSSSSSSSSS
SSSSSSSALSRTPFFAQTCYNVSGHILSLDDMEHGLLRGNRRSPNFLARR
ALFSKRHFPDLPSLPPSSTSSSSSPSSATTSSSLASWIVPLDPRIHFALN
CGAISCPAIRFYEGGKEGRGVSGKVEGRGGGSEGGRDSSAGGKTQGLLRL
MEGGMEGGQDRLDEQLDAAARTFFAGVCVEREGGREGGRERGRVVVHLSK
ICDWYKSDFAEGEEGRGGEEERMLRRVLQWFPEEARREVEGGSGGGREVK
VEYLPYDWGVNMKK* back to topmRNA from alignment at scaffold_24:162239..163483- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8393 ID=mRNA_8393|Name=jgi.p|Nanoce1779_2|641722|organism=Nannochloropsis oceanica|type=mRNA|length=1245bp|location=Sequence derived from alignment at scaffold_24:162239..163483- (Nannochloropsis oceanica)
ATGCTCACCGGCTTCCTCTCCCTCTTCCCCGGCAGCCCCTCGAGCCCTAA
CCGGCGCGTTCTTAACGACCCGAGCTCCTTCCCTCCCTTCATCCCTCCCT
CCCCCTCCTCCTCCTCTGCCTCTTCCAAAGACATCACAATCACCACCCTC
GCCCAGGACCTGCGCAAGGAAACCCGCCGTTGGCAATCCCTCTTCTTGTC
CGCCGACGGCAAGACCATGGATTACTCTTCCTTGCTGCAAAGCGAGGCCT
TCGTCTCCTATCTCCACCTCACCACACTCCTCGCCTCCGCCCAAGGCATT
GCCTCCCTGTCCCTGAATGAGAGAAAGGCCACGTTTTTGAATCTATACAA
TTGCCTGGTCATTCACGCTATCGCCCTTGACTCCTCGCCCGCACCCTCCA
CCTTCTCCTCTTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCC
TCTTCCTCCTCCTCCTCTTCCGCCCTCTCCCGCACCCCCTTCTTTGCCCA
AACCTGCTACAACGTGAGCGGCCACATCCTCTCCCTCGACGACATGGAGC
ACGGCTTGCTGAGAGGGAACAGACGATCGCCGAACTTCCTTGCCCGTCGC
GCCCTTTTTTCGAAAAGGCATTTCCCGGACTTGCCCTCCCTCCCCCCATC
CTCCACCTCATCATCCTCCTCTCCCTCCTCCGCCACCACCTCATCCTCCC
TCGCCTCCTGGATTGTCCCCTTAGACCCTCGCATCCACTTCGCCTTGAAC
TGTGGCGCGATATCCTGTCCAGCCATTCGGTTTTATGAGGGAGGGAAGGA
GGGAAGGGGGGTGTCAGGGAAAGTAGAAGGAAGGGGAGGAGGAAGTGAGG
GAGGGAGGGATTCAAGTGCTGGAGGTAAGACGCAAGGCCTCTTGAGATTA
ATGGAGGGAGGAATGGAGGGAGGGCAGGATAGGTTGGACGAGCAGCTGGA
TGCCGCGGCCAGGACATTTTTTGCCGGAGTCTGTGTGGAGAGAGAGGGAG
GGAGGGAGGGAGGGAGGGAAAGAGGGAGAGTAGTGGTGCACTTGAGCAAG
ATTTGTGATTGGTACAAAAGTGATTTTGCGGAGGGGGAGGAAGGGAGGGG
AGGGGAGGAGGAAAGGATGTTGCGTAGGGTTTTGCAGTGGTTTCCCGAGG
AGGCACGGAGGGAGGTGGAGGGAGGGAGTGGGGGAGGGAGGGAGGTCAAG
GTGGAGTATTTGCCGTATGATTGGGGAGTAAATATGAAGAAGTAA back to topCoding sequence (CDS) from alignment at scaffold_24:162239..163483- >mRNA_8393 ID=mRNA_8393|Name=jgi.p|Nanoce1779_2|641722|organism=Nannochloropsis oceanica|type=CDS|length=1245bp|location=Sequence derived from alignment at scaffold_24:162239..163483- (Nannochloropsis oceanica)
ATGCTCACCGGCTTCCTCTCCCTCTTCCCCGGCAGCCCCTCGAGCCCTAA
CCGGCGCGTTCTTAACGACCCGAGCTCCTTCCCTCCCTTCATCCCTCCCT
CCCCCTCCTCCTCCTCTGCCTCTTCCAAAGACATCACAATCACCACCCTC
GCCCAGGACCTGCGCAAGGAAACCCGCCGTTGGCAATCCCTCTTCTTGTC
CGCCGACGGCAAGACCATGGATTACTCTTCCTTGCTGCAAAGCGAGGCCT
TCGTCTCCTATCTCCACCTCACCACACTCCTCGCCTCCGCCCAAGGCATT
GCCTCCCTGTCCCTGAATGAGAGAAAGGCCACGTTTTTGAATCTATACAA
TTGCCTGGTCATTCACGCTATCGCCCTTGACTCCTCGCCCGCACCCTCCA
CCTTCTCCTCTTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCC
TCTTCCTCCTCCTCCTCTTCCGCCCTCTCCCGCACCCCCTTCTTTGCCCA
AACCTGCTACAACGTGAGCGGCCACATCCTCTCCCTCGACGACATGGAGC
ACGGCTTGCTGAGAGGGAACAGACGATCGCCGAACTTCCTTGCCCGTCGC
GCCCTTTTTTCGAAAAGGCATTTCCCGGACTTGCCCTCCCTCCCCCCATC
CTCCACCTCATCATCCTCCTCTCCCTCCTCCGCCACCACCTCATCCTCCC
TCGCCTCCTGGATTGTCCCCTTAGACCCTCGCATCCACTTCGCCTTGAAC
TGTGGCGCGATATCCTGTCCAGCCATTCGGTTTTATGAGGGAGGGAAGGA
GGGAAGGGGGGTGTCAGGGAAAGTAGAAGGAAGGGGAGGAGGAAGTGAGG
GAGGGAGGGATTCAAGTGCTGGAGGTAAGACGCAAGGCCTCTTGAGATTA
ATGGAGGGAGGAATGGAGGGAGGGCAGGATAGGTTGGACGAGCAGCTGGA
TGCCGCGGCCAGGACATTTTTTGCCGGAGTCTGTGTGGAGAGAGAGGGAG
GGAGGGAGGGAGGGAGGGAAAGAGGGAGAGTAGTGGTGCACTTGAGCAAG
ATTTGTGATTGGTACAAAAGTGATTTTGCGGAGGGGGAGGAAGGGAGGGG
AGGGGAGGAGGAAAGGATGTTGCGTAGGGTTTTGCAGTGGTTTCCCGAGG
AGGCACGGAGGGAGGTGGAGGGAGGGAGTGGGGGAGGGAGGGAGGTCAAG
GTGGAGTATTTGCCGTATGATTGGGGAGTAAATATGAAGAAGTAA back to top
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