Properties
Property Name | Value |
TranscriptId | 601933 |
Track | FilteredModels2 |
ProteinId | 601847 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_24 | supercontig | scaffold_24:144747..146077 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8386 ID=mRNA_8386|Name=jgi.p|Nanoce1779_2|601847|organism=Nannochloropsis oceanica|type=mRNA|length=1148bp ACAGCTGCCTAGCCCACCCGTCCGAAGATCATGGCTGTGTCATCCTGGTC GTCCTCGATAACCTCCTCCCTTGCCTCCTTTCTTCCTTCTTCGGCCACCG ATGCGGCAACTGCCACGCTGGCCTGGTTCACGGGCACACACCCTACACCT CCACCACCACCTATAGATACAAGTGCGAGGGTCGAGCTGGTCATGAGTTT GATTCTCCTGGCGCAATTGGCCCTTTTGCTATTGATCTTTCAATTTTTGA CGCCGGTCAAGGGAGGCGTCGGGCGGTGGCTGCCTCCACCTGAGACGGAC AAAGGCGCTTACGAACGCTTTGTCTTGACCTACACCCCCGTATGGATTGG TGTCTTTGCTGTCATTATCGCTGGACAACTCTACGAGTCTTTCACCGCTA ACACTTATATGCTTGTTTGTGCCGGATTATGCGTCCCCCTTTTTCTCTAT GCTGTCCTCGCCCCCTCCCTGCCTCCTCATGTCCCTCCAAGTGATGCACT AGCCGGATCATCCTCCTTCTTCGAGCGGTACCCATTCAAGGCGTCGGTTT GGTTAGCGATTTACTCGCATATCGGCAATTATTGGTACACACATTACTTT TACGCGGTCCTTAAAGCCTCCTACAGCATGCCGTCCTTCCGCCTGAACGA TGTGCCCTTGCCTCTATACTTCGCGACGTTTTTCTACTTCTCGACCTACC ACATCCTGTCGAATGTATTGCTACGACGAGTGTGTACTGGGTATGCACCT AACATTTTCCGCTCCATCTTTCTGGTGTGCTTGGTGGTGGTTTTGAGCTA CTTCACTGCGTTCACTGAGACATTAACAATCAGCTCGTTCCCCTACTATT CGTTTGAAAATCCGTTCATGGCCATGACCGTGGGAAGTGCATTTTATGGA ATTTATTTTCTGGTAAGCTTTCCGGCGTTCTTCCGACTGGATGAGTGGGA GGGGGCGAGGTTGAGTCTGTATCAGACAGGAATGGATTCTCTGGGTGCAG GGATGTTGATTCTCATATTGTTGGATGCCGTCAGGCTGTGCTTGGCGATT CCTCTGACGATCAAAGGGTAGGGGTATCACTGTTGTTCACGATAATACGA GGATGTTTACATGCATGTAAAAGGAATTAAAAATACTCTATTCTTTCC back to topprotein sequence of jgi.p|Nanoce1779_2|601847 >mRNA_8386-protein ID=mRNA_8386-protein|Name=jgi.p|Nanoce1779_2|601847|organism=Nannochloropsis oceanica|type=polypeptide|length=347bp MAVSSWSSSITSSLASFLPSSATDAATATLAWFTGTHPTPPPPPIDTSAR VELVMSLILLAQLALLLLIFQFLTPVKGGVGRWLPPPETDKGAYERFVLT YTPVWIGVFAVIIAGQLYESFTANTYMLVCAGLCVPLFLYAVLAPSLPPH VPPSDALAGSSSFFERYPFKASVWLAIYSHIGNYWYTHYFYAVLKASYSM PSFRLNDVPLPLYFATFFYFSTYHILSNVLLRRVCTGYAPNIFRSIFLVC LVVVLSYFTAFTETLTISSFPYYSFENPFMAMTVGSAFYGIYFLVSFPAF FRLDEWEGARLSLYQTGMDSLGAGMLILILLDAVRLCLAIPLTIKG* back to topmRNA from alignment at scaffold_24:144747..146077- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8386 ID=mRNA_8386|Name=jgi.p|Nanoce1779_2|601847|organism=Nannochloropsis oceanica|type=mRNA|length=1331bp|location=Sequence derived from alignment at scaffold_24:144747..146077- (Nannochloropsis oceanica) ACAGCTGCCTAGCCCACCCGTCCGAAGATCATGGCTGTGTCATCCTGGTC
GTCCTCGATAACCTCCTCCCTTGCCTCCTTTCTTCCTTCTTCGGCCACCG
ATGCGGCAACTGCCACGCTGGCCTGGTTCACGGGCACACACCCTACACCT
CCACCACCACCTATAGATACAAGTGCGAGGGTCGAGCTGGTCATGAGTTT
GATTCTCCTGGCGCAATTGGCCCTTTTGCTATTGATCTTTCAATTTTTGA
CGCCGGTCAAGGGAGGCGTCGGGCGGTGGCTGCCTCCACCTGAGACGGAC
AAAGGTACATGTATATTTGTGCGTGCTTGAAGCAGGAAAAAAAGGAAGAG
CGAGACAAGCTTCTCGTAATGAAAGTAGAGCTTTGATGCACGCATTCTGC
GAATCCCACCTACCCAGCTCCCTTATCCTCCCTTCCCTCCCTTCCCTCCC
TCATCCCCCCTCATCCCTCTCCTTTCGCTCATAACAGGCGCTTACGAACG
CTTTGTCTTGACCTACACCCCCGTATGGATTGGTGTCTTTGCTGTCATTA
TCGCTGGACAACTCTACGAGTCTTTCACCGCTAACACTTATATGCTTGTT
TGTGCCGGATTATGCGTCCCCCTTTTTCTCTATGCTGTCCTCGCCCCCTC
CCTGCCTCCTCATGTCCCTCCAAGTGATGCACTAGCCGGATCATCCTCCT
TCTTCGAGCGGTACCCATTCAAGGCGTCGGTTTGGTTAGCGATTTACTCG
CATATCGGCAATTATTGGTACACACATTACTTTTACGCGGTCCTTAAAGC
CTCCTACAGCATGCCGTCCTTCCGCCTGAACGATGTGCCCTTGCCTCTAT
ACTTCGCGACGTTTTTCTACTTCTCGACCTACCACATCCTGTCGAATGTA
TTGCTACGACGAGTGTGTACTGGGTATGCACCTAACATTTTCCGCTCCAT
CTTTCTGGTGTGCTTGGTGGTGGTTTTGAGCTACTTCACTGCGTTCACTG
AGACATTAACAATCAGCTCGTTCCCCTACTATTCGTTTGAAAATCCGTTC
ATGGCCATGACCGTGGGAAGTGCATTTTATGGAATTTATTTTCTGGTAAG
CTTTCCGGCGTTCTTCCGACTGGATGAGTGGGAGGGGGCGAGGTTGAGTC
TGTATCAGACAGGAATGGATTCTCTGGGTGCAGGGATGTTGATTCTCATA
TTGTTGGATGCCGTCAGGCTGTGCTTGGCGATTCCTCTGACGATCAAAGG
GTAGGGGTATCACTGTTGTTCACGATAATACGAGGATGTTTACATGCATG
TAAAAGGAATTAAAAATACTCTATTCTTTCC back to topCoding sequence (CDS) from alignment at scaffold_24:144747..146077- >mRNA_8386 ID=mRNA_8386|Name=jgi.p|Nanoce1779_2|601847|organism=Nannochloropsis oceanica|type=CDS|length=2082bp|location=Sequence derived from alignment at scaffold_24:144747..146077- (Nannochloropsis oceanica) GCGCTTACGAACGCTTTGTCTTGACCTACACCCCCGTATGGATTGGTGTC TTTGCTGTCATTATCGCTGGACAACTCTACGAGTCTTTCACCGCTAACAC TTATATGCTTGTTTGTGCCGGATTATGCGTCCCCCTTTTTCTCTATGCTG TCCTCGCCCCCTCCCTGCCTCCTCATGTCCCTCCAAGTGATGCACTAGCC GGATCATCCTCCTTCTTCGAGCGGTACCCATTCAAGGCGTCGGTTTGGTT AGCGATTTACTCGCATATCGGCAATTATTGGTACACACATTACTTTTACG CGGTCCTTAAAGCCTCCTACAGCATGCCGTCCTTCCGCCTGAACGATGTG CCCTTGCCTCTATACTTCGCGACGTTTTTCTACTTCTCGACCTACCACAT CCTGTCGAATGTATTGCTACGACGAGTGTGTACTGGGTATGCACCTAACA TTTTCCGCTCCATCTTTCTGGTGTGCTTGGTGGTGGTTTTGAGCTACTTC ACTGCGTTCACTGAGACATTAACAATCAGCTCGTTCCCCTACTATTCGTT TGAAAATCCGTTCATGGCCATGACCGTGGGAAGTGCATTTTATGGAATTT ATTTTCTGGTAAGCTTTCCGGCGTTCTTCCGACTGGATGAGTGGGAGGGG GCGAGGTTGAGTCTGTATCAGACAGGAATGGATTCTCTGGGTGCAGGGAT GTTGATTCTCATATTGTTGGATGCCGTCAGGCTGTGCTTGGCGATTCCTC TGACGATCAAAGGGTAGATGGCTGTGTCATCCTGGTCGTCCTCGATAACC TCCTCCCTTGCCTCCTTTCTTCCTTCTTCGGCCACCGATGCGGCAACTGC CACGCTGGCCTGGTTCACGGGCACACACCCTACACCTCCACCACCACCTA TAGATACAAGTGCGAGGGTCGAGCTGGTCATGAGTTTGATTCTCCTGGCG CAATTGGCCCTTTTGCTATTGATCTTTCAATTTTTGACGCCGGTCAAGGG AGGCGTCGGGCGGTGGCTGCCTCCACCTGAGACGGACAAAGGCGCTTACG AACGCTTTGTCTTGACCTACACCCCCGTATGGATTGGTGTCTTTGCTGTC ATTATCGCTGGACAACTCTACGAGTCTTTCACCGCTAACACTTATATGCT TGTTTGTGCCGGATTATGCGTCCCCCTTTTTCTCTATGCTGTCCTCGCCC CCTCCCTGCCTCCTCATGTCCCTCCAAGTGATGCACTAGCCGGATCATCC TCCTTCTTCGAGCGGTACCCATTCAAGGCGTCGGTTTGGTTAGCGATTTA CTCGCATATCGGCAATTATTGGTACACACATTACTTTTACGCGGTCCTTA AAGCCTCCTACAGCATGCCGTCCTTCCGCCTGAACGATGTGCCCTTGCCT CTATACTTCGCGACGTTTTTCTACTTCTCGACCTACCACATCCTGTCGAA TGTATTGCTACGACGAGTGTGTACTGGGTATGCACCTAACATTTTCCGCT CCATCTTTCTGGTGTGCTTGGTGGTGGTTTTGAGCTACTTCACTGCGTTC ACTGAGACATTAACAATCAGCTCGTTCCCCTACTATTCGTTTGAAAATCC GTTCATGGCCATGACCGTGGGAAGTGCATTTTATGGAATTTATTTTCTGG TAAGCTTTCCGGCGTTCTTCCGACTGGATGAGTGGGAGGGGGCGAGGTTG AGTCTGTATCAGACAGGAATGGATTCTCTGGGTGCAGGGATGTTGATTCT CATATTGTTGGATGCCGTCAGGCTGTGCTTGGCGATTCCTCTGACGATCA AAGGGTAGATGGCTGTGTCATCCTGGTCGTCCTCGATAACCTCCTCCCTT GCCTCCTTTCTTCCTTCTTCGGCCACCGATGCGGCAACTGCCACGCTGGC CTGGTTCACGGGCACACACCCTACACCTCCACCACCACCTATAGATACAA GTGCGAGGGTCGAGCTGGTCATGAGTTTGATTCTCCTGGCGCAATTGGCC CTTTTGCTATTGATCTTTCAATTTTTGACGCCGGTCAAGGGAGGCGTCGG GCGGTGGCTGCCTCCACCTGAGACGGACAAAG back to top
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