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Properties
| Property Name | Value |
|---|
| TranscriptId | 601910 |
| Track | FilteredModels2 |
| ProteinId | 601824 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_24 | supercontig | scaffold_24:126498..129136 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8380 ID=mRNA_8380|Name=jgi.p|Nanoce1779_2|601824|organism=Nannochloropsis oceanica|type=mRNA|length=2342bp
CAATAGACCGCGTTCCATTTCCCCCCTCATTCACACACAGAGCATCAAGA
TCACCACTAGAAGCCTATACTGGCAGCGATATAAAACCCAAAGCGTCTTC
GTCGCCCAACATCCCGACTCTCAGACCCTGCATCACACCATGCACGAGGA
CCATCCACACTCATCGCTGCCGTCATCGTTTAGTGGAGAATCACAAGCGT
CAGCCTCCGGGCCTCCGGTGACAGACCTTGAGGACTTCGGCTCCGTGGAG
GTCACGAACCGATGCTGCGGAGCCATGACTTGCCGCGTCTTGGCCCCAGA
TATCTTCCTGGAAGCCAAGCAAGGCAGCGGTCCGTCAGATACCTCAACGG
CTGATAGCATCGTGCCTACTAAAAACTTTACGTACGTTGGACGGAAGATC
AAGAATGAGGACGAGCTGCGCCAGGTTCGACGGGCCGTCAAAGCTTGTCC
TTTTCATGCTCTGCGCTTGCGACGTGGCTCAAAAGGCACGACAGTGATGC
AAGGGGACGTGAATGATGCATACCCCTTGCCAATAGGTCCGCACGGTGAG
GTGTTTTTGCTTGGATACTACACTCCTAAGAATGCGGGAGCTTCTTGTTA
CTTGATTGTCCGCCCGAAGGGCGGTAATGTCTTGATCGATGCCCCATTGC
CGGATGCAAGCCTCCTGGAGCGAATCAGAAACTTGGGGGAGGTAAGCTAT
CTGGTATTTACTCACAAGGACCACACGGCGTTTCATCGTGAGTGGTTTCA
GGCCTTGCCGGGCGTGCAGCGGGTCATACATGTGGACGATGTGGTGCAGG
AGAGGAAGCACTTTTTTTTCCCATACACTGGCGAATTGGAGATGAAAATT
GCGGGTAGCAAAAGTTTTTCACTCGATAATGAAGGTGACGTTTTGCTAAT
CCCCATTCCAGGGCACACACCCGGTAGCCTCGCGATTCTCTATCGCAACC
ACTACCTCTTTACGGGGGACTCCCTCCACTACTCCCGCCCACGTGGACAC
CTCGTCTCCTCACGCTTGCACTGCTGGTCCGATTGGGAACAACAACAAAA
GAGCCTGAAGGCCCTCGAGGAATATGATTGGCTACACATTCTGCCGGGGC
ATGGGGACCCGAAAGAATTTGAAAATTTGAAAGAGGGGAAAATGTCGTTA
CGGCAAGGGTTGGGTTGGATGGAGGAGCAGCCAAGAGGGTACACAAGCAT
GGGCCGTTTCATACCGTGGTTGCAACTGAAGACAAATAATGCAGGGATGC
TGGGAAAGGTACCGCGATGGGTACGCAAGGGGATGGAGTGGGTGGTCGCT
CCTGTGGGGGCCCCGGGAACGAGGGACAGGGCGAGGGTGTGGGAATGGAT
GAGGTACGCCTTTTTTGCATGGTTGGTGCTGAAGCTGTGGCTGCGGGTGC
TTGCGTGATGAGGGAGAATACGGGATCGCCGGTGGATCCGGACACACCGG
CGACGGTTGTCTGTCGCTTTTGCTGGTTGTTTTATCCCCGTGTTTATGTG
TGTGTTTATGCCACACACGCCATGAGCGTGAAATATAACGGAGCATAAAA
GGGACGAGGCCGAGATTCGTTCGTATGGACAAGAGTCTGTTGTACATGAA
AGGGATACCATGATAGAATCATGGAATTAAAATATGGAGACGAAGGAAAA
TAAAGGCAGAAGGCATCTACCGTGTGTCCAAAGCGCTGTAGAAAAAGGGA
AGAAAGACGTAAATAAGATACATGGGCCCGGTTGGGAACCACTTTATTTT
GCCGATGTATGCCTATTGGTCCTCTCTGGTCGTCGGAGCTTTAATCCCTT
CTCGTTTATTACAGGCAGTAGCTGTTGCTTTCTTTTCTTTTTAATTGAAC
TTTCTTCCCTTCTTTTATCCTCTTCATCTTCGCTAGCGCTTCTTCGGTCC
CATATCCCCTCAAAACTCATATACATACATATATACATACACACGCAAAC
ACCGACCCTCCGAATAAATAACGATAAGCGCGTGGACAAGTGAAAGGTCA
CGGGGAAGCTTAGCATCATCTCTTTCTCTTCGAAGATGACTTTTAGTTCG
ATTCGTCTATGACAGCTACTGTTGCTGCTGCTGCGGCTCCATCACCACCA
CCACCACTCCTCCCTCCTTGCACCTTCCCTTTGCCTTCACCCACCTTCAA
TAACGAGGACGGTGACGAGGACAGCGAGGAGGACGCAACCGTGGAGAAAG
ATGAAAGCAATGCTTCAATATTCTCCAAGGCCCTCTGCACCCCTTCCATC
ATCAACCTTTCCTCCCCCTCGCCCTCCCTCCCTTCCTCCCCTTCGAGGGC
ATCCCTGCCCGCCAGCTTCTTTGCAAGTGCTATCTGTTGCCA back to topprotein sequence of jgi.p|Nanoce1779_2|601824 >mRNA_8380-protein ID=mRNA_8380-protein|Name=jgi.p|Nanoce1779_2|601824|organism=Nannochloropsis oceanica|type=polypeptide|length=423bp
MHEDHPHSSLPSSFSGESQASASGPPVTDLEDFGSVEVTNRCCGAMTCRV
LAPDIFLEAKQGSGPSDTSTADSIVPTKNFTYVGRKIKNEDELRQVRRAV
KACPFHALRLRRGSKGTTVMQGDVNDAYPLPIGPHGEVFLLGYYTPKNAG
ASCYLIVRPKGGNVLIDAPLPDASLLERIRNLGEVSYLVFTHKDHTAFHR
EWFQALPGVQRVIHVDDVVQERKHFFFPYTGELEMKIAGSKSFSLDNEGD
VLLIPIPGHTPGSLAILYRNHYLFTGDSLHYSRPRGHLVSSRLHCWSDWE
QQQKSLKALEEYDWLHILPGHGDPKEFENLKEGKMSLRQGLGWMEEQPRG
YTSMGRFIPWLQLKTNNAGMLGKVPRWVRKGMEWVVAPVGAPGTRDRARV
WEWMRYAFFAWLVLKLWLRVLA* back to topmRNA from alignment at scaffold_24:126498..129136- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8380 ID=mRNA_8380|Name=jgi.p|Nanoce1779_2|601824|organism=Nannochloropsis oceanica|type=mRNA|length=2639bp|location=Sequence derived from alignment at scaffold_24:126498..129136- (Nannochloropsis oceanica)
CAATAGACCGCGTTCCATTTCCCCCCTCATTCACACACAGAGCATCAAGA
TCACCACTAGAAGCCTATACTGGCAGCGATATAAAACCCAAAGCGTCTTC
GTCGCGTGAGTGATTTGTCTGTACATCTCGCATCATCATCGAGGCAGTAG
ACCCATCGATCGACGTACTTAAAATTTTGCACCCCGTACCACACAACCGC
ACAGCCAACATCCCGACTCTCAGACCCTGCATCACACCATGCACGAGGAC
CATCCACACTCATCGCTGCCGTCATCGTTTAGTGGAGAATCACAAGCGTC
AGCCTCCGGGCCTCCGGTGACAGACCTTGAGGACTTCGGCTCCGTGGAGG
TCACGAACCGATGCTGCGGAGCCATGACTTGCCGCGTCTTGGCCCCAGAT
ATCTTCCTGGAAGCCAAGCAAGGCAGCGGTCCGTCAGATACCTCAACGGC
TGATAGCATCGTGCCTACTAAAAACTTTACGTACGTTGGACGGAAGATCA
AGAATGAGGACGAGCTGCGCCAGGTTCGACGGGCCGTCAAAGCTTGTCCT
TTTCATGCTCTGCGCTTGCGACGTGGCTCAAAAGGCACGACAGTGATGCA
AGGGGACGTGAATGATGCATACCCCTTGCCAATAGGTCCGCACGGTGAGG
TGTTTTTGCTTGGATACTACACTCCTAAGAATGCGGGAGCTTCTTGTTAC
TTGATTGTCCGCCCGAAGGGCGGTAATGTCTTGATCGATGCCCCATTGCC
GGATGCAAGCCTCCTGGAGCGAATCAGAAACTTGGGGGAGGTAAGCTATC
TGGTATTTACTCACAAGGACCACACGGCGTTTCATCGTGAGTGGTTTCAG
GCCTTGCCGGGCGTGCAGCGGGTCATACATGTGGACGATGTGGTGCAGGA
GAGGAAGCACTTTTTTTTCCCATACACTGGCGAATTGGAGATGAAAATTG
GTACGTTTTGACACAGCATTATAAGGAAGAGAATAAGGAGGAGGAGACGT
TGAATAGAAATTTTGTCCTTGCTCGGAATAGGATGTCGTCAAAGCAGCAC
TAACAGGAATTTTTTAACACATACACACACAAGCACATACTCACTCTCCC
CTTTACTCTCCACCACCACCATCATCACACCTTAAACACATAACACAGCG
GGTAGCAAAAGTTTTTCACTCGATAATGAAGGTGACGTTTTGCTAATCCC
CATTCCAGGGCACACACCCGGTAGCCTCGCGATTCTCTATCGCAACCACT
ACCTCTTTACGGGGGACTCCCTCCACTACTCCCGCCCACGTGGACACCTC
GTCTCCTCACGCTTGCACTGCTGGTCCGATTGGGAACAACAACAAAAGAG
CCTGAAGGCCCTCGAGGAATATGATTGGCTACACATTCTGCCGGGGCATG
GGGACCCGAAAGAATTTGAAAATTTGAAAGAGGGGAAAATGTCGTTACGG
CAAGGGTTGGGTTGGATGGAGGAGCAGCCAAGAGGGTACACAAGCATGGG
CCGTTTCATACCGTGGTTGCAACTGAAGACAAATAATGCAGGGATGCTGG
GAAAGGTACCGCGATGGGTACGCAAGGGGATGGAGTGGGTGGTCGCTCCT
GTGGGGGCCCCGGGAACGAGGGACAGGGCGAGGGTGTGGGAATGGATGAG
GTACGCCTTTTTTGCATGGTTGGTGCTGAAGCTGTGGCTGCGGGTGCTTG
CGTGATGAGGGAGAATACGGGATCGCCGGTGGATCCGGACACACCGGCGA
CGGTTGTCTGTCGCTTTTGCTGGTTGTTTTATCCCCGTGTTTATGTGTGT
GTTTATGCCACACACGCCATGAGCGTGAAATATAACGGAGCATAAAAGGG
ACGAGGCCGAGATTCGTTCGTATGGACAAGAGTCTGTTGTACATGAAAGG
GATACCATGATAGAATCATGGAATTAAAATATGGAGACGAAGGAAAATAA
AGGCAGAAGGCATCTACCGTGTGTCCAAAGCGCTGTAGAAAAAGGGAAGA
AAGACGTAAATAAGATACATGGGCCCGGTTGGGAACCACTTTATTTTGCC
GATGTATGCCTATTGGTCCTCTCTGGTCGTCGGAGCTTTAATCCCTTCTC
GTTTATTACAGGCAGTAGCTGTTGCTTTCTTTTCTTTTTAATTGAACTTT
CTTCCCTTCTTTTATCCTCTTCATCTTCGCTAGCGCTTCTTCGGTCCCAT
ATCCCCTCAAAACTCATATACATACATATATACATACACACGCAAACACC
GACCCTCCGAATAAATAACGATAAGCGCGTGGACAAGTGAAAGGTCACGG
GGAAGCTTAGCATCATCTCTTTCTCTTCGAAGATGACTTTTAGTTCGATT
CGTCTATGACAGCTACTGTTGCTGCTGCTGCGGCTCCATCACCACCACCA
CCACTCCTCCCTCCTTGCACCTTCCCTTTGCCTTCACCCACCTTCAATAA
CGAGGACGGTGACGAGGACAGCGAGGAGGACGCAACCGTGGAGAAAGATG
AAAGCAATGCTTCAATATTCTCCAAGGCCCTCTGCACCCCTTCCATCATC
AACCTTTCCTCCCCCTCGCCCTCCCTCCCTTCCTCCCCTTCGAGGGCATC
CCTGCCCGCCAGCTTCTTTGCAAGTGCTATCTGTTGCCA back to topCoding sequence (CDS) from alignment at scaffold_24:126498..129136- >mRNA_8380 ID=mRNA_8380|Name=jgi.p|Nanoce1779_2|601824|organism=Nannochloropsis oceanica|type=CDS|length=2538bp|location=Sequence derived from alignment at scaffold_24:126498..129136- (Nannochloropsis oceanica)
CGGGTAGCAAAAGTTTTTCACTCGATAATGAAGGTGACGTTTTGCTAATC
CCCATTCCAGGGCACACACCCGGTAGCCTCGCGATTCTCTATCGCAACCA
CTACCTCTTTACGGGGGACTCCCTCCACTACTCCCGCCCACGTGGACACC
TCGTCTCCTCACGCTTGCACTGCTGGTCCGATTGGGAACAACAACAAAAG
AGCCTGAAGGCCCTCGAGGAATATGATTGGCTACACATTCTGCCGGGGCA
TGGGGACCCGAAAGAATTTGAAAATTTGAAAGAGGGGAAAATGTCGTTAC
GGCAAGGGTTGGGTTGGATGGAGGAGCAGCCAAGAGGGTACACAAGCATG
GGCCGTTTCATACCGTGGTTGCAACTGAAGACAAATAATGCAGGGATGCT
GGGAAAGGTACCGCGATGGGTACGCAAGGGGATGGAGTGGGTGGTCGCTC
CTGTGGGGGCCCCGGGAACGAGGGACAGGGCGAGGGTGTGGGAATGGATG
AGGTACGCCTTTTTTGCATGGTTGGTGCTGAAGCTGTGGCTGCGGGTGCT
TGCGTGAATGCACGAGGACCATCCACACTCATCGCTGCCGTCATCGTTTA
GTGGAGAATCACAAGCGTCAGCCTCCGGGCCTCCGGTGACAGACCTTGAG
GACTTCGGCTCCGTGGAGGTCACGAACCGATGCTGCGGAGCCATGACTTG
CCGCGTCTTGGCCCCAGATATCTTCCTGGAAGCCAAGCAAGGCAGCGGTC
CGTCAGATACCTCAACGGCTGATAGCATCGTGCCTACTAAAAACTTTACG
TACGTTGGACGGAAGATCAAGAATGAGGACGAGCTGCGCCAGGTTCGACG
GGCCGTCAAAGCTTGTCCTTTTCATGCTCTGCGCTTGCGACGTGGCTCAA
AAGGCACGACAGTGATGCAAGGGGACGTGAATGATGCATACCCCTTGCCA
ATAGGTCCGCACGGTGAGGTGTTTTTGCTTGGATACTACACTCCTAAGAA
TGCGGGAGCTTCTTGTTACTTGATTGTCCGCCCGAAGGGCGGTAATGTCT
TGATCGATGCCCCATTGCCGGATGCAAGCCTCCTGGAGCGAATCAGAAAC
TTGGGGGAGGTAAGCTATCTGGTATTTACTCACAAGGACCACACGGCGTT
TCATCGTGAGTGGTTTCAGGCCTTGCCGGGCGTGCAGCGGGTCATACATG
TGGACGATGTGGTGCAGGAGAGGAAGCACTTTTTTTTCCCATACACTGGC
GAATTGGAGATGAAAATTGCGGGTAGCAAAAGTTTTTCACTCGATAATGA
AGGTGACGTTTTGCTAATCCCCATTCCAGGGCACACACCCGGTAGCCTCG
CGATTCTCTATCGCAACCACTACCTCTTTACGGGGGACTCCCTCCACTAC
TCCCGCCCACGTGGACACCTCGTCTCCTCACGCTTGCACTGCTGGTCCGA
TTGGGAACAACAACAAAAGAGCCTGAAGGCCCTCGAGGAATATGATTGGC
TACACATTCTGCCGGGGCATGGGGACCCGAAAGAATTTGAAAATTTGAAA
GAGGGGAAAATGTCGTTACGGCAAGGGTTGGGTTGGATGGAGGAGCAGCC
AAGAGGGTACACAAGCATGGGCCGTTTCATACCGTGGTTGCAACTGAAGA
CAAATAATGCAGGGATGCTGGGAAAGGTACCGCGATGGGTACGCAAGGGG
ATGGAGTGGGTGGTCGCTCCTGTGGGGGCCCCGGGAACGAGGGACAGGGC
GAGGGTGTGGGAATGGATGAGGTACGCCTTTTTTGCATGGTTGGTGCTGA
AGCTGTGGCTGCGGGTGCTTGCGTGAATGCACGAGGACCATCCACACTCA
TCGCTGCCGTCATCGTTTAGTGGAGAATCACAAGCGTCAGCCTCCGGGCC
TCCGGTGACAGACCTTGAGGACTTCGGCTCCGTGGAGGTCACGAACCGAT
GCTGCGGAGCCATGACTTGCCGCGTCTTGGCCCCAGATATCTTCCTGGAA
GCCAAGCAAGGCAGCGGTCCGTCAGATACCTCAACGGCTGATAGCATCGT
GCCTACTAAAAACTTTACGTACGTTGGACGGAAGATCAAGAATGAGGACG
AGCTGCGCCAGGTTCGACGGGCCGTCAAAGCTTGTCCTTTTCATGCTCTG
CGCTTGCGACGTGGCTCAAAAGGCACGACAGTGATGCAAGGGGACGTGAA
TGATGCATACCCCTTGCCAATAGGTCCGCACGGTGAGGTGTTTTTGCTTG
GATACTACACTCCTAAGAATGCGGGAGCTTCTTGTTACTTGATTGTCCGC
CCGAAGGGCGGTAATGTCTTGATCGATGCCCCATTGCCGGATGCAAGCCT
CCTGGAGCGAATCAGAAACTTGGGGGAGGTAAGCTATCTGGTATTTACTC
ACAAGGACCACACGGCGTTTCATCGTGAGTGGTTTCAGGCCTTGCCGGGC
GTGCAGCGGGTCATACATGTGGACGATGTGGTGCAGGAGAGGAAGCACTT
TTTTTTCCCATACACTGGCGAATTGGAGATGAAAATTG back to top
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