jgi.p|Nanoce1779_2|632786, mRNA_8359 (mRNA) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|632786
Unique NamemRNA_8359
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length679
Alignment locationscaffold_24:29338..30127 -

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Properties
Property NameValue
TranscriptId632872
TrackFilteredModels2
ProteinId632786
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_24supercontigscaffold_24:29338..30127 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632786gene_8359Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632786mRNA_8359-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS_8359CDS_8359Nannochloropsis oceanica (N. oceanica CCMP1779)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>mRNA_8359 ID=mRNA_8359|Name=jgi.p|Nanoce1779_2|632786|organism=Nannochloropsis oceanica|type=mRNA|length=679bp
ATGGAGGTGGAGGTCAACTTCCCCTACCAATATGGCCTTGATACCACTCT
ACATGATGCCCTTCAGCAAGGGTTGGGGCTCCCGCGTGTCATGGAGCTGG
TAGAAGATGAAGAGAAAGATGTCAATGGACGAGACTACAGTGGCAAGACT
CCTGTGATGTTTGCTGCTGCTGGTCGTGGTTCCCTCCCGGTCCTCAGCTA
TCTCCTAAAGCGAGGCGCGGAAATCAATGCCCAGGACAAGGAGGAGTTGA
CTGCCTTGTATTACGCATGTCGAAATGGCCAAGCGGCGCAGGCTACATTG
CTGCTGAAATCAGGAGCTGATCCCTTGTTGGTAGGCAAGGATGGGACGAC
CTGTTTGATCGCAGCGACTCGGTATGGGAATCCCTCGGAAACGATCAAGG
TGAGGGAGGGAGCGAGGGAGTGAGGGAGTAAGGGGGCACAGTGGGACAAG
AGGCGAGGCAAAGAGAAACGACAAATAGAAATGTCGGACGCCAGGAGGAA
AAATAACCCAACAAATAATAGAAAATGGAACGCAGTCACTGATACCCTTG
TCTCCTTCAAATATTTCCTCATCTGGGCCTATTTATCTCACACCACACAG
GCCCTGCTGGCCTTTCGCCCGTCCCTCCCTCCCTCCCTCTTTTTGAATGC
CACTGATCGTCAGGGATGGTCCGTTCTCC
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protein sequence of jgi.p|Nanoce1779_2|632786

>mRNA_8359-protein ID=mRNA_8359-protein|Name=jgi.p|Nanoce1779_2|632786|organism=Nannochloropsis oceanica|type=polypeptide|length=141bp
MEVEVNFPYQYGLDTTLHDALQQGLGLPRVMELVEDEEKDVNGRDYSGKT
PVMFAAAGRGSLPVLSYLLKRGAEINAQDKEELTALYYACRNGQAAQATL
LLKSGADPLLVGKDGTTCLIAATRYGNPSETIKVREGARE*
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mRNA from alignment at scaffold_24:29338..30127-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8359 ID=mRNA_8359|Name=jgi.p|Nanoce1779_2|632786|organism=Nannochloropsis oceanica|type=mRNA|length=790bp|location=Sequence derived from alignment at scaffold_24:29338..30127- (Nannochloropsis oceanica)
ATGGAGGTGGAGGTCAACTTCCCCTACCAATATGGCCTTGATACCACTCT
ACATGATGCCCTTCAGCAAGGGTTGGGGCTCCCGCGTGTCATGGAGCTGG
TAGAAGATGAAGAGAAAGATGTCAATGGACGAGACTACAGTGGCAAGACT
CCTGTGATGTTTGCTGCTGCTGGTCGTGGTTCCCTCCCGGTCCTCAGCTA
TCTCCTAAAGCGAGGCGCGGAAATCAATGCCCAGGACAAGGAGGAGTTGA
CTGCCTTGTATTACGCATGTCGAAATGGCCAAGCGGCGCAGGTGAGGCAA
CGGACGAGAAAGGGAAAGATGAAAAGAGGTGGTGACTGATTGTGGGAATC
GCACCATTCGAACTGACCATGCTATACGCTTCCCCCTCTTTCCCCTCTTT
AGGCTACATTGCTGCTGAAATCAGGAGCTGATCCCTTGTTGGTAGGCAAG
GATGGGACGACCTGTTTGATCGCAGCGACTCGGTATGGGAATCCCTCGGA
AACGATCAAGGTGAGGGAGGGAGCGAGGGAGTGAGGGAGTAAGGGGGCAC
AGTGGGACAAGAGGCGAGGCAAAGAGAAACGACAAATAGAAATGTCGGAC
GCCAGGAGGAAAAATAACCCAACAAATAATAGAAAATGGAACGCAGTCAC
TGATACCCTTGTCTCCTTCAAATATTTCCTCATCTGGGCCTATTTATCTC
ACACCACACAGGCCCTGCTGGCCTTTCGCCCGTCCCTCCCTCCCTCCCTC
TTTTTGAATGCCACTGATCGTCAGGGATGGTCCGTTCTCC
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Coding sequence (CDS) from alignment at scaffold_24:29338..30127-

>mRNA_8359 ID=mRNA_8359|Name=jgi.p|Nanoce1779_2|632786|organism=Nannochloropsis oceanica|type=CDS|length=846bp|location=Sequence derived from alignment at scaffold_24:29338..30127- (Nannochloropsis oceanica)
GCTACATTGCTGCTGAAATCAGGAGCTGATCCCTTGTTGGTAGGCAAGGA
TGGGACGACCTGTTTGATCGCAGCGACTCGGTATGGGAATCCCTCGGAAA
CGATCAAGGTGAGGGAGGGAGCGAGGGAGTGAATGGAGGTGGAGGTCAAC
TTCCCCTACCAATATGGCCTTGATACCACTCTACATGATGCCCTTCAGCA
AGGGTTGGGGCTCCCGCGTGTCATGGAGCTGGTAGAAGATGAAGAGAAAG
ATGTCAATGGACGAGACTACAGTGGCAAGACTCCTGTGATGTTTGCTGCT
GCTGGTCGTGGTTCCCTCCCGGTCCTCAGCTATCTCCTAAAGCGAGGCGC
GGAAATCAATGCCCAGGACAAGGAGGAGTTGACTGCCTTGTATTACGCAT
GTCGAAATGGCCAAGCGGCGCAGGCTACATTGCTGCTGAAATCAGGAGCT
GATCCCTTGTTGGTAGGCAAGGATGGGACGACCTGTTTGATCGCAGCGAC
TCGGTATGGGAATCCCTCGGAAACGATCAAGGTGAGGGAGGGAGCGAGGG
AGTGAATGGAGGTGGAGGTCAACTTCCCCTACCAATATGGCCTTGATACC
ACTCTACATGATGCCCTTCAGCAAGGGTTGGGGCTCCCGCGTGTCATGGA
GCTGGTAGAAGATGAAGAGAAAGATGTCAATGGACGAGACTACAGTGGCA
AGACTCCTGTGATGTTTGCTGCTGCTGGTCGTGGTTCCCTCCCGGTCCTC
AGCTATCTCCTAAAGCGAGGCGCGGAAATCAATGCCCAGGACAAGGAGGA
GTTGACTGCCTTGTATTACGCATGTCGAAATGGCCAAGCGGCGCAG
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Synonyms
Publications