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Properties
| Property Name | Value |
|---|
| TranscriptId | 601709 |
| Track | FilteredModels2 |
| ProteinId | 601623 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_23 | supercontig | scaffold_23:383095..384213 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8329 ID=mRNA_8329|Name=jgi.p|Nanoce1779_2|601623|organism=Nannochloropsis oceanica|type=mRNA|length=1027bp
ACAGCAGTATCACGATGCCCGGCCACCCAAGAAGACAATGCCTAGGCCTC
TCCATGCTTGTCCTCCCTCTCGTCCTTTTCCCCCTCTTGGCCGTGGCCAT
CTCCTTTCCGGGGCATGAATACTTCTCCTCTGCGGGCTCCAGCTTGGGTC
TCATTGACGACGAACCCCCTGCTGCTGGGACTAGGCAGGACCATAGTGTT
GTGTCGACTGGCACGACCATGGTGGCAGCTAAGTACAGGGACGGTGTCAT
TGTCGGCGCGGACTCGCGCTCCGTCAAGAATGGTCGTTACGTGCTCGACC
GGTTTACAGACAAGGTGCTACAAGTGAGCGAACACGTAGTCCTAGCCTGC
TCAGGCCGGACGGCCATCGTGCAGCGTCTCAGCCAGGAACTCGTGGCCCG
ACTCCGCTTCTTCCAAATCCAGCATCAACGCCTCCCCACCAGCCAGCACG
CCGCGGCCTTGCTCCGTATCCTCCTGCGGGTGGGCGTGGGACCGCTGGAG
GAAAAGGAACAACGGAGTAATGACAACACCCAGATTGGTATGGACACGGA
CGCCTTGGCCGCGGGTTGGAGTCCGGCGGAAGGCCCGCGCATCCACCAGG
TCCTCGCGGGGGGCACGGTACTGGAGGCGAGAGATTACGCCGTGGCTGGG
AGCGGGGCGACGTACATTGTGGGCTTCATGGACATGCACTATCCCCAGGC
GGAGGAGGCAGGCAAGCCTTTGGCGCACACGAGCGTGTCGCGGGAGGAGT
GCGAGGAGATGGTGAAACGGGCCTTGGCCTTGGCAGGTGGGAGGGACACC
CATTCGGGCGGGAATGTCACGATTGCCGTGGTGGATGCTCAAGGGGTGAA
GAAGCAGGCGCTTTCCCCAGGGGAGCTCCAGAAGAGCTTGAAGCAGGCCA
TGAGCGCTATGCAGGCGACGGCGAAGAAGAGGAAGGGAGAGGAGGAAACG
TTACCGTGAGAGAAAGTGAAGGTTGAAGTAAGGAAGTGAGTAGTCATGTG
TATAAATCAACGGACAAAATTGTTTAC back to topprotein sequence of jgi.p|Nanoce1779_2|601623 >mRNA_8329-protein ID=mRNA_8329-protein|Name=jgi.p|Nanoce1779_2|601623|organism=Nannochloropsis oceanica|type=polypeptide|length=315bp
MPGHPRRQCLGLSMLVLPLVLFPLLAVAISFPGHEYFSSAGSSLGLIDDE
PPAAGTRQDHSVVSTGTTMVAAKYRDGVIVGADSRSVKNGRYVLDRFTDK
VLQVSEHVVLACSGRTAIVQRLSQELVARLRFFQIQHQRLPTSQHAAALL
RILLRVGVGPLEEKEQRSNDNTQIGMDTDALAAGWSPAEGPRIHQVLAGG
TVLEARDYAVAGSGATYIVGFMDMHYPQAEEAGKPLAHTSVSREECEEMV
KRALALAGGRDTHSGGNVTIAVVDAQGVKKQALSPGELQKSLKQAMSAMQ
ATAKKRKGEEETLP* back to topmRNA from alignment at scaffold_23:383095..384213- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8329 ID=mRNA_8329|Name=jgi.p|Nanoce1779_2|601623|organism=Nannochloropsis oceanica|type=mRNA|length=1119bp|location=Sequence derived from alignment at scaffold_23:383095..384213- (Nannochloropsis oceanica)
ACAGCAGTATCACGATGCCCGGCCACCCAAGAAGACAATGCCTAGGCCTC
TCCATGCTTGTCCTCCCTCTCGTCCTTTTCCCCCTCTTGGCCGTGGCCAT
CTCCTTTCCGGGGCATGAATACTTCTCCTCTGCGGGCTCCAGCTTGGGTC
TCATTGACGACGAACCCCCTGCTGCTGGGACTAGGCAGGACCATAGTGTT
GTGTCGACTGGCACGACCATGGTGGCAGCTAAGTACAGGGACGGTGTCAT
TGTCGGCGCGGACTCGCGCTCCGTCAAGAGTAAGTCTTTATGGAATGAAC
TCCCTTCCTCCCCCGTCACCCTCCTCTTCACCGCTTTCCCCCCTACCCCC
TACCCCCCTCTCTTCTCCCAGATGGTCGTTACGTGCTCGACCGGTTTACA
GACAAGGTGCTACAAGTGAGCGAACACGTAGTCCTAGCCTGCTCAGGCCG
GACGGCCATCGTGCAGCGTCTCAGCCAGGAACTCGTGGCCCGACTCCGCT
TCTTCCAAATCCAGCATCAACGCCTCCCCACCAGCCAGCACGCCGCGGCC
TTGCTCCGTATCCTCCTGCGGGTGGGCGTGGGACCGCTGGAGGAAAAGGA
ACAACGGAGTAATGACAACACCCAGATTGGTATGGACACGGACGCCTTGG
CCGCGGGTTGGAGTCCGGCGGAAGGCCCGCGCATCCACCAGGTCCTCGCG
GGGGGCACGGTACTGGAGGCGAGAGATTACGCCGTGGCTGGGAGCGGGGC
GACGTACATTGTGGGCTTCATGGACATGCACTATCCCCAGGCGGAGGAGG
CAGGCAAGCCTTTGGCGCACACGAGCGTGTCGCGGGAGGAGTGCGAGGAG
ATGGTGAAACGGGCCTTGGCCTTGGCAGGTGGGAGGGACACCCATTCGGG
CGGGAATGTCACGATTGCCGTGGTGGATGCTCAAGGGGTGAAGAAGCAGG
CGCTTTCCCCAGGGGAGCTCCAGAAGAGCTTGAAGCAGGCCATGAGCGCT
ATGCAGGCGACGGCGAAGAAGAGGAAGGGAGAGGAGGAAACGTTACCGTG
AGAGAAAGTGAAGGTTGAAGTAAGGAAGTGAGTAGTCATGTGTATAAATC
AACGGACAAAATTGTTTAC back to topCoding sequence (CDS) from alignment at scaffold_23:383095..384213- >mRNA_8329 ID=mRNA_8329|Name=jgi.p|Nanoce1779_2|601623|organism=Nannochloropsis oceanica|type=CDS|length=1890bp|location=Sequence derived from alignment at scaffold_23:383095..384213- (Nannochloropsis oceanica)
ATGGTCGTTACGTGCTCGACCGGTTTACAGACAAGGTGCTACAAGTGAGC
GAACACGTAGTCCTAGCCTGCTCAGGCCGGACGGCCATCGTGCAGCGTCT
CAGCCAGGAACTCGTGGCCCGACTCCGCTTCTTCCAAATCCAGCATCAAC
GCCTCCCCACCAGCCAGCACGCCGCGGCCTTGCTCCGTATCCTCCTGCGG
GTGGGCGTGGGACCGCTGGAGGAAAAGGAACAACGGAGTAATGACAACAC
CCAGATTGGTATGGACACGGACGCCTTGGCCGCGGGTTGGAGTCCGGCGG
AAGGCCCGCGCATCCACCAGGTCCTCGCGGGGGGCACGGTACTGGAGGCG
AGAGATTACGCCGTGGCTGGGAGCGGGGCGACGTACATTGTGGGCTTCAT
GGACATGCACTATCCCCAGGCGGAGGAGGCAGGCAAGCCTTTGGCGCACA
CGAGCGTGTCGCGGGAGGAGTGCGAGGAGATGGTGAAACGGGCCTTGGCC
TTGGCAGGTGGGAGGGACACCCATTCGGGCGGGAATGTCACGATTGCCGT
GGTGGATGCTCAAGGGGTGAAGAAGCAGGCGCTTTCCCCAGGGGAGCTCC
AGAAGAGCTTGAAGCAGGCCATGAGCGCTATGCAGGCGACGGCGAAGAAG
AGGAAGGGAGAGGAGGAAACGTTACCGTGAATGCCCGGCCACCCAAGAAG
ACAATGCCTAGGCCTCTCCATGCTTGTCCTCCCTCTCGTCCTTTTCCCCC
TCTTGGCCGTGGCCATCTCCTTTCCGGGGCATGAATACTTCTCCTCTGCG
GGCTCCAGCTTGGGTCTCATTGACGACGAACCCCCTGCTGCTGGGACTAG
GCAGGACCATAGTGTTGTGTCGACTGGCACGACCATGGTGGCAGCTAAGT
ACAGGGACGGTGTCATTGTCGGCGCGGACTCGCGCTCCGTCAAGAATGGT
CGTTACGTGCTCGACCGGTTTACAGACAAGGTGCTACAAGTGAGCGAACA
CGTAGTCCTAGCCTGCTCAGGCCGGACGGCCATCGTGCAGCGTCTCAGCC
AGGAACTCGTGGCCCGACTCCGCTTCTTCCAAATCCAGCATCAACGCCTC
CCCACCAGCCAGCACGCCGCGGCCTTGCTCCGTATCCTCCTGCGGGTGGG
CGTGGGACCGCTGGAGGAAAAGGAACAACGGAGTAATGACAACACCCAGA
TTGGTATGGACACGGACGCCTTGGCCGCGGGTTGGAGTCCGGCGGAAGGC
CCGCGCATCCACCAGGTCCTCGCGGGGGGCACGGTACTGGAGGCGAGAGA
TTACGCCGTGGCTGGGAGCGGGGCGACGTACATTGTGGGCTTCATGGACA
TGCACTATCCCCAGGCGGAGGAGGCAGGCAAGCCTTTGGCGCACACGAGC
GTGTCGCGGGAGGAGTGCGAGGAGATGGTGAAACGGGCCTTGGCCTTGGC
AGGTGGGAGGGACACCCATTCGGGCGGGAATGTCACGATTGCCGTGGTGG
ATGCTCAAGGGGTGAAGAAGCAGGCGCTTTCCCCAGGGGAGCTCCAGAAG
AGCTTGAAGCAGGCCATGAGCGCTATGCAGGCGACGGCGAAGAAGAGGAA
GGGAGAGGAGGAAACGTTACCGTGAATGCCCGGCCACCCAAGAAGACAAT
GCCTAGGCCTCTCCATGCTTGTCCTCCCTCTCGTCCTTTTCCCCCTCTTG
GCCGTGGCCATCTCCTTTCCGGGGCATGAATACTTCTCCTCTGCGGGCTC
CAGCTTGGGTCTCATTGACGACGAACCCCCTGCTGCTGGGACTAGGCAGG
ACCATAGTGTTGTGTCGACTGGCACGACCATGGTGGCAGCTAAGTACAGG
GACGGTGTCATTGTCGGCGCGGACTCGCGCTCCGTCAAGA back to top
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