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Properties
| Property Name | Value |
|---|
| TranscriptId | 601652 |
| Track | FilteredModels2 |
| ProteinId | 601566 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_23 | supercontig | scaffold_23:353578..355170 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8317 ID=mRNA_8317|Name=jgi.p|Nanoce1779_2|601566|organism=Nannochloropsis oceanica|type=mRNA|length=1593bp
GCACGTCACAAAGCAATGCTGAGACTTGATTCCCGCCATATCCCTCACCA
CATCCTTGTCCAGACCCACCAACTCCATAAATACGAAGGTGCGGGATTTC
GCCTTCAGGTGGATGCCCGTCTCCGCCTCGCACTCCTCGCTGTCGTGGTA
CTGCTTGCGCTCCAACCCCTGTACCTACGGCTGCCCCCACAGCTGCTCCT
ACCGCCTTTCCAACAGCCGCTCCCACTGGTGCCCCGACTTCCTTCCCCAC
GGCTTCCCCAACAGTGGCATCATCGGCTGCCCCGACACTTGCCCCCACCG
CCTCGCCAACGCCCGCCCCCATGGCAGCTCCGACCGACTCTCCCACCGCT
GCCCCCACAAAGTCCGTCTACACACCTCCTTCCACCGATTCCTCAACAGG
TGCTCCTACATCCACCCCGACAGCTGCCCTCACTAAGCCCGTCTACACTC
CCCCTCCCACCACCGCCCCCACGGCTGCGCCTACTTACTCTCCTACTTCT
TCACTCAGCCCCGACGGTTGCCCCTACGACTGCCCCAACTTCCATCCCTA
CGGCCGCCCCAACAGCTGCTCCTACCTCCTCGCCAACGATTTCGCCCACC
GCTTCTCCTACGGCTTTCCAGACTTTCGCAACCACGCCGTTAGATAATGT
GTACTCGTCCCCTCAAACGCAAGACGTGCCCACGGAGCCTCCGACCATGG
CACCTACCAAGTTCGTTAATAAGCCCAACCCCTACGTCAAGCTGGCCATC
AACAGCTCAAATGCTAGCTGCCAGGGCAACCGGTTGCGCAGACAAGGGTG
AAGCTGGGCGGAGCGAATGAGTGGGTTAAGTCGTTTGGGACTTGAATTAA
GAGACGCAGAGGCTGCGAAAGACACCGTCCTATCGGAATTTGTCTGAAGT
AGGGTGAGTTTAAATGAATATTTTAGCGAGGTGTGCCCGGTTGGAAAAGT
GACCAGAGTATATGAGTATGAAATGCAAGAGAGTATCAGGAACCGTAAGC
CTGCAAACGACCCTAGAAGGATTGACATCGACAAAGATAGAGACACATGT
GCAATGTATGCGTAAGGAGGTCACATAAGTGAACGCCAGAGAGAATGCCT
CTCATACTACAGGTTCTTCGCTTTCTTCAATCCGACCATATTATCCTCGC
TTTTGCTAGGCGGTTAGGATGGCTAAACACTTGTAAGCTTGTATTTGCTT
CACCCATTGGTTGAGGGCTACGTGTTTTCTCATTTTAAAAAATTTCAAAC
GAGAAGTTCTTAAGAGGAGGAAGTCATTCTTCATTCGGCAAGGAAAGCAA
ATAATGTACGCACATTATTGAGGACTTTTTAAAAATAGTAATTTGACCTT
TTAAGACGAGGATGGTGAGACAGATTCAAATATATCGGTTTTCATGATGA
AATGATTTAAGATTAGGCATATAGTATTACAGCCGGAAATGCATGCGCTG
CTCATGAGAGTGCGATGTTCTGCATGGTTAAGTGTCGGCCTGCTTTGACA
CGGGGCATTCAAATCAATCCCAATGTTAGTTGGAAATATGTCATGATTCA
AGTCGTTGAAGTTCGTGCTATTGCTGACTGATCCATATTAAAC back to topprotein sequence of jgi.p|Nanoce1779_2|601566 >mRNA_8317-protein ID=mRNA_8317-protein|Name=jgi.p|Nanoce1779_2|601566|organism=Nannochloropsis oceanica|type=polypeptide|length=262bp
MLRLDSRHIPHHILVQTHQLHKYEGAGFRLQVDARLRLALLAVVVLLALQ
PLYLRLPPQLLLPPFQQPLPLVPRLPSPRLPQQWHHRLPRHLPPPPRQRP
PPWQLRPTLPPLPPQSPSTHLLPPIPQQVLLHPPRQLPSLSPSTLPLPPP
PPRLRLLTLLLLHSAPTVAPTTAPTSIPTAAPTAAPTSSPTISPTASPTA
FQTFATTPLDNVYSSPQTQDVPTEPPTMAPTKFVNKPNPYVKLAINSSNA
SCQGNRLRRQG* back to topmRNA from alignment at scaffold_23:353578..355170- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8317 ID=mRNA_8317|Name=jgi.p|Nanoce1779_2|601566|organism=Nannochloropsis oceanica|type=mRNA|length=1593bp|location=Sequence derived from alignment at scaffold_23:353578..355170- (Nannochloropsis oceanica)
GCACGTCACAAAGCAATGCTGAGACTTGATTCCCGCCATATCCCTCACCA
CATCCTTGTCCAGACCCACCAACTCCATAAATACGAAGGTGCGGGATTTC
GCCTTCAGGTGGATGCCCGTCTCCGCCTCGCACTCCTCGCTGTCGTGGTA
CTGCTTGCGCTCCAACCCCTGTACCTACGGCTGCCCCCACAGCTGCTCCT
ACCGCCTTTCCAACAGCCGCTCCCACTGGTGCCCCGACTTCCTTCCCCAC
GGCTTCCCCAACAGTGGCATCATCGGCTGCCCCGACACTTGCCCCCACCG
CCTCGCCAACGCCCGCCCCCATGGCAGCTCCGACCGACTCTCCCACCGCT
GCCCCCACAAAGTCCGTCTACACACCTCCTTCCACCGATTCCTCAACAGG
TGCTCCTACATCCACCCCGACAGCTGCCCTCACTAAGCCCGTCTACACTC
CCCCTCCCACCACCGCCCCCACGGCTGCGCCTACTTACTCTCCTACTTCT
TCACTCAGCCCCGACGGTTGCCCCTACGACTGCCCCAACTTCCATCCCTA
CGGCCGCCCCAACAGCTGCTCCTACCTCCTCGCCAACGATTTCGCCCACC
GCTTCTCCTACGGCTTTCCAGACTTTCGCAACCACGCCGTTAGATAATGT
GTACTCGTCCCCTCAAACGCAAGACGTGCCCACGGAGCCTCCGACCATGG
CACCTACCAAGTTCGTTAATAAGCCCAACCCCTACGTCAAGCTGGCCATC
AACAGCTCAAATGCTAGCTGCCAGGGCAACCGGTTGCGCAGACAAGGGTG
AAGCTGGGCGGAGCGAATGAGTGGGTTAAGTCGTTTGGGACTTGAATTAA
GAGACGCAGAGGCTGCGAAAGACACCGTCCTATCGGAATTTGTCTGAAGT
AGGGTGAGTTTAAATGAATATTTTAGCGAGGTGTGCCCGGTTGGAAAAGT
GACCAGAGTATATGAGTATGAAATGCAAGAGAGTATCAGGAACCGTAAGC
CTGCAAACGACCCTAGAAGGATTGACATCGACAAAGATAGAGACACATGT
GCAATGTATGCGTAAGGAGGTCACATAAGTGAACGCCAGAGAGAATGCCT
CTCATACTACAGGTTCTTCGCTTTCTTCAATCCGACCATATTATCCTCGC
TTTTGCTAGGCGGTTAGGATGGCTAAACACTTGTAAGCTTGTATTTGCTT
CACCCATTGGTTGAGGGCTACGTGTTTTCTCATTTTAAAAAATTTCAAAC
GAGAAGTTCTTAAGAGGAGGAAGTCATTCTTCATTCGGCAAGGAAAGCAA
ATAATGTACGCACATTATTGAGGACTTTTTAAAAATAGTAATTTGACCTT
TTAAGACGAGGATGGTGAGACAGATTCAAATATATCGGTTTTCATGATGA
AATGATTTAAGATTAGGCATATAGTATTACAGCCGGAAATGCATGCGCTG
CTCATGAGAGTGCGATGTTCTGCATGGTTAAGTGTCGGCCTGCTTTGACA
CGGGGCATTCAAATCAATCCCAATGTTAGTTGGAAATATGTCATGATTCA
AGTCGTTGAAGTTCGTGCTATTGCTGACTGATCCATATTAAAC back to topCoding sequence (CDS) from alignment at scaffold_23:353578..355170- >mRNA_8317 ID=mRNA_8317|Name=jgi.p|Nanoce1779_2|601566|organism=Nannochloropsis oceanica|type=CDS|length=786bp|location=Sequence derived from alignment at scaffold_23:353578..355170- (Nannochloropsis oceanica)
ATGCTGAGACTTGATTCCCGCCATATCCCTCACCACATCCTTGTCCAGAC
CCACCAACTCCATAAATACGAAGGTGCGGGATTTCGCCTTCAGGTGGATG
CCCGTCTCCGCCTCGCACTCCTCGCTGTCGTGGTACTGCTTGCGCTCCAA
CCCCTGTACCTACGGCTGCCCCCACAGCTGCTCCTACCGCCTTTCCAACA
GCCGCTCCCACTGGTGCCCCGACTTCCTTCCCCACGGCTTCCCCAACAGT
GGCATCATCGGCTGCCCCGACACTTGCCCCCACCGCCTCGCCAACGCCCG
CCCCCATGGCAGCTCCGACCGACTCTCCCACCGCTGCCCCCACAAAGTCC
GTCTACACACCTCCTTCCACCGATTCCTCAACAGGTGCTCCTACATCCAC
CCCGACAGCTGCCCTCACTAAGCCCGTCTACACTCCCCCTCCCACCACCG
CCCCCACGGCTGCGCCTACTTACTCTCCTACTTCTTCACTCAGCCCCGAC
GGTTGCCCCTACGACTGCCCCAACTTCCATCCCTACGGCCGCCCCAACAG
CTGCTCCTACCTCCTCGCCAACGATTTCGCCCACCGCTTCTCCTACGGCT
TTCCAGACTTTCGCAACCACGCCGTTAGATAATGTGTACTCGTCCCCTCA
AACGCAAGACGTGCCCACGGAGCCTCCGACCATGGCACCTACCAAGTTCG
TTAATAAGCCCAACCCCTACGTCAAGCTGGCCATCAACAGCTCAAATGCT
AGCTGCCAGGGCAACCGGTTGCGCAGACAAGGGTGA back to top
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