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Properties
| Property Name | Value |
|---|
| TranscriptId | 601524 |
| Track | FilteredModels2 |
| ProteinId | 601438 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_23 | supercontig | scaffold_23:268365..269431 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8284 ID=mRNA_8284|Name=jgi.p|Nanoce1779_2|601438|organism=Nannochloropsis oceanica|type=mRNA|length=749bp
ACAGCATGTCAACCTCCACCAACTCCTCTTCCCATTTCTACGTGGCTCTG
CCTGCTGATTCCACCACCAGCACTGCCAGCGCCAGTACAACAGCCGCTGC
CGCCGGCGCTGGCTTCCCATCCTCTTCCTCCCCTTCCTCACGCGTCGTGC
GGACCAAGCGCCGCTGCCTTGGCTTGAGCAGCGGCTGTCTCCTCATCCTG
CTTCTGGGGCTCTTGCTATTCTTTCTGGTACCCCGCCGGCCTATTGTGAG
GTATCAGAGCTCGACGCTGTCCTTGGATGAGGGGACGTCGAGCGCAACCT
TGACCCAGCTCTTCTCCTACTACAACCCGAATTATTATACTGTGCAATGG
AATAACCTTCACATCCAAGTCGAAGACCAAGACACCAATACCCCTCTCGG
CTACGGCTGGCACAATACGAGTTTTCCCGTTCGAGCCCTTTCTTCCCGTT
CCGCGGGTGTGAATATCACGATTACTGCTGCTTTCTCCGACTTGGCGCCT
CTCATCAAGGAGCAGTGTGCAGATCGAAACTACGTCACCCTGGCGTCCTA
CGGCACCGTGAATGCGTACCTCTGGAGCCAAAACTTCGGGAGTATTCGGA
TAGGCCCTTTCACGGAGACCATTGATTGTGGTGGTGCTGCCAAGCTGCAG
TACCGCCGTCGACCACAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGAA
GGAGCGACGATCAGCAGGGCCTGAGCAGGGGGGACAATGGTGGTTGTAA back to topprotein sequence of jgi.p|Nanoce1779_2|601438 >mRNA_8284-protein ID=mRNA_8284-protein|Name=jgi.p|Nanoce1779_2|601438|organism=Nannochloropsis oceanica|type=polypeptide|length=248bp
MSTSTNSSSHFYVALPADSTTSTASASTTAAAAGAGFPSSSSPSSRVVRT
KRRCLGLSSGCLLILLLGLLLFFLVPRRPIVRYQSSTLSLDEGTSSATLT
QLFSYYNPNYYTVQWNNLHIQVEDQDTNTPLGYGWHNTSFPVRALSSRSA
GVNITITAAFSDLAPLIKEQCADRNYVTLASYGTVNAYLWSQNFGSIRIG
PFTETIDCGGAAKLQYRRRPQQQQQQQQQQQKERRSAGPEQGGQWWL* back to topmRNA from alignment at scaffold_23:268365..269431+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8284 ID=mRNA_8284|Name=jgi.p|Nanoce1779_2|601438|organism=Nannochloropsis oceanica|type=mRNA|length=1067bp|location=Sequence derived from alignment at scaffold_23:268365..269431+ (Nannochloropsis oceanica)
ACAGCATGTCAACCTCCACCAACTCCTCTTCCCATTTCTACGTGGCTCTG
CCTGCTGATTCCACCACCAGCACTGCCAGCGCCAGTACAACAGCCGCTGC
CGCCGGCGCTGGCTTCCCATCCTCTTCCTCCCCTTCCTCACGCGTCGTGC
GGACCAAGCGCCGCTGCCTTGGCTTGAGCAGCGGCTGTCTCCTCATCCTG
CTTCTGGGGCTCTTGCTATTCTTTCTGGTACCCCGCCGGCCTATTGTGAG
GTATCAGAGCTCGACGCTGTCCTTGGATGAGGGGACGTCGAGCGCAACCT
TGACCCAGCTCTTCTCCTACTACAACCCGAATTATTATACTGTGTACGTA
GATGGCGTGTCTGTACCTTTTGCACGCGCAGCCCTCTATGTCTCTCCTTT
TTGTCTTGAAGTGGGTACCCTCTGGGAATTGTGGGAGGGATGTGACCCGG
GACGACTGAATGTTTCTTATCACATCCATCCCTCCTTCCCTCTCTTCTTC
TCAGGCAATGGAATAACCTTCACATCCAAGTCGAAGACCAAGACACCAAT
ACCCCTCTCGGCTACGGCTGGCACAATACGAGTTTTCCCGTTCGAGCCCT
TTCTTCCCGTTCCGCGGGTGTGAATATCACGATTACTGCTGCTTTCTCCG
ACTTGGCGCCTCTCATCAAGGAGCAGTGTGCAGATCGAAACTACGTCACC
CTGGCGTCCTACGGTAAGTCCTCCCTCGTTGTCACCGTCCCTCCCTCTTT
CCCCCTCTTCCTCTACCCCACAGTCATGTTTTCCTTCTCTCCGAGACGCA
TTCGTTGATCAACATACCGACCTATTCATTCTTTTTTCCCCAATCAAACA
TCCATCTAATTCGATTACAGGCACCGTGAATGCGTACCTCTGGAGCCAAA
ACTTCGGGAGTATTCGGATAGGCCCTTTCACGGAGACCATTGATTGTGGT
GGTGCTGCCAAGCTGCAGTACCGCCGTCGACCACAGCAACAGCAGCAGCA
GCAGCAGCAGCAGCAGAAGGAGCGACGATCAGCAGGGCCTGAGCAGGGGG
GACAATGGTGGTTGTAA back to topCoding sequence (CDS) from alignment at scaffold_23:268365..269431+ >mRNA_8284 ID=mRNA_8284|Name=jgi.p|Nanoce1779_2|601438|organism=Nannochloropsis oceanica|type=CDS|length=2232bp|location=Sequence derived from alignment at scaffold_23:268365..269431+ (Nannochloropsis oceanica)
ATGTCAACCTCCACCAACTCCTCTTCCCATTTCTACGTGGCTCTGCCTGC
TGATTCCACCACCAGCACTGCCAGCGCCAGTACAACAGCCGCTGCCGCCG
GCGCTGGCTTCCCATCCTCTTCCTCCCCTTCCTCACGCGTCGTGCGGACC
AAGCGCCGCTGCCTTGGCTTGAGCAGCGGCTGTCTCCTCATCCTGCTTCT
GGGGCTCTTGCTATTCTTTCTGGTACCCCGCCGGCCTATTGTGAGGTATC
AGAGCTCGACGCTGTCCTTGGATGAGGGGACGTCGAGCGCAACCTTGACC
CAGCTCTTCTCCTACTACAACCCGAATTATTATACTGTGCAATGGAATAA
CCTTCACATCCAAGTCGAAGACCAAGACACCAATACCCCTCTCGGCTACG
GCTGGCACAATACGAGTTTTCCCGTTCGAGCCCTTTCTTCCCGTTCCGCG
GGTGTGAATATCACGATTACTGCTGCTTTCTCCGACTTGGCGCCTCTCAT
CAAGGAGCAGTGTGCAGATCGAAACTACGTCACCCTGGCGTCCTACGGCA
CCGTGAATGCGTACCTCTGGAGCCAAAACTTCGGGAGTATTCGGATAGGC
CCTTTCACGGAGACCATTGATTGTGGTGGTGCTGCCAAGCTGCAGTACCG
CCGTCGACCACAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGAAGGAGC
GACGATCAGCAGGGCCTGAGCAGGGGGGACAATGGTGGTTGTAAATGTCA
ACCTCCACCAACTCCTCTTCCCATTTCTACGTGGCTCTGCCTGCTGATTC
CACCACCAGCACTGCCAGCGCCAGTACAACAGCCGCTGCCGCCGGCGCTG
GCTTCCCATCCTCTTCCTCCCCTTCCTCACGCGTCGTGCGGACCAAGCGC
CGCTGCCTTGGCTTGAGCAGCGGCTGTCTCCTCATCCTGCTTCTGGGGCT
CTTGCTATTCTTTCTGGTACCCCGCCGGCCTATTGTGAGGTATCAGAGCT
CGACGCTGTCCTTGGATGAGGGGACGTCGAGCGCAACCTTGACCCAGCTC
TTCTCCTACTACAACCCGAATTATTATACTGTGCAATGGAATAACCTTCA
CATCCAAGTCGAAGACCAAGACACCAATACCCCTCTCGGCTACGGCTGGC
ACAATACGAGTTTTCCCGTTCGAGCCCTTTCTTCCCGTTCCGCGGGTGTG
AATATCACGATTACTGCTGCTTTCTCCGACTTGGCGCCTCTCATCAAGGA
GCAGTGTGCAGATCGAAACTACGTCACCCTGGCGTCCTACGGCACCGTGA
ATGCGTACCTCTGGAGCCAAAACTTCGGGAGTATTCGGATAGGCCCTTTC
ACGGAGACCATTGATTGTGGTGGTGCTGCCAAGCTGCAGTACCGCCGTCG
ACCACAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGAAGGAGCGACGAT
CAGCAGGGCCTGAGCAGGGGGGACAATGGTGGTTGTAAATGTCAACCTCC
ACCAACTCCTCTTCCCATTTCTACGTGGCTCTGCCTGCTGATTCCACCAC
CAGCACTGCCAGCGCCAGTACAACAGCCGCTGCCGCCGGCGCTGGCTTCC
CATCCTCTTCCTCCCCTTCCTCACGCGTCGTGCGGACCAAGCGCCGCTGC
CTTGGCTTGAGCAGCGGCTGTCTCCTCATCCTGCTTCTGGGGCTCTTGCT
ATTCTTTCTGGTACCCCGCCGGCCTATTGTGAGGTATCAGAGCTCGACGC
TGTCCTTGGATGAGGGGACGTCGAGCGCAACCTTGACCCAGCTCTTCTCC
TACTACAACCCGAATTATTATACTGTGCAATGGAATAACCTTCACATCCA
AGTCGAAGACCAAGACACCAATACCCCTCTCGGCTACGGCTGGCACAATA
CGAGTTTTCCCGTTCGAGCCCTTTCTTCCCGTTCCGCGGGTGTGAATATC
ACGATTACTGCTGCTTTCTCCGACTTGGCGCCTCTCATCAAGGAGCAGTG
TGCAGATCGAAACTACGTCACCCTGGCGTCCTACGGCACCGTGAATGCGT
ACCTCTGGAGCCAAAACTTCGGGAGTATTCGGATAGGCCCTTTCACGGAG
ACCATTGATTGTGGTGGTGCTGCCAAGCTGCAGTACCGCCGTCGACCACA
GCAACAGCAGCAGCAGCAGCAGCAGCAGCAGAAGGAGCGACGATCAGCAG
GGCCTGAGCAGGGGGGACAATGGTGGTTGTAA back to top
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