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Properties
| Property Name | Value |
|---|
| TranscriptId | 559424 |
| Track | FilteredModels2 |
| ProteinId | 559338 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_23 | supercontig | scaffold_23:266122..268189 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8283 ID=mRNA_8283|Name=jgi.p|Nanoce1779_2|559338|organism=Nannochloropsis oceanica|type=mRNA|length=1659bp
AGGATGTGGTGGTCACATGCGGGCACGCGAGAACGTCATCATCATTCCGG
ATAAATGATGTTCCGGAGTCCAAGTGGCATATATGCATTTCTGCCGCACA
TACGATCACATAATATAACATAAGTATACTCTACGACCCATACATCGCGC
ACAACACACACGAACAGCTTTTCCACAGTACCTCAGACTCGTCGTCCTCC
TCTGCCAGGGATGTCCGCTTGCCTGAGCGCTTGCGCCGACATATCTCTGC
CTCCTTCCTGACCTCTTTCACACCTTGGTCTCGCTTTCCTTGCCGAAGCC
CCGTACCCTAGCCTCCCCTGCATCTCAAATTATGCATGTGATAAGCCGCG
GCCGGATTCCTTAACGCCATCGCCAACATGAGTCGCAACGCGTGCGATAA
AAGCCATTGCGCTTCACTTACTCGTCCCTCTCTTCTTCCCCGTCCACCTC
TCCCTCCCGCCCCGTCACAGACAGAAGAGCCATGCCCAAAGCCGCGGCCG
GCACGCCCAAGGCCATTGCCAACAAAGCCAAAAGCAAGGGCCTGCAACGT
CTGCGATGGTACTGCCAAATGTGCGAGAAGCAATGCCGGGATGAGAATGG
GTTCAAGTGCCACACCATGTCCGAGAGCCATTTGCGACAGATGCGGGTGT
ACGCGGAGAATCCCACGCAGGTGATGGAAAAATTTTCTTCAGAGTTCGAG
GAGAATTATCTCGAGACCCTCTCTCGGCTACATGGCACCAAGCGCGTCCC
GGCTAACCAGGTCTATCAAGAACTGATCTGCAACAAGACACACATCCACA
TGAACGCGACCAAGTGGGACGCCCTCACCACTTTCATCAAGTACCTAGGG
AAGAAGGGCCTGTGCCTGGTAGATGAAACGGAAAAGGGTTGGTTCGTCCA
ATGGATTGATCGGGAATACTTGAAACGAAGGGAAGAAATCGAGAAGGCCA
GGAAGGAGGAGGTAGAGGAAGAGGAGGAGGGGTGGAGGATGTCCATGAAG
AAGAAGATGGTTGTGGGTGGTAATGGAGTAGGAGAGGGGGGAGGAGGGAA
GAAAAGTGAACTGGAGAAACTGATGGAACAGGACACGGCGCGCAAGGCGG
CAGAGGCGGCGGCTAGGAAGAAAAGGGAAGAAGTGGAGGAGGAAATGGGG
GATGGCGGGATGGAGGAGGGGCGGACAGAGAACTGGTTGATGGAGGGAAT
AGTTGTAAAGATTGTGAATAAAAAGATAGGAGGTGGAAAGTACTACAAGC
AGAAGGGTCGGGTTGAGAAGCTACTGGAGGGAGGGTTTGTAGGCGAGATA
TGCCTGACGGGGGAGGAAGGAGGGAGGGAGGGAGGAAGAGGAGGAGGAGG
GGTGAGATTGCGGATCGATCAGGAGGAGTTGGAGACGGTGATTCCGGCAG
TGGGTGGAAGAGTGTTGATTTTGAATGGCAAGGGGAAGGGGAGGGAAGGA
GAAATGGTGGGGTTGGACGTGGAGAACTATGCATGTGCGGTGCGGGTGCG
AGGAGAGAGGGAGATGGTCTTGAAGGGAGTGCAGTATGAGGATGTGTGTA
AGGTGGATCGGGATTGGCTTCGAGGGGGAGGAGGACGTTGATATGCCCGA
AAAGGAAGGAGACGAACAGGAATAACGGAATAAAAGACCAAAAATGACAT
AACGACACG back to topprotein sequence of jgi.p|Nanoce1779_2|559338 >mRNA_8283-protein ID=mRNA_8283-protein|Name=jgi.p|Nanoce1779_2|559338|organism=Nannochloropsis oceanica|type=polypeptide|length=370bp
MPKAAAGTPKAIANKAKSKGLQRLRWYCQMCEKQCRDENGFKCHTMSESH
LRQMRVYAENPTQVMEKFSSEFEENYLETLSRLHGTKRVPANQVYQELIC
NKTHIHMNATKWDALTTFIKYLGKKGLCLVDETEKGWFVQWIDREYLKRR
EEIEKARKEEVEEEEEGWRMSMKKKMVVGGNGVGEGGGGKKSELEKLMEQ
DTARKAAEAAARKKREEVEEEMGDGGMEEGRTENWLMEGIVVKIVNKKIG
GGKYYKQKGRVEKLLEGGFVGEICLTGEEGGREGGRGGGGVRLRIDQEEL
ETVIPAVGGRVLILNGKGKGREGEMVGLDVENYACAVRVRGEREMVLKGV
QYEDVCKVDRDWLRGGGGR* back to topmRNA from alignment at scaffold_23:266122..268189- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8283 ID=mRNA_8283|Name=jgi.p|Nanoce1779_2|559338|organism=Nannochloropsis oceanica|type=mRNA|length=2068bp|location=Sequence derived from alignment at scaffold_23:266122..268189- (Nannochloropsis oceanica)
AGGATGTGGTGGTCACATGCGGGCACGCGAGAACGTCATCATCATTCCGG
ATAAATGATGTTCCGGAGTCCAAGTGGCATATATGCATTTCTGCCGCACA
TACGATCACATAATATAACATAAGTATACTCTACGACCCATACATCGCGC
ACAACACACACGAACAGCTTTTCCACAGTACCTCAGACTCGTCGTCCTCC
TCTGCCAGGGATGTCCGCTTGCCTGAGCGCTTGCGCCGACATATCTCTGC
CTCCTTCCTGACCTCTTTCACACCTTGGTCTCGCTTTCCTTGCCGAAGCC
CCGTACCCTAGCCTCCCCTGCATCTCAAATTATGCATGTGATAAGCCGCG
GCCGGATTCCTTAACGCCATCGCCAACATGAGTCGCAACGCGTGCGATAA
AAGCCATTGCGCTTCACTTACTCGTCCCTCTCTTCTTCCCCGTCCACCTC
TCCCTCCCGCCCCGTCACAGACAGAAGAGCCATGCCCAAAGCCGCGGCCG
GCACGCCCAAGGCCATTGCCAACAAAGCCAAAAGCAAGGGCCTGCAACGT
CTGCGATGGTACTGCCAAATGTGCGAGAAGCAATGCCGGGATGAGAATGG
GTTCAAGTGCCACACCATGTCCGAGAGCCATTTGCGACAGATGCGGGTGT
ACGCGGAGAATCCCACGCAGGTACGTTGCCACCTTCCCTCCCTTCCGTTC
TCTCTCCCTCCCTCCTTTCTTCGCTCTATCCTTGCTTGTGTGCGTGCATG
CGTGAAGGGCACCATCTCCCCCGTCCACGCGACACTCAACATCTCCCCTC
GCTTCCACCCTCCCTCCCTCCCTCCCCTAGGTGATGGAAAAATTTTCTTC
AGAGTTCGAGGAGAATTATCTCGAGACCCTCTCTCGGCTACATGGCACCA
AGCGCGTCCCGGCTAACCAGGTCTATCAAGAACTGATCTGCAACAAGACA
CACATCCACATGAACGCGACCAAGTGGGACGCCCTCACCACTTTCATCAA
GTACCTAGGGAAGAAGGGCCTGTGCCTGGTAGATGAAACGGAAAAGGGTT
GGTTCGTCCAATGGATTGATCGGGAATACTTGAAACGAAGGGAAGAAATC
GAGAAGGCCAGGAAGGAGGAGGTAGAGGAAGAGGTGCGATTGCAAAGGCT
CATGGCGGCCAGGGCAGCAGCGGCGGCAGCAGCTACGGGGGGGGAAAGGA
AGGCAGAGGAAGAGGAGGAAGGGAAAAGGGAGTTGAGGAGGGGGGAGGAG
GAAGGGAGGATCGTGATTGGCGCGGGAAGGTTAGGTGGAGGAGGAGAAGG
AGGAGGACGAGGAGGTGGGGGTATTAAGAGACCAAGGCCAGTGGCGGCGA
CGGGCAATGTGTTTGGGGGTCAGGAGGAGGAGGAGGAGGGGTGGAGGATG
TCCATGAAGAAGAAGATGGTTGTGGGTGGTAATGGAGTAGGAGAGGGGGG
AGGAGGGAAGAAAAGTGAACTGGAGAAACTGATGGAACAGGACACGGCGC
GCAAGGCGGCAGAGGCGGCGGCTAGGAAGAAAAGGGAAGAAGTGGAGGAG
GAAATGGGGGATGGCGGGATGGAGGAGGGGCGGACAGAGAACTGGTTGAT
GGAGGGAATAGTTGTAAAGATTGTGAATAAAAAGATAGGAGGTGGAAAGT
ACTACAAGCAGAAGGGTCGGGTTGAGAAGCTACTGGAGGGAGGGTTTGTA
GGCGAGATATGCCTGACGGGGGAGGAAGGAGGGAGGGAGGGAGGAAGAGG
AGGAGGAGGGGTGAGATTGCGGATCGATCAGGAGGAGTTGGAGACGGTGA
TTCCGGCAGTGGGTGGAAGAGTGTTGATTTTGAATGGCAAGGGGAAGGGG
AGGGAAGGAGAAATGGTGGGGTTGGACGTGGAGAACTATGCATGTGCGGT
GCGGGTGCGAGGAGAGAGGGAGATGGTCTTGAAGGGAGTGCAGTATGAGG
ATGTGTGTAAGGTGGATCGGGATTGGCTTCGAGGGGGAGGAGGACGTTGA
TATGCCCGAAAAGGAAGGAGACGAACAGGAATAACGGAATAAAAGACCAA
AAATGACATAACGACACG back to topCoding sequence (CDS) from alignment at scaffold_23:266122..268189- >mRNA_8283 ID=mRNA_8283|Name=jgi.p|Nanoce1779_2|559338|organism=Nannochloropsis oceanica|type=CDS|length=3330bp|location=Sequence derived from alignment at scaffold_23:266122..268189- (Nannochloropsis oceanica)
GAGGAGGGGTGGAGGATGTCCATGAAGAAGAAGATGGTTGTGGGTGGTAA
TGGAGTAGGAGAGGGGGGAGGAGGGAAGAAAAGTGAACTGGAGAAACTGA
TGGAACAGGACACGGCGCGCAAGGCGGCAGAGGCGGCGGCTAGGAAGAAA
AGGGAAGAAGTGGAGGAGGAAATGGGGGATGGCGGGATGGAGGAGGGGCG
GACAGAGAACTGGTTGATGGAGGGAATAGTTGTAAAGATTGTGAATAAAA
AGATAGGAGGTGGAAAGTACTACAAGCAGAAGGGTCGGGTTGAGAAGCTA
CTGGAGGGAGGGTTTGTAGGCGAGATATGCCTGACGGGGGAGGAAGGAGG
GAGGGAGGGAGGAAGAGGAGGAGGAGGGGTGAGATTGCGGATCGATCAGG
AGGAGTTGGAGACGGTGATTCCGGCAGTGGGTGGAAGAGTGTTGATTTTG
AATGGCAAGGGGAAGGGGAGGGAAGGAGAAATGGTGGGGTTGGACGTGGA
GAACTATGCATGTGCGGTGCGGGTGCGAGGAGAGAGGGAGATGGTCTTGA
AGGGAGTGCAGTATGAGGATGTGTGTAAGGTGGATCGGGATTGGCTTCGA
GGGGGAGGAGGACGTTGAGTGATGGAAAAATTTTCTTCAGAGTTCGAGGA
GAATTATCTCGAGACCCTCTCTCGGCTACATGGCACCAAGCGCGTCCCGG
CTAACCAGGTCTATCAAGAACTGATCTGCAACAAGACACACATCCACATG
AACGCGACCAAGTGGGACGCCCTCACCACTTTCATCAAGTACCTAGGGAA
GAAGGGCCTGTGCCTGGTAGATGAAACGGAAAAGGGTTGGTTCGTCCAAT
GGATTGATCGGGAATACTTGAAACGAAGGGAAGAAATCGAGAAGGCCAGG
AAGGAGGAGGTAGAGGAAGAGATGCCCAAAGCCGCGGCCGGCACGCCCAA
GGCCATTGCCAACAAAGCCAAAAGCAAGGGCCTGCAACGTCTGCGATGGT
ACTGCCAAATGTGCGAGAAGCAATGCCGGGATGAGAATGGGTTCAAGTGC
CACACCATGTCCGAGAGCCATTTGCGACAGATGCGGGTGTACGCGGAGAA
TCCCACGCAGGAGGAGGGGTGGAGGATGTCCATGAAGAAGAAGATGGTTG
TGGGTGGTAATGGAGTAGGAGAGGGGGGAGGAGGGAAGAAAAGTGAACTG
GAGAAACTGATGGAACAGGACACGGCGCGCAAGGCGGCAGAGGCGGCGGC
TAGGAAGAAAAGGGAAGAAGTGGAGGAGGAAATGGGGGATGGCGGGATGG
AGGAGGGGCGGACAGAGAACTGGTTGATGGAGGGAATAGTTGTAAAGATT
GTGAATAAAAAGATAGGAGGTGGAAAGTACTACAAGCAGAAGGGTCGGGT
TGAGAAGCTACTGGAGGGAGGGTTTGTAGGCGAGATATGCCTGACGGGGG
AGGAAGGAGGGAGGGAGGGAGGAAGAGGAGGAGGAGGGGTGAGATTGCGG
ATCGATCAGGAGGAGTTGGAGACGGTGATTCCGGCAGTGGGTGGAAGAGT
GTTGATTTTGAATGGCAAGGGGAAGGGGAGGGAAGGAGAAATGGTGGGGT
TGGACGTGGAGAACTATGCATGTGCGGTGCGGGTGCGAGGAGAGAGGGAG
ATGGTCTTGAAGGGAGTGCAGTATGAGGATGTGTGTAAGGTGGATCGGGA
TTGGCTTCGAGGGGGAGGAGGACGTTGAGTGATGGAAAAATTTTCTTCAG
AGTTCGAGGAGAATTATCTCGAGACCCTCTCTCGGCTACATGGCACCAAG
CGCGTCCCGGCTAACCAGGTCTATCAAGAACTGATCTGCAACAAGACACA
CATCCACATGAACGCGACCAAGTGGGACGCCCTCACCACTTTCATCAAGT
ACCTAGGGAAGAAGGGCCTGTGCCTGGTAGATGAAACGGAAAAGGGTTGG
TTCGTCCAATGGATTGATCGGGAATACTTGAAACGAAGGGAAGAAATCGA
GAAGGCCAGGAAGGAGGAGGTAGAGGAAGAGATGCCCAAAGCCGCGGCCG
GCACGCCCAAGGCCATTGCCAACAAAGCCAAAAGCAAGGGCCTGCAACGT
CTGCGATGGTACTGCCAAATGTGCGAGAAGCAATGCCGGGATGAGAATGG
GTTCAAGTGCCACACCATGTCCGAGAGCCATTTGCGACAGATGCGGGTGT
ACGCGGAGAATCCCACGCAGGAGGAGGGGTGGAGGATGTCCATGAAGAAG
AAGATGGTTGTGGGTGGTAATGGAGTAGGAGAGGGGGGAGGAGGGAAGAA
AAGTGAACTGGAGAAACTGATGGAACAGGACACGGCGCGCAAGGCGGCAG
AGGCGGCGGCTAGGAAGAAAAGGGAAGAAGTGGAGGAGGAAATGGGGGAT
GGCGGGATGGAGGAGGGGCGGACAGAGAACTGGTTGATGGAGGGAATAGT
TGTAAAGATTGTGAATAAAAAGATAGGAGGTGGAAAGTACTACAAGCAGA
AGGGTCGGGTTGAGAAGCTACTGGAGGGAGGGTTTGTAGGCGAGATATGC
CTGACGGGGGAGGAAGGAGGGAGGGAGGGAGGAAGAGGAGGAGGAGGGGT
GAGATTGCGGATCGATCAGGAGGAGTTGGAGACGGTGATTCCGGCAGTGG
GTGGAAGAGTGTTGATTTTGAATGGCAAGGGGAAGGGGAGGGAAGGAGAA
ATGGTGGGGTTGGACGTGGAGAACTATGCATGTGCGGTGCGGGTGCGAGG
AGAGAGGGAGATGGTCTTGAAGGGAGTGCAGTATGAGGATGTGTGTAAGG
TGGATCGGGATTGGCTTCGAGGGGGAGGAGGACGTTGAGTGATGGAAAAA
TTTTCTTCAGAGTTCGAGGAGAATTATCTCGAGACCCTCTCTCGGCTACA
TGGCACCAAGCGCGTCCCGGCTAACCAGGTCTATCAAGAACTGATCTGCA
ACAAGACACACATCCACATGAACGCGACCAAGTGGGACGCCCTCACCACT
TTCATCAAGTACCTAGGGAAGAAGGGCCTGTGCCTGGTAGATGAAACGGA
AAAGGGTTGGTTCGTCCAATGGATTGATCGGGAATACTTGAAACGAAGGG
AAGAAATCGAGAAGGCCAGGAAGGAGGAGGTAGAGGAAGAGATGCCCAAA
GCCGCGGCCGGCACGCCCAAGGCCATTGCCAACAAAGCCAAAAGCAAGGG
CCTGCAACGTCTGCGATGGTACTGCCAAATGTGCGAGAAGCAATGCCGGG
ATGAGAATGGGTTCAAGTGCCACACCATGTCCGAGAGCCATTTGCGACAG
ATGCGGGTGTACGCGGAGAATCCCACGCAG back to top
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