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Properties
Property Name | Value |
TranscriptId | 601516 |
Track | FilteredModels2 |
ProteinId | 601430 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_23 | supercontig | scaffold_23:263614..266112 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8282 ID=mRNA_8282|Name=jgi.p|Nanoce1779_2|601430|organism=Nannochloropsis oceanica|type=mRNA|length=1507bp CAGATCTCGCCCATTCTCGGCAACTACCATACTGGAAGCTCTCTTCTTCT GATCCTTGCCTCTACAAATCACCACCATCGCCACCACTACCATTGGACGC AAGCATGTCCCGGAAACGCACCGCTTCCGGCAGCGGTGAGAAGGAGGAGA CCCAGTATGATGCGACGGAGGAGGTGGAGTTCACTGTCACGAAGGATGTG GAAGTCAAGGCAACATTCGAGGCCATGGGATTGCGCCCGGAGTTGTTGCG AGGTATCTACGACTACGGCTTTGAAAAACCTTCCGCCATCCAACAACGCG CCGTCTTGCCTATCATCAAAGGGTATGATATCATTGCTCAGTCGCAGTCG GGGACGGGGAAGACGGCTGTGTTCTCGATGGGCATCCTGCAGCGCTTGGA CACGACCAGTAATGACACCCAGGCACTTGTACTCTCCCCTACCCGTGAAC TAGCCGAGCAAACCCAGAAGGTCCTGCTCTCTCTGGGTGACTACATGAAC GTGCAATGTCATGCCTGCATCGGGGGGAAGAGTATTGGGGAGGACATCCG GCGATTGGACTATGGAGTGCAAGTCGTGTCCGGGACACCCGGGCGCGTGT TTGACATGATCCGTCGTCGAAATCTCAAGACCAAGAGCTTGAAGATGCTG GTGATCGATGAAGCGGACGAGATGCTCAACAAGGGATTCAAGGAACAGAT CTATGACATTTACCGGTACCTACCCCCGACGACGCAAGTGGTGTTGATCA GCGCCACCTTGCCTCAGGAGGTCCTCGACATGACCAAAAAATTTATGAAT GAACCGATTAAGGTGCTGGTAAAACGCGATGAGTTAACCTTGGAAGGGAT CAAGCAGTTCTTCGTGGCGGTGGAGAAGGAGGAGTGGAAATTCGATACCT TGTGCGACTTGTACGACACGCTCACCATCACCCAGGCGGTCATATTCTGC AATACGCGCAAGAAGGTGGACTGGCTGCGAAACAAGATGGTGGAAGCCAA TTTCACGGTGTCAGCCATGCATGGAGACATGCCACAGAAGGAGCGGGAGG CGATTATGGAGGAGTTCCGGTCGGGGGCAACACGCGTGTTGATCGCCACG GACGTGTGGGGGCGAGGCTTGGATGTGCAACAGGTGTCTTTGGTGATCAA TTATGACCTGCCCAACAACCGCGAGCTTTACATTCACCGCATTGGTCGGT CGGGGAGGTTTGGAAGGAAGGGGGTGGCGATCAATTTTGTGAGGAATGAT GATATCAGTATATTAAGAGATATAGAGCAGTTCTTCGGCACGATTATAGA TGAAATGCCTTTGCAGATAGGTGATCTGGTTTGAGGAGAAGGGGATGGGT CGTGGTGGTGGTGGAGAAGGGAGGGCTTTAAATGGGTTTCAGTTTGTTTT GGGGGGAATACGGGACAGACGAAAAAGACGATGGGTAAGCGAGCAAACGT GACGCGATACGAAGAAGAATAAAGATCGATGAACACCATGGCATTGAACA AAACAAA back to topprotein sequence of jgi.p|Nanoce1779_2|601430 >mRNA_8282-protein ID=mRNA_8282-protein|Name=jgi.p|Nanoce1779_2|601430|organism=Nannochloropsis oceanica|type=polypeptide|length=410bp MSRKRTASGSGEKEETQYDATEEVEFTVTKDVEVKATFEAMGLRPELLRG IYDYGFEKPSAIQQRAVLPIIKGYDIIAQSQSGTGKTAVFSMGILQRLDT TSNDTQALVLSPTRELAEQTQKVLLSLGDYMNVQCHACIGGKSIGEDIRR LDYGVQVVSGTPGRVFDMIRRRNLKTKSLKMLVIDEADEMLNKGFKEQIY DIYRYLPPTTQVVLISATLPQEVLDMTKKFMNEPIKVLVKRDELTLEGIK QFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRKKVDWLRNKMVEANF TVSAMHGDMPQKEREAIMEEFRSGATRVLIATDVWGRGLDVQQVSLVINY DLPNNRELYIHRIGRSGRFGRKGVAINFVRNDDISILRDIEQFFGTIIDE MPLQIGDLV* back to topmRNA from alignment at scaffold_23:263614..266112+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8282 ID=mRNA_8282|Name=jgi.p|Nanoce1779_2|601430|organism=Nannochloropsis oceanica|type=mRNA|length=2499bp|location=Sequence derived from alignment at scaffold_23:263614..266112+ (Nannochloropsis oceanica) CAGATCTCGCCCATTCTCGGCAACTACCATACTGGAAGCTCTCTTCTTCT
GATCCTTGCCTCTACAAATCACCACCATCGCCACCACTACCATTGGACGC
AAGCATGTCCCGGAAACGCACCGCTTCCGGCAGCGGTGAGAAGGAGGAGA
CCCAGTATGATGCGACGGAGGAGGTGGAGTTCACTGTCACGAAGGATGTG
GAAGTCAAGGCAACATTCGAGGCCATGGGATTGCGCCCGGAGTTGTTGCG
AGGTAGGTGTTTCGATTATTGAGTAGTTGCTTCGTTGCTCACAGGGGATT
GAGCGTTTGTGTCTGTTTTCAGCGGAGTCTTCAGAGTGTTGAGTTCAGCT
TTTAACGGTCCGCCGTCCCTTCCCTCCCTCCCTCCTTCCCTCCCTTCCAC
AGGTATCTACGACTACGGCTTTGAAAAACCTTCCGCCATCCAACAACGCG
CCGTCTTGCCTATCATCAAAGGGTATGATATCATTGCTCAGTCGCAGTCG
GGGACGGGGAAGACGGCTGTGTTCTCGATGGGCATCCTGCAGCGCTTGGA
CACGACCAGTAATGACACCCAGGTACGCCTTTTTCTAGCTTTGTACTTGT
ATTTGTGACCGTATGAAAATATAAGCGCACGCCACCGTTAAATCTAAAAC
TTCTTGGACAAATACTTAGCGTACAATGGCACACACCTGCAAGCGGAGGT
ATGAGAAACTCAAATCAAAGCAAATCTTGCCTCGCTGATACATGTCCTCT
TCAACACACGCACACACAGGCACTTGTACTCTCCCCTACCCGTGAACTAG
CCGAGCAAACCCAGAAGGTCCTGCTCTCTCTGGGTGACTACATGAACGTG
CAATGTCATGCCTGCATCGGGGGGAAGAGTATTGGGGAGGACATCCGGCG
ATTGGACTATGGAGTGCAAGTCGTGTCCGGGACACCCGGGCGCGTGTTTG
ACATGATCCGTCGTCGAAATCTCAAGACCAAGAGCTTGAAGATGCTGGTG
ATCGATGAAGCGGACGAGATGCTCAACAAGGGATTCAAGGAACAGATCTA
TGACATTTACCGGTACCTACCCCCGACGACGCAAGTGGTGTTGATCAGCG
CCACCTTGCCTCAGGAGGTCCTCGACATGACCAAAAAATTTATGAATGAA
CCGATTAAGGTGCTGGTAAAACGCGATGAGTTAACCTTGGAAGGGATCAA
GCAGTTCTTCGTGGCGGTGGAGAAGGAGGAGTGGAAATTCGATACCTTGT
GCGACTTGTACGACACGCTCACCATCACCCAGGCGGTCATATTCTGCAAT
ACGCGCAAGAAGGTAGCAAGGGCGACAGGGAGGGAGGGAGGGAGGGAAGA
AGGATGGGGAAAACGGGAGGAAGGGGTCGGATATCTTTTCCCCCAGCCTT
AAATCACAAGGGCGGAGACAGTGCATGTTATCCACTTCGTATTGATTATG
ATCCGCTTTTTCTCTCTTACATTGTCATGGCCTCTATACTAATTCACACC
TATCCCTTCCTTCCTTCCCTTCCCTCTCTCCCGTCTAGGTGGACTGGCTG
CGAAACAAGATGGTGGAAGCCAATTTCACGGTGTCAGCCATGCATGGAGA
CATGCCACAGAAGGAGCGGGAGGCGATTATGGAGGAGTTCCGGTCGGGGG
CAACACGCGTGTTGATCGCCACGGACGTGTGGGGGCGAGGCTTGGATGTG
CAACAGGTACGTTCTTGACATTCCTTTTTTTCAAAAAAAAATTATTGAAT
TATTGTTTTACTCTTCTTTATTTCTTCATTAAATTCAATTTCATTTTTTT
ATTATTTTTTCTTATTTTATTTTTTTTTAAATCAAAAAATATTCCTATGT
GCTTATTTGCTTTAATCATATGATATACACCCTTGCTTTGGTAATAGAGG
TGAAAGAAGATTGCATATATATATGTATAAATATATGTATGTATATATAT
GTATATATACCCTTGCTTTAGTAAGAGAGGGGAAAGAGGACTGCGAGGTA
TACTCGTTTTGGACTAGATTTCGTATTTCCCACTTCACTTTCCGTCTCTG
TATGGCCTAATGCGTCCACACTTACACACGCCAAATTAATGCACCCCATG
CACACGCACACACTTTCTCTTTTAGGTGTCTTTGGTGATCAATTATGACC
TGCCCAACAACCGCGAGCTTTACATTCACCGCATTGGTCGGTCGGGGAGG
TTTGGAAGGAAGGGGGTGGCGATCAATTTTGTGAGGAATGATGATATCAG
TATATTAAGAGATATAGAGCAGTTCTTCGGCACGATTATAGATGAAATGC
CTTTGCAGATAGGTGATCTGGTTTGAGGAGAAGGGGATGGGTCGTGGTGG
TGGTGGAGAAGGGAGGGCTTTAAATGGGTTTCAGTTTGTTTTGGGGGGAA
TACGGGACAGACGAAAAAGACGATGGGTAAGCGAGCAAACGTGACGCGAT
ACGAAGAAGAATAAAGATCGATGAACACCATGGCATTGAACAAAACAAA back to topCoding sequence (CDS) from alignment at scaffold_23:263614..266112+ >mRNA_8282 ID=mRNA_8282|Name=jgi.p|Nanoce1779_2|601430|organism=Nannochloropsis oceanica|type=CDS|length=6150bp|location=Sequence derived from alignment at scaffold_23:263614..266112+ (Nannochloropsis oceanica) ATGTCCCGGAAACGCACCGCTTCCGGCAGCGGTGAGAAGGAGGAGACCCA GTATGATGCGACGGAGGAGGTGGAGTTCACTGTCACGAAGGATGTGGAAG TCAAGGCAACATTCGAGGCCATGGGATTGCGCCCGGAGTTGTTGCGAGGT ATCTACGACTACGGCTTTGAAAAACCTTCCGCCATCCAACAACGCGCCGT CTTGCCTATCATCAAAGGGTATGATATCATTGCTCAGTCGCAGTCGGGGA CGGGGAAGACGGCTGTGTTCTCGATGGGCATCCTGCAGCGCTTGGACACG ACCAGTAATGACACCCAGGCACTTGTACTCTCCCCTACCCGTGAACTAGC CGAGCAAACCCAGAAGGTCCTGCTCTCTCTGGGTGACTACATGAACGTGC AATGTCATGCCTGCATCGGGGGGAAGAGTATTGGGGAGGACATCCGGCGA TTGGACTATGGAGTGCAAGTCGTGTCCGGGACACCCGGGCGCGTGTTTGA CATGATCCGTCGTCGAAATCTCAAGACCAAGAGCTTGAAGATGCTGGTGA TCGATGAAGCGGACGAGATGCTCAACAAGGGATTCAAGGAACAGATCTAT GACATTTACCGGTACCTACCCCCGACGACGCAAGTGGTGTTGATCAGCGC CACCTTGCCTCAGGAGGTCCTCGACATGACCAAAAAATTTATGAATGAAC CGATTAAGGTGCTGGTAAAACGCGATGAGTTAACCTTGGAAGGGATCAAG CAGTTCTTCGTGGCGGTGGAGAAGGAGGAGTGGAAATTCGATACCTTGTG CGACTTGTACGACACGCTCACCATCACCCAGGCGGTCATATTCTGCAATA CGCGCAAGAAGGTGGACTGGCTGCGAAACAAGATGGTGGAAGCCAATTTC ACGGTGTCAGCCATGCATGGAGACATGCCACAGAAGGAGCGGGAGGCGAT TATGGAGGAGTTCCGGTCGGGGGCAACACGCGTGTTGATCGCCACGGACG TGTGGGGGCGAGGCTTGGATGTGCAACAGGTGTCTTTGGTGATCAATTAT GACCTGCCCAACAACCGCGAGCTTTACATTCACCGCATTGGTCGGTCGGG GAGGTTTGGAAGGAAGGGGGTGGCGATCAATTTTGTGAGGAATGATGATA TCAGTATATTAAGAGATATAGAGCAGTTCTTCGGCACGATTATAGATGAA ATGCCTTTGCAGATAGGTGATCTGGTTTGAATGTCCCGGAAACGCACCGC TTCCGGCAGCGGTGAGAAGGAGGAGACCCAGTATGATGCGACGGAGGAGG TGGAGTTCACTGTCACGAAGGATGTGGAAGTCAAGGCAACATTCGAGGCC ATGGGATTGCGCCCGGAGTTGTTGCGAGGTATCTACGACTACGGCTTTGA AAAACCTTCCGCCATCCAACAACGCGCCGTCTTGCCTATCATCAAAGGGT ATGATATCATTGCTCAGTCGCAGTCGGGGACGGGGAAGACGGCTGTGTTC TCGATGGGCATCCTGCAGCGCTTGGACACGACCAGTAATGACACCCAGGC ACTTGTACTCTCCCCTACCCGTGAACTAGCCGAGCAAACCCAGAAGGTCC TGCTCTCTCTGGGTGACTACATGAACGTGCAATGTCATGCCTGCATCGGG GGGAAGAGTATTGGGGAGGACATCCGGCGATTGGACTATGGAGTGCAAGT CGTGTCCGGGACACCCGGGCGCGTGTTTGACATGATCCGTCGTCGAAATC TCAAGACCAAGAGCTTGAAGATGCTGGTGATCGATGAAGCGGACGAGATG CTCAACAAGGGATTCAAGGAACAGATCTATGACATTTACCGGTACCTACC CCCGACGACGCAAGTGGTGTTGATCAGCGCCACCTTGCCTCAGGAGGTCC TCGACATGACCAAAAAATTTATGAATGAACCGATTAAGGTGCTGGTAAAA CGCGATGAGTTAACCTTGGAAGGGATCAAGCAGTTCTTCGTGGCGGTGGA GAAGGAGGAGTGGAAATTCGATACCTTGTGCGACTTGTACGACACGCTCA CCATCACCCAGGCGGTCATATTCTGCAATACGCGCAAGAAGGTGGACTGG CTGCGAAACAAGATGGTGGAAGCCAATTTCACGGTGTCAGCCATGCATGG AGACATGCCACAGAAGGAGCGGGAGGCGATTATGGAGGAGTTCCGGTCGG GGGCAACACGCGTGTTGATCGCCACGGACGTGTGGGGGCGAGGCTTGGAT GTGCAACAGGTGTCTTTGGTGATCAATTATGACCTGCCCAACAACCGCGA GCTTTACATTCACCGCATTGGTCGGTCGGGGAGGTTTGGAAGGAAGGGGG TGGCGATCAATTTTGTGAGGAATGATGATATCAGTATATTAAGAGATATA GAGCAGTTCTTCGGCACGATTATAGATGAAATGCCTTTGCAGATAGGTGA TCTGGTTTGAATGTCCCGGAAACGCACCGCTTCCGGCAGCGGTGAGAAGG AGGAGACCCAGTATGATGCGACGGAGGAGGTGGAGTTCACTGTCACGAAG GATGTGGAAGTCAAGGCAACATTCGAGGCCATGGGATTGCGCCCGGAGTT GTTGCGAGGTATCTACGACTACGGCTTTGAAAAACCTTCCGCCATCCAAC AACGCGCCGTCTTGCCTATCATCAAAGGGTATGATATCATTGCTCAGTCG CAGTCGGGGACGGGGAAGACGGCTGTGTTCTCGATGGGCATCCTGCAGCG CTTGGACACGACCAGTAATGACACCCAGGCACTTGTACTCTCCCCTACCC GTGAACTAGCCGAGCAAACCCAGAAGGTCCTGCTCTCTCTGGGTGACTAC ATGAACGTGCAATGTCATGCCTGCATCGGGGGGAAGAGTATTGGGGAGGA CATCCGGCGATTGGACTATGGAGTGCAAGTCGTGTCCGGGACACCCGGGC GCGTGTTTGACATGATCCGTCGTCGAAATCTCAAGACCAAGAGCTTGAAG ATGCTGGTGATCGATGAAGCGGACGAGATGCTCAACAAGGGATTCAAGGA ACAGATCTATGACATTTACCGGTACCTACCCCCGACGACGCAAGTGGTGT TGATCAGCGCCACCTTGCCTCAGGAGGTCCTCGACATGACCAAAAAATTT ATGAATGAACCGATTAAGGTGCTGGTAAAACGCGATGAGTTAACCTTGGA AGGGATCAAGCAGTTCTTCGTGGCGGTGGAGAAGGAGGAGTGGAAATTCG ATACCTTGTGCGACTTGTACGACACGCTCACCATCACCCAGGCGGTCATA TTCTGCAATACGCGCAAGAAGGTGGACTGGCTGCGAAACAAGATGGTGGA AGCCAATTTCACGGTGTCAGCCATGCATGGAGACATGCCACAGAAGGAGC GGGAGGCGATTATGGAGGAGTTCCGGTCGGGGGCAACACGCGTGTTGATC GCCACGGACGTGTGGGGGCGAGGCTTGGATGTGCAACAGGTGTCTTTGGT GATCAATTATGACCTGCCCAACAACCGCGAGCTTTACATTCACCGCATTG GTCGGTCGGGGAGGTTTGGAAGGAAGGGGGTGGCGATCAATTTTGTGAGG AATGATGATATCAGTATATTAAGAGATATAGAGCAGTTCTTCGGCACGAT TATAGATGAAATGCCTTTGCAGATAGGTGATCTGGTTTGAATGTCCCGGA AACGCACCGCTTCCGGCAGCGGTGAGAAGGAGGAGACCCAGTATGATGCG ACGGAGGAGGTGGAGTTCACTGTCACGAAGGATGTGGAAGTCAAGGCAAC ATTCGAGGCCATGGGATTGCGCCCGGAGTTGTTGCGAGGTATCTACGACT ACGGCTTTGAAAAACCTTCCGCCATCCAACAACGCGCCGTCTTGCCTATC ATCAAAGGGTATGATATCATTGCTCAGTCGCAGTCGGGGACGGGGAAGAC GGCTGTGTTCTCGATGGGCATCCTGCAGCGCTTGGACACGACCAGTAATG ACACCCAGGCACTTGTACTCTCCCCTACCCGTGAACTAGCCGAGCAAACC CAGAAGGTCCTGCTCTCTCTGGGTGACTACATGAACGTGCAATGTCATGC CTGCATCGGGGGGAAGAGTATTGGGGAGGACATCCGGCGATTGGACTATG GAGTGCAAGTCGTGTCCGGGACACCCGGGCGCGTGTTTGACATGATCCGT CGTCGAAATCTCAAGACCAAGAGCTTGAAGATGCTGGTGATCGATGAAGC GGACGAGATGCTCAACAAGGGATTCAAGGAACAGATCTATGACATTTACC GGTACCTACCCCCGACGACGCAAGTGGTGTTGATCAGCGCCACCTTGCCT CAGGAGGTCCTCGACATGACCAAAAAATTTATGAATGAACCGATTAAGGT GCTGGTAAAACGCGATGAGTTAACCTTGGAAGGGATCAAGCAGTTCTTCG TGGCGGTGGAGAAGGAGGAGTGGAAATTCGATACCTTGTGCGACTTGTAC GACACGCTCACCATCACCCAGGCGGTCATATTCTGCAATACGCGCAAGAA GGTGGACTGGCTGCGAAACAAGATGGTGGAAGCCAATTTCACGGTGTCAG CCATGCATGGAGACATGCCACAGAAGGAGCGGGAGGCGATTATGGAGGAG TTCCGGTCGGGGGCAACACGCGTGTTGATCGCCACGGACGTGTGGGGGCG AGGCTTGGATGTGCAACAGGTGTCTTTGGTGATCAATTATGACCTGCCCA ACAACCGCGAGCTTTACATTCACCGCATTGGTCGGTCGGGGAGGTTTGGA AGGAAGGGGGTGGCGATCAATTTTGTGAGGAATGATGATATCAGTATATT AAGAGATATAGAGCAGTTCTTCGGCACGATTATAGATGAAATGCCTTTGC AGATAGGTGATCTGGTTTGAATGTCCCGGAAACGCACCGCTTCCGGCAGC GGTGAGAAGGAGGAGACCCAGTATGATGCGACGGAGGAGGTGGAGTTCAC TGTCACGAAGGATGTGGAAGTCAAGGCAACATTCGAGGCCATGGGATTGC GCCCGGAGTTGTTGCGAGGTATCTACGACTACGGCTTTGAAAAACCTTCC GCCATCCAACAACGCGCCGTCTTGCCTATCATCAAAGGGTATGATATCAT TGCTCAGTCGCAGTCGGGGACGGGGAAGACGGCTGTGTTCTCGATGGGCA TCCTGCAGCGCTTGGACACGACCAGTAATGACACCCAGGCACTTGTACTC TCCCCTACCCGTGAACTAGCCGAGCAAACCCAGAAGGTCCTGCTCTCTCT GGGTGACTACATGAACGTGCAATGTCATGCCTGCATCGGGGGGAAGAGTA TTGGGGAGGACATCCGGCGATTGGACTATGGAGTGCAAGTCGTGTCCGGG ACACCCGGGCGCGTGTTTGACATGATCCGTCGTCGAAATCTCAAGACCAA GAGCTTGAAGATGCTGGTGATCGATGAAGCGGACGAGATGCTCAACAAGG GATTCAAGGAACAGATCTATGACATTTACCGGTACCTACCCCCGACGACG CAAGTGGTGTTGATCAGCGCCACCTTGCCTCAGGAGGTCCTCGACATGAC CAAAAAATTTATGAATGAACCGATTAAGGTGCTGGTAAAACGCGATGAGT TAACCTTGGAAGGGATCAAGCAGTTCTTCGTGGCGGTGGAGAAGGAGGAG TGGAAATTCGATACCTTGTGCGACTTGTACGACACGCTCACCATCACCCA GGCGGTCATATTCTGCAATACGCGCAAGAAGGTGGACTGGCTGCGAAACA AGATGGTGGAAGCCAATTTCACGGTGTCAGCCATGCATGGAGACATGCCA CAGAAGGAGCGGGAGGCGATTATGGAGGAGTTCCGGTCGGGGGCAACACG CGTGTTGATCGCCACGGACGTGTGGGGGCGAGGCTTGGATGTGCAACAGG TGTCTTTGGTGATCAATTATGACCTGCCCAACAACCGCGAGCTTTACATT CACCGCATTGGTCGGTCGGGGAGGTTTGGAAGGAAGGGGGTGGCGATCAA TTTTGTGAGGAATGATGATATCAGTATATTAAGAGATATAGAGCAGTTCT TCGGCACGATTATAGATGAAATGCCTTTGCAGATAGGTGATCTGGTTTGA back to top
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