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Properties
| Property Name | Value |
|---|
| TranscriptId | 601455 |
| Track | FilteredModels2 |
| ProteinId | 601369 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_23 | supercontig | scaffold_23:223594..225384 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8264 ID=mRNA_8264|Name=jgi.p|Nanoce1779_2|601369|organism=Nannochloropsis oceanica|type=mRNA|length=1532bp
AAAGCATGAGCAGAGCAGAGATTCATGTGTCATGCCCTCCACCTGCTCTT
TGCCCGGTCCCGCCACCTAATCCACGTAACCGACGCGCGCCCACAACGCG
GCGGCAACGCCCTGTCGTCATGTCCAACCCCCTGCTCCTGCTCCTTGCCG
CCGGCATCACCGCCTCCAGCACCACATACGCTTTCATTTTTCCCCGAGTC
CCCAACAATGCTTACCCAAAAAGAGATGGATACTGTGACATCGGCGGCTG
CAGCAGCAGCACCAGCATCCTAGTGGGCATATCATCGCCGCAGCCTTCGC
ACCGCAGCAAAGGCGCCTGTCACGCAGCCCGCCTCGGCTCGCTTTCCCAC
GCCATGGGCAAGGCCAGGAAAAGGCTGTACATCAAGTTTCGAGTCAACGT
ATTGAAGAAATTCTCTCTTACCGCTCTGCGAGGTGGCCGTGGTCGCCTAG
GCCGAGCAGGCATCCCACACGACGAGGTCACCTTTCGTCGCCGCGGGCCC
GACCGCGAACTCACCAGCATTCCGCAAGCTGAGCGATACAGTAGCGGAGA
CTGGCTCCACAATATTTATAATTTGCCAGGCTCACAAGTCTTCCAACGAA
TCAAGGGCGTTATTATCCTAAACATGATTTGGGCGTTGCTTGTCACTGCT
GTGGGGACCTATTTGAACTTGCAAGCGATTCCGTCAAAGGTTCACACGCT
CCTAGGGAGTTCTCTGGGGTTGTTGCTTGTATTTCGGACCAATGCGTCTT
ATGCCCGGTATTGGGAAGGCAGGGCATTATGGGAAAAACTGCACAGTAAA
ACAAGGGACTTAGCGAGGATGATAAGTGTGTATGAAGATTGTTTGAGTAC
GGAGAAAGTCACTTCAGTCGCGCGATTAATTTGCGCGTACCCGCTTGTGC
TACGGGAGCACTTGACAGGGGAAACACATAAGTCGGATCTGATTCGCTTG
TTGGGTCCTGCGCTCAGTGATACGATGGACTGCAGTGTCAATAAACCCTT
GTGGGTTTGTAACAGGCTGGCGCTCCTCTTTCGTGGGGTCCCGGAGAGCA
TTAATTTCTCGTCGCGCGAACGCTTAGTCTTAATAGGACTCGTAAACGAT
CTAAGCAGTATCATCGGTTCCTGTGAACGCCTGGTCCAGACACCTGTTCC
CCTCTCGTACGCGCGACATACCTCGCGTTTTCTTACGCTGTACCTGTGGT
CGTTACCCATGGTCCTAGTCTCGGACCTTGCGCCGGTTTCCCTTGTATTG
GTCACAGGGTTATGTACTTGGGCGCTTTTCGGCATCCTGGAGATTGGCCT
GTTGATAGAAGATCCGTTTCAACGCGTCCTTAAAACGAGCTGGACAGGTG
TCATAGCCGAGACTGTCATGCGTGACGTGCAATGGAATATCGCTGAAAAC
AGAGGGAGTAGTAGCGGGGCCTCAAGTCGCGAACCTCCCTATTCTGCAGG
GACCGCTGCAACGACAGCAGCGGCATCAGCAGTAGCAGCAGCCAGATTTA
ATGGGATGTAGCTTTCGTTATTGTGAAGGGGG back to topprotein sequence of jgi.p|Nanoce1779_2|601369 >mRNA_8264-protein ID=mRNA_8264-protein|Name=jgi.p|Nanoce1779_2|601369|organism=Nannochloropsis oceanica|type=polypeptide|length=502bp
MSRAEIHVSCPPPALCPVPPPNPRNRRAPTTRRQRPVVMSNPLLLLLAAG
ITASSTTYAFIFPRVPNNAYPKRDGYCDIGGCSSSTSILVGISSPQPSHR
SKGACHAARLGSLSHAMGKARKRLYIKFRVNVLKKFSLTALRGGRGRLGR
AGIPHDEVTFRRRGPDRELTSIPQAERYSSGDWLHNIYNLPGSQVFQRIK
GVIILNMIWALLVTAVGTYLNLQAIPSKVHTLLGSSLGLLLVFRTNASYA
RYWEGRALWEKLHSKTRDLARMISVYEDCLSTEKVTSVARLICAYPLVLR
EHLTGETHKSDLIRLLGPALSDTMDCSVNKPLWVCNRLALLFRGVPESIN
FSSRERLVLIGLVNDLSSIIGSCERLVQTPVPLSYARHTSRFLTLYLWSL
PMVLVSDLAPVSLVLVTGLCTWALFGILEIGLLIEDPFQRVLKTSWTGVI
AETVMRDVQWNIAENRGSSSGASSREPPYSAGTAATTAAASAVAAARFNG
M* back to topmRNA from alignment at scaffold_23:223594..225384- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8264 ID=mRNA_8264|Name=jgi.p|Nanoce1779_2|601369|organism=Nannochloropsis oceanica|type=mRNA|length=1791bp|location=Sequence derived from alignment at scaffold_23:223594..225384- (Nannochloropsis oceanica)
AAAGCATGAGCAGAGCAGAGATTCATGTGTCATGCCCTCCACCTGCTCTT
TGCCCGGTCCCGCCACCTAATCCACGTAACCGACGCGCGCCCACAACGCG
GCGGCAACGCCCTGTCGTCATGTCCAACCCCCTGCTCCTGCTCCTTGCCG
CCGGCATCACCGCCTCCAGCACCACATACGCTTTCATTTTTCCCCGAGTC
CCCAACAATGCTTACCCAAAAAGAGATGGATACTGTGACATCGGCGGCTG
CAGCAGCAGCACCAGCATCCTAGTGGGCATATCATCGCCGCAGCCTTCGC
ACCGCAGCAAAGGCGCCTGTCACGCAGCCCGCCTCGGCTCGCTTTCCCAC
GCCATGGGCAAGGCCAGGAAAAGGCTGTACATCAAGTTTCGAGTCAACGT
ATTGAAGAAATTCTCTCTTACCGCTCTGCGAGGTGGCCGTGGTCGCCTAG
GCCGAGCAGGCATCCCACACGACGAGGTCACCTTTCGTCGCCGCGGGCCC
GACCGCGAACTCACCAGCATTCCGCAAGCTGAGCGATACAGTAGCGGAGA
CTGGCTCCACAATATTTATAATTTGCCAGGTATAGTCTTGTTCACTCTAT
TCTTCCATTTAATCTCTGCTTTCTTACCTCCTGCTCTCCGCAGCCGTTCA
CTCACACCTCCCCCCCTACGTACCTCACTTTCTCCCTTTTTTCCCAAGGC
TCACAAGTCTTCCAACGAATCAAGGGCGTTATTATCCTAAACATGATTTG
GGCGTTGCTTGTCACTGCTGTGGGGACCTATTTGAACTTGCAAGCGATTC
CGTCAAAGGTTCACACGCTCCTAGGGAGTTCTCTGGGGTTGTTGCTTGTA
TTTCGGACCAATGCGTCTTATGCCCGGTATTGGGAAGGCAGGGCATTATG
GGAAAAACTGCACAGTAAAACAAGGGACTTAGCGAGGATGATAAGTGTGT
ATGAAGATTGTTTGAGTACGGAGAAAGTCACTTCAGTCGCGCGATTAATT
TGCGCGTACCCGCTTGTGCTACGGGAGCACTTGACAGGGGAAACACATAA
GTCGGATCTGATTCGCTTGTTGGGTCCTGCGCTCAGTGATACGATGGACT
GCAGTGTCAATAAACCCTTGTGGGTTTGTAACAGGCTGGCGCTCCTCTTT
CGTGGGGTCCCGGAGAGCATTAATTTCTCGTCGCGCGAACGCTTAGTCTT
AATAGGACTCGTAAACGATCTAAGCAGTATCATCGGTTCCTGTGAACGCC
TGGTCCAGACACCTGTTCCCCTCTCGTACGCGCGACATACCTCGCGTTTT
CTTACGCTGTACCTGTGGTCGTTACCCATGGTCCTAGTCTCGGACCTTGC
GCCGGTTTCCCTTGTATTGGTCACAGGGTTATGTACTTGGGCGCTTTTCG
GCATCCTGGAGATTGGCCTGTTGATAGAAGATCCGTTTCAACGCGTCCTT
AAAACGAGCTGGACAGGTGTCATAGCCGAGACTGTCATGTAAGTACAGGA
GAAAGGCACGGAAGGAAGGTGGGAAGAAAGATTAGTATTTTGTTCTTATT
TTGTTGGGCTTTACGCATGTATTCCATTCTCTTCACTCACTTGCCTTATA
TCTCCCACTTCAATTTATCATTACTCAGGCGTGACGTGCAATGGAATATC
GCTGAAAACAGAGGGAGTAGTAGCGGGGCCTCAAGTCGCGAACCTCCCTA
TTCTGCAGGGACCGCTGCAACGACAGCAGCGGCATCAGCAGTAGCAGCAG
CCAGATTTAATGGGATGTAGCTTTCGTTATTGTGAAGGGGG back to topCoding sequence (CDS) from alignment at scaffold_23:223594..225384- >mRNA_8264 ID=mRNA_8264|Name=jgi.p|Nanoce1779_2|601369|organism=Nannochloropsis oceanica|type=CDS|length=4518bp|location=Sequence derived from alignment at scaffold_23:223594..225384- (Nannochloropsis oceanica)
GCGTGACGTGCAATGGAATATCGCTGAAAACAGAGGGAGTAGTAGCGGGG
CCTCAAGTCGCGAACCTCCCTATTCTGCAGGGACCGCTGCAACGACAGCA
GCGGCATCAGCAGTAGCAGCAGCCAGATTTAATGGGATGTAGGCTCACAA
GTCTTCCAACGAATCAAGGGCGTTATTATCCTAAACATGATTTGGGCGTT
GCTTGTCACTGCTGTGGGGACCTATTTGAACTTGCAAGCGATTCCGTCAA
AGGTTCACACGCTCCTAGGGAGTTCTCTGGGGTTGTTGCTTGTATTTCGG
ACCAATGCGTCTTATGCCCGGTATTGGGAAGGCAGGGCATTATGGGAAAA
ACTGCACAGTAAAACAAGGGACTTAGCGAGGATGATAAGTGTGTATGAAG
ATTGTTTGAGTACGGAGAAAGTCACTTCAGTCGCGCGATTAATTTGCGCG
TACCCGCTTGTGCTACGGGAGCACTTGACAGGGGAAACACATAAGTCGGA
TCTGATTCGCTTGTTGGGTCCTGCGCTCAGTGATACGATGGACTGCAGTG
TCAATAAACCCTTGTGGGTTTGTAACAGGCTGGCGCTCCTCTTTCGTGGG
GTCCCGGAGAGCATTAATTTCTCGTCGCGCGAACGCTTAGTCTTAATAGG
ACTCGTAAACGATCTAAGCAGTATCATCGGTTCCTGTGAACGCCTGGTCC
AGACACCTGTTCCCCTCTCGTACGCGCGACATACCTCGCGTTTTCTTACG
CTGTACCTGTGGTCGTTACCCATGGTCCTAGTCTCGGACCTTGCGCCGGT
TTCCCTTGTATTGGTCACAGGGTTATGTACTTGGGCGCTTTTCGGCATCC
TGGAGATTGGCCTGTTGATAGAAGATCCGTTTCAACGCGTCCTTAAAACG
AGCTGGACAGGTGTCATAGCCGAGACTGTCATATGAGCAGAGCAGAGATT
CATGTGTCATGCCCTCCACCTGCTCTTTGCCCGGTCCCGCCACCTAATCC
ACGTAACCGACGCGCGCCCACAACGCGGCGGCAACGCCCTGTCGTCATGT
CCAACCCCCTGCTCCTGCTCCTTGCCGCCGGCATCACCGCCTCCAGCACC
ACATACGCTTTCATTTTTCCCCGAGTCCCCAACAATGCTTACCCAAAAAG
AGATGGATACTGTGACATCGGCGGCTGCAGCAGCAGCACCAGCATCCTAG
TGGGCATATCATCGCCGCAGCCTTCGCACCGCAGCAAAGGCGCCTGTCAC
GCAGCCCGCCTCGGCTCGCTTTCCCACGCCATGGGCAAGGCCAGGAAAAG
GCTGTACATCAAGTTTCGAGTCAACGTATTGAAGAAATTCTCTCTTACCG
CTCTGCGAGGTGGCCGTGGTCGCCTAGGCCGAGCAGGCATCCCACACGAC
GAGGTCACCTTTCGTCGCCGCGGGCCCGACCGCGAACTCACCAGCATTCC
GCAAGCTGAGCGATACAGTAGCGGAGACTGGCTCCACAATATTTATAATT
TGCCAGGCGTGACGTGCAATGGAATATCGCTGAAAACAGAGGGAGTAGTA
GCGGGGCCTCAAGTCGCGAACCTCCCTATTCTGCAGGGACCGCTGCAACG
ACAGCAGCGGCATCAGCAGTAGCAGCAGCCAGATTTAATGGGATGTAGGC
TCACAAGTCTTCCAACGAATCAAGGGCGTTATTATCCTAAACATGATTTG
GGCGTTGCTTGTCACTGCTGTGGGGACCTATTTGAACTTGCAAGCGATTC
CGTCAAAGGTTCACACGCTCCTAGGGAGTTCTCTGGGGTTGTTGCTTGTA
TTTCGGACCAATGCGTCTTATGCCCGGTATTGGGAAGGCAGGGCATTATG
GGAAAAACTGCACAGTAAAACAAGGGACTTAGCGAGGATGATAAGTGTGT
ATGAAGATTGTTTGAGTACGGAGAAAGTCACTTCAGTCGCGCGATTAATT
TGCGCGTACCCGCTTGTGCTACGGGAGCACTTGACAGGGGAAACACATAA
GTCGGATCTGATTCGCTTGTTGGGTCCTGCGCTCAGTGATACGATGGACT
GCAGTGTCAATAAACCCTTGTGGGTTTGTAACAGGCTGGCGCTCCTCTTT
CGTGGGGTCCCGGAGAGCATTAATTTCTCGTCGCGCGAACGCTTAGTCTT
AATAGGACTCGTAAACGATCTAAGCAGTATCATCGGTTCCTGTGAACGCC
TGGTCCAGACACCTGTTCCCCTCTCGTACGCGCGACATACCTCGCGTTTT
CTTACGCTGTACCTGTGGTCGTTACCCATGGTCCTAGTCTCGGACCTTGC
GCCGGTTTCCCTTGTATTGGTCACAGGGTTATGTACTTGGGCGCTTTTCG
GCATCCTGGAGATTGGCCTGTTGATAGAAGATCCGTTTCAACGCGTCCTT
AAAACGAGCTGGACAGGTGTCATAGCCGAGACTGTCATATGAGCAGAGCA
GAGATTCATGTGTCATGCCCTCCACCTGCTCTTTGCCCGGTCCCGCCACC
TAATCCACGTAACCGACGCGCGCCCACAACGCGGCGGCAACGCCCTGTCG
TCATGTCCAACCCCCTGCTCCTGCTCCTTGCCGCCGGCATCACCGCCTCC
AGCACCACATACGCTTTCATTTTTCCCCGAGTCCCCAACAATGCTTACCC
AAAAAGAGATGGATACTGTGACATCGGCGGCTGCAGCAGCAGCACCAGCA
TCCTAGTGGGCATATCATCGCCGCAGCCTTCGCACCGCAGCAAAGGCGCC
TGTCACGCAGCCCGCCTCGGCTCGCTTTCCCACGCCATGGGCAAGGCCAG
GAAAAGGCTGTACATCAAGTTTCGAGTCAACGTATTGAAGAAATTCTCTC
TTACCGCTCTGCGAGGTGGCCGTGGTCGCCTAGGCCGAGCAGGCATCCCA
CACGACGAGGTCACCTTTCGTCGCCGCGGGCCCGACCGCGAACTCACCAG
CATTCCGCAAGCTGAGCGATACAGTAGCGGAGACTGGCTCCACAATATTT
ATAATTTGCCAGGCGTGACGTGCAATGGAATATCGCTGAAAACAGAGGGA
GTAGTAGCGGGGCCTCAAGTCGCGAACCTCCCTATTCTGCAGGGACCGCT
GCAACGACAGCAGCGGCATCAGCAGTAGCAGCAGCCAGATTTAATGGGAT
GTAGGCTCACAAGTCTTCCAACGAATCAAGGGCGTTATTATCCTAAACAT
GATTTGGGCGTTGCTTGTCACTGCTGTGGGGACCTATTTGAACTTGCAAG
CGATTCCGTCAAAGGTTCACACGCTCCTAGGGAGTTCTCTGGGGTTGTTG
CTTGTATTTCGGACCAATGCGTCTTATGCCCGGTATTGGGAAGGCAGGGC
ATTATGGGAAAAACTGCACAGTAAAACAAGGGACTTAGCGAGGATGATAA
GTGTGTATGAAGATTGTTTGAGTACGGAGAAAGTCACTTCAGTCGCGCGA
TTAATTTGCGCGTACCCGCTTGTGCTACGGGAGCACTTGACAGGGGAAAC
ACATAAGTCGGATCTGATTCGCTTGTTGGGTCCTGCGCTCAGTGATACGA
TGGACTGCAGTGTCAATAAACCCTTGTGGGTTTGTAACAGGCTGGCGCTC
CTCTTTCGTGGGGTCCCGGAGAGCATTAATTTCTCGTCGCGCGAACGCTT
AGTCTTAATAGGACTCGTAAACGATCTAAGCAGTATCATCGGTTCCTGTG
AACGCCTGGTCCAGACACCTGTTCCCCTCTCGTACGCGCGACATACCTCG
CGTTTTCTTACGCTGTACCTGTGGTCGTTACCCATGGTCCTAGTCTCGGA
CCTTGCGCCGGTTTCCCTTGTATTGGTCACAGGGTTATGTACTTGGGCGC
TTTTCGGCATCCTGGAGATTGGCCTGTTGATAGAAGATCCGTTTCAACGC
GTCCTTAAAACGAGCTGGACAGGTGTCATAGCCGAGACTGTCATATGAGC
AGAGCAGAGATTCATGTGTCATGCCCTCCACCTGCTCTTTGCCCGGTCCC
GCCACCTAATCCACGTAACCGACGCGCGCCCACAACGCGGCGGCAACGCC
CTGTCGTCATGTCCAACCCCCTGCTCCTGCTCCTTGCCGCCGGCATCACC
GCCTCCAGCACCACATACGCTTTCATTTTTCCCCGAGTCCCCAACAATGC
TTACCCAAAAAGAGATGGATACTGTGACATCGGCGGCTGCAGCAGCAGCA
CCAGCATCCTAGTGGGCATATCATCGCCGCAGCCTTCGCACCGCAGCAAA
GGCGCCTGTCACGCAGCCCGCCTCGGCTCGCTTTCCCACGCCATGGGCAA
GGCCAGGAAAAGGCTGTACATCAAGTTTCGAGTCAACGTATTGAAGAAAT
TCTCTCTTACCGCTCTGCGAGGTGGCCGTGGTCGCCTAGGCCGAGCAGGC
ATCCCACACGACGAGGTCACCTTTCGTCGCCGCGGGCCCGACCGCGAACT
CACCAGCATTCCGCAAGCTGAGCGATACAGTAGCGGAGACTGGCTCCACA
ATATTTATAATTTGCCAG back to top
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