|
Properties
Property Name | Value |
TranscriptId | 188152 |
Track | FilteredModels2 |
ProteinId | 188066 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_23 | supercontig | scaffold_23:192822..195214 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8251 ID=mRNA_8251|Name=jgi.p|Nanoce1779_2|188066|organism=Nannochloropsis oceanica|type=mRNA|length=2043bp GTGGTGTGCTGGCACCTTTTATCTGGCAGAGAAAGTCACGGGTTGGGGCG TAGCATTTTTCTTTCCCCCTCTGAGCGGGCTTCGTCGCATGATAAAATCC ACAGCGGGGGCGTCTTTTCCTTGAGCTTGTGTGCGGCTTTATATATACTT ATACACCCATGGCAACGCGCTAAATATGTCAAATGACTTTCAAGACAGGA AGATTCTGCCTTTTTCTTAGTTTTGACTGCTGTGGTAATGTCGTTGTTAG CCGACCTCCCACCCTCATTCAACCATCCCAGTGGACAGATGTTACCGCGA TAAAAGATTGAGATGGCAAAATCAACGACCCAAATACTCACGCGAATGCT TTCTGCCATACCATACGAAGATAGGTGTGTGGGCATGGCGAAGGTTGGCG TGATGCCACCGCCCCTCCCTGCTTTGGTGGAAGAAAAGCTAGGGGAGCAT GTCAACGTCGATGCGCAACAGCAGCAACGGCAGCAGCAGGAACAAGGGAA ACAGGATGGAGGGAAGGAGAAATTCAAGGGTGTTAGGAGAGAAAGGAATG GAGGAGAAGGAGAGGGGGTGATTCAGGAAGCTCCAGTGTTTTATCCGACA CAGGAGGAGTTTACTGACCCCCTGGCCTATATCTCTAGTATCCGCACTAT CGCCGAGCCCGCAGGCATTTGCCGTATCGTCCCTCCTAAGGAGTGGACGC CTCCCTTCACCATTGATCCTTCAACGTTCAAATTTCCGACGCGCGTACAG AATCTGTCGCGTCTTGGGGCCGCCTCTCGTCTCAGCAAGGATTTTGACAG GCTTTTGCGTCGCTTCATGTTCAAACGCGGCACGCCTCTCGCAGGTCCTG TCCCTATGCCCAAACCAGCAACAGCAGCAGCAGCAACGAGAAAGAAGGAG GAGAAAGGGAAGGAGCAGCAGCAGCAACAGCAAGAACAGCAGCCAGCTGA AATAGGAAGAAGCAGCAAGAGGAAACGTCCCCCTACCCCCTCCATTTCCA CCAACACCCCCCCTCCCTCCCTCCCTCCCTCTTCCCGCCCCCCTCAAGCT CCGGTTTTGAATCTGTATTCTCTCTATAAGGCTGTTGTGAGGGAGAGGGG AGGGTATGATAACGTCTGTCGTTTGGGACTGTGGGAGGCAGTTACTGAAG AGATAGGAGGAGGAGAAGAAGAATCAGAAGAAGAAGGGGAACGGGGAGGA GGAGTGAACAAGACTCAGGCCAAGAAAGTGAGGAATATTTACAGAGACCT GATCTTGCCATTTGAGAAATGGCAGGCGGGGAGGAAGGCAGCAGCAGCAG CAGCTGCTGCTGCTCCTCCTGCTCCTGCTACTACTACTGCTGCCGCTAGT AGGACTGCCGTCGGTGGGGGAGAAGGAGAAAGAGGACGGGAAGAAGGATA CGAAGCAGTAGCAGCAACCGCAACAGCAGTCGTAGAAGGAGTACAGGCGA CGACAAAGGCTGCAGAAGATGCCGCAACCCTGCCGACGACCAGCAGCAGC AGCAGCAGCAGCAGCAGCAGCAGCAATAGTAGTCGTGCTACTGATGTTCC AGTTTTTTCTTCCTCCTCCTCGACCAGCAGTAGCAGTAGCTGTAGCTGTA GCAGCAACAACAACAATAGCTCTACCACCACCTCCTCTACCTCATTTCCT GTTTCTGTGCTTAAGGAGATAAAGGAGGGCGGAAAAGAAAACGCAGTGGA AGAAGGGATCGACAAGCTGGCTCGGACCCGAGGACGGGCGAAGGGAGTGG CAGGAGTAGCAGCAGCAGCAACAGTAGCCTTGGGACAAATTCTTGATGCA GCCGCAAGTAGGAAAAAAGGAAGAGGAGGGGGAGGAAGAGGAGGACCAGG TGGAAGGGGAGGGGGAACGAGAGGAGGGGACGGAGGGGGAGGAGTCGCGT TCAATCCGAAAGAGTTTGTGGGGAGACAGTTCTGGAGGTATGTGTGCTCC CTCCTCCCTCCTTCCTTCCTTCTCTCCCTTATTCTATAAATTTCTCTACC ATCGTGTGGGCCTTGTCAAGACCGTCACGAAGAGACCCCAAAT back to topprotein sequence of jgi.p|Nanoce1779_2|188066 >mRNA_8251-protein ID=mRNA_8251-protein|Name=jgi.p|Nanoce1779_2|188066|organism=Nannochloropsis oceanica|type=polypeptide|length=559bp MAKSTTQILTRMLSAIPYEDRCVGMAKVGVMPPPLPALVEEKLGEHVNVD AQQQQRQQQEQGKQDGGKEKFKGVRRERNGGEGEGVIQEAPVFYPTQEEF TDPLAYISSIRTIAEPAGICRIVPPKEWTPPFTIDPSTFKFPTRVQNLSR LGAASRLSKDFDRLLRRFMFKRGTPLAGPVPMPKPATAAAATRKKEEKGK EQQQQQQEQQPAEIGRSSKRKRPPTPSISTNTPPPSLPPSSRPPQAPVLN LYSLYKAVVRERGGYDNVCRLGLWEAVTEEIGGGEEESEEEGERGGGVNK TQAKKVRNIYRDLILPFEKWQAGRKAAAAAAAAAPPAPATTTAAASRTAV GGGEGERGREEGYEAVAATATAVVEGVQATTKAAEDAATLPTTSSSSSSS SSSSNSSRATDVPVFSSSSSTSSSSSCSCSSNNNNSSTTTSSTSFPVSVL KEIKEGGKENAVEEGIDKLARTRGRAKGVAGVAAAATVALGQILDAAASR KKGRGGGGRGGPGGRGGGTRGGDGGGGVAFNPKEFVGRQFWRYVCSLLPP SFLLSLIL* back to topmRNA from alignment at scaffold_23:192822..195214+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8251 ID=mRNA_8251|Name=jgi.p|Nanoce1779_2|188066|organism=Nannochloropsis oceanica|type=mRNA|length=2393bp|location=Sequence derived from alignment at scaffold_23:192822..195214+ (Nannochloropsis oceanica) GTGGTGTGCTGGCACCTTTTATCTGGCAGAGAAAGTCACGGGTTGGGGCG
TAGCATTTTTCTTTCCCCCTCTGAGCGGGCTTCGTCGCATGATAAAATCC
ACAGCGGGGGCGTCTTTTCCTTGAGCTTGTGTGCGGCTTTATATATACTT
ATACACCCATGGCAACGCGCTAAATATGTCAAATGACTTTCAAGACAGGA
AGATTCTGCCTTTTTCTTAGTTTTGACTGCTGTGGTAATGTCGTTGTTAG
CCGACCTCCCACCCTCATTCAACCATCCCAGTGGACAGATGTTACCGCGA
TAAAAGATTGAGATGGCAAAATCAACGACCCAAATACTCACGCGAATGCT
TTCTGCCATACCATACGAAGATAGGTGTGTGGGCATGGCGAAGGTTGGCG
TGATGCCACCGCCCCTCCCTGCTTTGGTGGAAGAAAAGCTAGGGGAGCAT
GTCAACGTCGATGCGCAACAGCAGCAACGGCAGCAGCAGGAACAAGGGAA
ACAGGATGGAGGGAAGGAGAAATTCAAGGGTGTTAGGAGAGAAAGGAATG
GAGGAGAAGGAGAGGGGGTGATTCAGGAAGCTCCAGTGTTTTATCCGACA
CAGGAGGAGTTTACTGACCCCCTGGCCTATATCTCTAGGTACGTAAAAGA
CTGACGTATGTACTCTACCGTATTCTATCGTTCTAACATCCGCGTGATTT
TATGTATGATAGTGCAAGGAATAATTGAAGATATCTCGGGGGTCGTATCT
CACCATCCCTCCCTCCCTTTCTCCCTCTCTCCCCTCCTTCCCTTCTTCCC
TCCCTCCCTCCTTCCCTCCTCTTTCTTCCTTTTGAAAAGTATCCGCACTA
TCGCCGAGCCCGCAGGCATTTGCCGTATCGTCCCTCCTAAGGAGTGGACG
CCTCCCTTCACCATTGATCCTTCAACGTTCAAATTTCCGACGCGCGTACA
GAATCTGTCGCGTCTTGGGGTAAGCAAAGAGAACAAACCTTACCTCCCTC
GCTCTCCATCCCTCCCTCGCTCTCCCCCCCTCCCTCTCCTTCTCTCCCTC
CCACCTTTTCTCCCCCCTCCTCGGGGCTGCCAATCAACTCATTAATCCTT
TTCCCCTCCCTCTTCCAGGCCGCCTCTCGTCTCAGCAAGGATTTTGACAG
GCTTTTGCGTCGCTTCATGTTCAAACGCGGCACGCCTCTCGCAGGTCCTG
TCCCTATGCCCAAACCAGCAACAGCAGCAGCAGCAACGAGAAAGAAGGAG
GAGAAAGGGAAGGAGCAGCAGCAGCAACAGCAAGAACAGCAGCCAGCTGA
AATAGGAAGAAGCAGCAAGAGGAAACGTCCCCCTACCCCCTCCATTTCCA
CCAACACCCCCCCTCCCTCCCTCCCTCCCTCTTCCCGCCCCCCTCAAGCT
CCGGTTTTGAATCTGTATTCTCTCTATAAGGCTGTTGTGAGGGAGAGGGG
AGGGTATGATAACGTCTGTCGTTTGGGACTGTGGGAGGCAGTTACTGAAG
AGATAGGAGGAGGAGAAGAAGAATCAGAAGAAGAAGGGGAACGGGGAGGA
GGAGTGAACAAGACTCAGGCCAAGAAAGTGAGGAATATTTACAGAGACCT
GATCTTGCCATTTGAGAAATGGCAGGCGGGGAGGAAGGCAGCAGCAGCAG
CAGCTGCTGCTGCTCCTCCTGCTCCTGCTACTACTACTGCTGCCGCTAGT
AGGACTGCCGTCGGTGGGGGAGAAGGAGAAAGAGGACGGGAAGAAGGATA
CGAAGCAGTAGCAGCAACCGCAACAGCAGTCGTAGAAGGAGTACAGGCGA
CGACAAAGGCTGCAGAAGATGCCGCAACCCTGCCGACGACCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAATAGTAGTCGTGCTACTGATGTTCC
AGTTTTTTCTTCCTCCTCCTCGACCAGCAGTAGCAGTAGCTGTAGCTGTA
GCAGCAACAACAACAATAGCTCTACCACCACCTCCTCTACCTCATTTCCT
GTTTCTGTGCTTAAGGAGATAAAGGAGGGCGGAAAAGAAAACGCAGTGGA
AGAAGGGATCGACAAGCTGGCTCGGACCCGAGGACGGGCGAAGGGAGTGG
CAGGAGTAGCAGCAGCAGCAACAGTAGCCTTGGGACAAATTCTTGATGCA
GCCGCAAGTAGGAAAAAAGGAAGAGGAGGGGGAGGAAGAGGAGGACCAGG
TGGAAGGGGAGGGGGAACGAGAGGAGGGGACGGAGGGGGAGGAGTCGCGT
TCAATCCGAAAGAGTTTGTGGGGAGACAGTTCTGGAGGTATGTGTGCTCC
CTCCTCCCTCCTTCCTTCCTTCTCTCCCTTATTCTATAAATTTCTCTACC
ATCGTGTGGGCCTTGTCAAGACCGTCACGAAGAGACCCCAAAT back to topCoding sequence (CDS) from alignment at scaffold_23:192822..195214+ >mRNA_8251 ID=mRNA_8251|Name=jgi.p|Nanoce1779_2|188066|organism=Nannochloropsis oceanica|type=CDS|length=5031bp|location=Sequence derived from alignment at scaffold_23:192822..195214+ (Nannochloropsis oceanica) ATGGCAAAATCAACGACCCAAATACTCACGCGAATGCTTTCTGCCATACC ATACGAAGATAGGTGTGTGGGCATGGCGAAGGTTGGCGTGATGCCACCGC CCCTCCCTGCTTTGGTGGAAGAAAAGCTAGGGGAGCATGTCAACGTCGAT GCGCAACAGCAGCAACGGCAGCAGCAGGAACAAGGGAAACAGGATGGAGG GAAGGAGAAATTCAAGGGTGTTAGGAGAGAAAGGAATGGAGGAGAAGGAG AGGGGGTGATTCAGGAAGCTCCAGTGTTTTATCCGACACAGGAGGAGTTT ACTGACCCCCTGGCCTATATCTCTAGTATCCGCACTATCGCCGAGCCCGC AGGCATTTGCCGTATCGTCCCTCCTAAGGAGTGGACGCCTCCCTTCACCA TTGATCCTTCAACGTTCAAATTTCCGACGCGCGTACAGAATCTGTCGCGT CTTGGGGCCGCCTCTCGTCTCAGCAAGGATTTTGACAGGCTTTTGCGTCG CTTCATGTTCAAACGCGGCACGCCTCTCGCAGGTCCTGTCCCTATGCCCA AACCAGCAACAGCAGCAGCAGCAACGAGAAAGAAGGAGGAGAAAGGGAAG GAGCAGCAGCAGCAACAGCAAGAACAGCAGCCAGCTGAAATAGGAAGAAG CAGCAAGAGGAAACGTCCCCCTACCCCCTCCATTTCCACCAACACCCCCC CTCCCTCCCTCCCTCCCTCTTCCCGCCCCCCTCAAGCTCCGGTTTTGAAT CTGTATTCTCTCTATAAGGCTGTTGTGAGGGAGAGGGGAGGGTATGATAA CGTCTGTCGTTTGGGACTGTGGGAGGCAGTTACTGAAGAGATAGGAGGAG GAGAAGAAGAATCAGAAGAAGAAGGGGAACGGGGAGGAGGAGTGAACAAG ACTCAGGCCAAGAAAGTGAGGAATATTTACAGAGACCTGATCTTGCCATT TGAGAAATGGCAGGCGGGGAGGAAGGCAGCAGCAGCAGCAGCTGCTGCTG CTCCTCCTGCTCCTGCTACTACTACTGCTGCCGCTAGTAGGACTGCCGTC GGTGGGGGAGAAGGAGAAAGAGGACGGGAAGAAGGATACGAAGCAGTAGC AGCAACCGCAACAGCAGTCGTAGAAGGAGTACAGGCGACGACAAAGGCTG CAGAAGATGCCGCAACCCTGCCGACGACCAGCAGCAGCAGCAGCAGCAGC AGCAGCAGCAGCAATAGTAGTCGTGCTACTGATGTTCCAGTTTTTTCTTC CTCCTCCTCGACCAGCAGTAGCAGTAGCTGTAGCTGTAGCAGCAACAACA ACAATAGCTCTACCACCACCTCCTCTACCTCATTTCCTGTTTCTGTGCTT AAGGAGATAAAGGAGGGCGGAAAAGAAAACGCAGTGGAAGAAGGGATCGA CAAGCTGGCTCGGACCCGAGGACGGGCGAAGGGAGTGGCAGGAGTAGCAG CAGCAGCAACAGTAGCCTTGGGACAAATTCTTGATGCAGCCGCAAGTAGG AAAAAAGGAAGAGGAGGGGGAGGAAGAGGAGGACCAGGTGGAAGGGGAGG GGGAACGAGAGGAGGGGACGGAGGGGGAGGAGTCGCGTTCAATCCGAAAG AGTTTGTGGGGAGACAGTTCTGGAGGTATGTGTGCTCCCTCCTCCCTCCT TCCTTCCTTCTCTCCCTTATTCTATAAATGGCAAAATCAACGACCCAAAT ACTCACGCGAATGCTTTCTGCCATACCATACGAAGATAGGTGTGTGGGCA TGGCGAAGGTTGGCGTGATGCCACCGCCCCTCCCTGCTTTGGTGGAAGAA AAGCTAGGGGAGCATGTCAACGTCGATGCGCAACAGCAGCAACGGCAGCA GCAGGAACAAGGGAAACAGGATGGAGGGAAGGAGAAATTCAAGGGTGTTA GGAGAGAAAGGAATGGAGGAGAAGGAGAGGGGGTGATTCAGGAAGCTCCA GTGTTTTATCCGACACAGGAGGAGTTTACTGACCCCCTGGCCTATATCTC TAGTATCCGCACTATCGCCGAGCCCGCAGGCATTTGCCGTATCGTCCCTC CTAAGGAGTGGACGCCTCCCTTCACCATTGATCCTTCAACGTTCAAATTT CCGACGCGCGTACAGAATCTGTCGCGTCTTGGGGCCGCCTCTCGTCTCAG CAAGGATTTTGACAGGCTTTTGCGTCGCTTCATGTTCAAACGCGGCACGC CTCTCGCAGGTCCTGTCCCTATGCCCAAACCAGCAACAGCAGCAGCAGCA ACGAGAAAGAAGGAGGAGAAAGGGAAGGAGCAGCAGCAGCAACAGCAAGA ACAGCAGCCAGCTGAAATAGGAAGAAGCAGCAAGAGGAAACGTCCCCCTA CCCCCTCCATTTCCACCAACACCCCCCCTCCCTCCCTCCCTCCCTCTTCC CGCCCCCCTCAAGCTCCGGTTTTGAATCTGTATTCTCTCTATAAGGCTGT TGTGAGGGAGAGGGGAGGGTATGATAACGTCTGTCGTTTGGGACTGTGGG AGGCAGTTACTGAAGAGATAGGAGGAGGAGAAGAAGAATCAGAAGAAGAA GGGGAACGGGGAGGAGGAGTGAACAAGACTCAGGCCAAGAAAGTGAGGAA TATTTACAGAGACCTGATCTTGCCATTTGAGAAATGGCAGGCGGGGAGGA AGGCAGCAGCAGCAGCAGCTGCTGCTGCTCCTCCTGCTCCTGCTACTACT ACTGCTGCCGCTAGTAGGACTGCCGTCGGTGGGGGAGAAGGAGAAAGAGG ACGGGAAGAAGGATACGAAGCAGTAGCAGCAACCGCAACAGCAGTCGTAG AAGGAGTACAGGCGACGACAAAGGCTGCAGAAGATGCCGCAACCCTGCCG ACGACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAATAGTAGTCG TGCTACTGATGTTCCAGTTTTTTCTTCCTCCTCCTCGACCAGCAGTAGCA GTAGCTGTAGCTGTAGCAGCAACAACAACAATAGCTCTACCACCACCTCC TCTACCTCATTTCCTGTTTCTGTGCTTAAGGAGATAAAGGAGGGCGGAAA AGAAAACGCAGTGGAAGAAGGGATCGACAAGCTGGCTCGGACCCGAGGAC GGGCGAAGGGAGTGGCAGGAGTAGCAGCAGCAGCAACAGTAGCCTTGGGA CAAATTCTTGATGCAGCCGCAAGTAGGAAAAAAGGAAGAGGAGGGGGAGG AAGAGGAGGACCAGGTGGAAGGGGAGGGGGAACGAGAGGAGGGGACGGAG GGGGAGGAGTCGCGTTCAATCCGAAAGAGTTTGTGGGGAGACAGTTCTGG AGGTATGTGTGCTCCCTCCTCCCTCCTTCCTTCCTTCTCTCCCTTATTCT ATAAATGGCAAAATCAACGACCCAAATACTCACGCGAATGCTTTCTGCCA TACCATACGAAGATAGGTGTGTGGGCATGGCGAAGGTTGGCGTGATGCCA CCGCCCCTCCCTGCTTTGGTGGAAGAAAAGCTAGGGGAGCATGTCAACGT CGATGCGCAACAGCAGCAACGGCAGCAGCAGGAACAAGGGAAACAGGATG GAGGGAAGGAGAAATTCAAGGGTGTTAGGAGAGAAAGGAATGGAGGAGAA GGAGAGGGGGTGATTCAGGAAGCTCCAGTGTTTTATCCGACACAGGAGGA GTTTACTGACCCCCTGGCCTATATCTCTAGTATCCGCACTATCGCCGAGC CCGCAGGCATTTGCCGTATCGTCCCTCCTAAGGAGTGGACGCCTCCCTTC ACCATTGATCCTTCAACGTTCAAATTTCCGACGCGCGTACAGAATCTGTC GCGTCTTGGGGCCGCCTCTCGTCTCAGCAAGGATTTTGACAGGCTTTTGC GTCGCTTCATGTTCAAACGCGGCACGCCTCTCGCAGGTCCTGTCCCTATG CCCAAACCAGCAACAGCAGCAGCAGCAACGAGAAAGAAGGAGGAGAAAGG GAAGGAGCAGCAGCAGCAACAGCAAGAACAGCAGCCAGCTGAAATAGGAA GAAGCAGCAAGAGGAAACGTCCCCCTACCCCCTCCATTTCCACCAACACC CCCCCTCCCTCCCTCCCTCCCTCTTCCCGCCCCCCTCAAGCTCCGGTTTT GAATCTGTATTCTCTCTATAAGGCTGTTGTGAGGGAGAGGGGAGGGTATG ATAACGTCTGTCGTTTGGGACTGTGGGAGGCAGTTACTGAAGAGATAGGA GGAGGAGAAGAAGAATCAGAAGAAGAAGGGGAACGGGGAGGAGGAGTGAA CAAGACTCAGGCCAAGAAAGTGAGGAATATTTACAGAGACCTGATCTTGC CATTTGAGAAATGGCAGGCGGGGAGGAAGGCAGCAGCAGCAGCAGCTGCT GCTGCTCCTCCTGCTCCTGCTACTACTACTGCTGCCGCTAGTAGGACTGC CGTCGGTGGGGGAGAAGGAGAAAGAGGACGGGAAGAAGGATACGAAGCAG TAGCAGCAACCGCAACAGCAGTCGTAGAAGGAGTACAGGCGACGACAAAG GCTGCAGAAGATGCCGCAACCCTGCCGACGACCAGCAGCAGCAGCAGCAG CAGCAGCAGCAGCAGCAATAGTAGTCGTGCTACTGATGTTCCAGTTTTTT CTTCCTCCTCCTCGACCAGCAGTAGCAGTAGCTGTAGCTGTAGCAGCAAC AACAACAATAGCTCTACCACCACCTCCTCTACCTCATTTCCTGTTTCTGT GCTTAAGGAGATAAAGGAGGGCGGAAAAGAAAACGCAGTGGAAGAAGGGA TCGACAAGCTGGCTCGGACCCGAGGACGGGCGAAGGGAGTGGCAGGAGTA GCAGCAGCAGCAACAGTAGCCTTGGGACAAATTCTTGATGCAGCCGCAAG TAGGAAAAAAGGAAGAGGAGGGGGAGGAAGAGGAGGACCAGGTGGAAGGG GAGGGGGAACGAGAGGAGGGGACGGAGGGGGAGGAGTCGCGTTCAATCCG AAAGAGTTTGTGGGGAGACAGTTCTGGAGGTATGTGTGCTCCCTCCTCCC TCCTTCCTTCCTTCTCTCCCTTATTCTATAA back to top
|