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Properties
| Property Name | Value |
|---|
| TranscriptId | 601268 |
| Track | FilteredModels2 |
| ProteinId | 601182 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_23 | supercontig | scaffold_23:98029..99887 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8223 ID=mRNA_8223|Name=jgi.p|Nanoce1779_2|601182|organism=Nannochloropsis oceanica|type=mRNA|length=1045bp
ACAGGCTCTCTTTCATCGTCAGCAGCAGCAGTAGTAGCAACAGTAAATCA
AGCTAGGATCATGTCATTCCTCATTCGTACTCCCGCTGATCAAATCAAGC
CCTACTTCTCAGAGGCGGCACAAACTCACTACACTCAGCTCTTTCAGCAT
TTTCCCATCTTGGAGCGGGCCTACTTCCCCTTTGAGAAGAACTTCCGTGC
CGAGCCCTTCGTCGACTTTGCCAAGGCCACGTGGCCGTTACTGCCGTTGG
CGCTTTGTACGGCCTACGCGCTGATGATCGTCATTGGCACCCGCGTCATG
AAGAACAGAGAGAAGTTCGATTGGCGTGGGCCTCTGGCCTACTGGAATCT
GACGCTCTCCCTCTTCTCCTTCTGCGGCATGCTGCGGACGGTCCCGCACC
TGCTCAACAACATCACAACCCTGTCCTTCCGGGACACGGTGTGCACGTCT
GCGGCAAAGAGCTACGGCGAAGGCGCGTCGGGCCTGTGGGTGATGCTCTT
CATCTTCAGCAAAATTCCTGAGCTGGTCGACACGGTTTTCATTGTCTTCC
GCAAAAGCAAGCTTCAATTCCTGCATTGGTACCACCACATCACCGTCCTC
CTCTTCTGCTGGCATTCGTACGCGACTGCCTCCTCCACTGGTCTCTACTT
CGTGGCCATGAACTACTCCGTGCATGCCATCATGTACGGCTACTACTACC
TGATGGCCATTAAAGCTTGGCCTAAGTGGATTCCTGCCCACCTCATTACT
GTCGCGCAGATCTCCCAGATGGTGGTGGGCACATCCCTCTGCATTGCCTC
CTATTACTACAAGAAGGACGGGTATCCATGTGCGGTGGAGTGGGAAAACG
TCACCTCCGGTGCGCTGATGTATGGCTCGTACCTCTATCTCTTCAGCGAA
TTTTTCGTCCGCAGGTTCTTACTGTCGTCGGGCAAGCCCAAGGCCAAGAC
GGTCTAAAGAAAAGGAAGGAAGGGAGGGAGGGAAGGCTGGAGGGCGGTAG
GTGGTCGCCCTGTCCTCGTCCATGGTGTTTGTCGTGCATCGGCAC back to topprotein sequence of jgi.p|Nanoce1779_2|601182 >mRNA_8223-protein ID=mRNA_8223-protein|Name=jgi.p|Nanoce1779_2|601182|organism=Nannochloropsis oceanica|type=polypeptide|length=299bp
MSFLIRTPADQIKPYFSEAAQTHYTQLFQHFPILERAYFPFEKNFRAEPF
VDFAKATWPLLPLALCTAYALMIVIGTRVMKNREKFDWRGPLAYWNLTLS
LFSFCGMLRTVPHLLNNITTLSFRDTVCTSAAKSYGEGASGLWVMLFIFS
KIPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYATASSTGLYFVAM
NYSVHAIMYGYYYLMAIKAWPKWIPAHLITVAQISQMVVGTSLCIASYYY
KKDGYPCAVEWENVTSGALMYGSYLYLFSEFFVRRFLLSSGKPKAKTV* back to topmRNA from alignment at scaffold_23:98029..99887+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8223 ID=mRNA_8223|Name=jgi.p|Nanoce1779_2|601182|organism=Nannochloropsis oceanica|type=mRNA|length=1859bp|location=Sequence derived from alignment at scaffold_23:98029..99887+ (Nannochloropsis oceanica)
ACAGGCTCTCTTTCATCGTCAGCAGCAGCAGTAGTAGCAACAGTAAATCA
AGCTAGGATCATGTCATTCCTCATTCGTACTCCCGCTGATCAAATCAAGC
CCTACTTCTCAGAGGTGCGTGAAGGGCAGAGAGGAAGGGAAAGAGTGAGG
GAGGGAAGGAGGAGGGAGGGAAAGAGGAAGGGAGAGAGAGTGGGGAGGTC
GACTTTAAAGCAGGAAAAACGTGATCATTCCCTCTCTCCCTCCCTCCTCT
CCTTTTCTACAGGCGGCACAAACTCACTACACTCAGCTCTTTCAGCATTT
TCCCATCTTGGAGCGGGCCTACTTCCCCTTTGAGAAGAACTTCCGTGCCG
AGCCCTTCGTCGACTTTGCCAAGGCCACGTGGCCGTTACTGCCGTTGGCG
CTTTGTACGGCCTACGCGCTGATGATCGTCATTGGCACCCGCGTCATGAA
GAACAGGTCCGTCGGTCAATCTGTCTGTCCCTCCTTCCCTACCCTCCCTC
CCTCCTTCCCTTCCTGCCTCTACCCATCAGCCGGCTGTGGTTGCACCTGA
CGACGAGCTCGCCACACCGTGCAATGGTTCGCCCTGTCTTCACTCCCTCG
TTCCCCCCTCGCTCCCCCCTCCGCACTCCCTTGCAGAGAGAAGTTCGATT
GGCGTGGGCCTCTGGCCTACTGGAATCTGACGCTCTCCCTCTTCTCCTTC
TGCGGCATGCTGCGGACGGTCCCGCACCTGCTCAACAACATCACAACCCT
GTCCTTCCGGGACACGGTGTGCACGTCTGCGGCAAAGAGCTACGGCGAAG
GCGCGTCGGGCCTGTGGGTGATGCTCTTCATCTTCAGCAAAATTCCTGAG
CTGGTCGACACGGTTTTCATTGTCTTCCGCAAAAGCAAGCTTCAAGTACG
TTCGTCCCTCCCTCCCTCCTTTCCCACCTCCCTCCCCACCTCCCCCAGAT
ACTCTCCTCGTCGCGTCAAAACGACAGGCACACCTCCCACAAACTGCCCC
ACACTCATCCTCGACCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCA
GTTCCTGCATTGGTACCACCACATCACCGTCCTCCTCTTCTGCTGGCATT
CGTACGCGACTGCCTCCTCCACTGGTCTCTACTTCGTGGCCATGAACTAC
TCCGTGCATGCCATCATGTACGGCTACTACTACCTGGTACGTGCCCTCCC
TCCATCCCTCCCTCCCTCCCTCCTTCACTCCCTCCCTCCCTCTAGTCCTC
GCCGTCCTCTTTGGCCGCCGAGAGCCAGTCAAAGCGTTTCCCGTGCGTCT
CATCCTCTCGGTACTTCCAAACGGAACCTCCCTTCATCCATCCCTTTCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCAGATGGCCATTAAAGCTT
GGCCTAAGTGGATTCCTGCCCACCTCATTACTGTCGCGCAGATCTCCCAG
ATGGTGGTGGGCACATCCCTCTGCATTGCCTCCTATTACTACAAGAAGGT
ACGCCCGTCCTCCCTGCTTTCTTCCTCCTTTATGGAACATTAAAATCACA
GGGTGGGGGACATTGCACACAGACTCAACCTTCCCTCCCTCCCTCCCTTC
CTCCCTCCTGTCGTTCAAACCACCCTTAAGGACGGGTATCCATGTGCGGT
GGAGTGGGAAAACGTCACCTCCGGTGCGCTGATGTATGGCTCGTACCTCT
ATCTCTTCAGCGAATTTTTCGTCCGCAGGTTCTTACTGTCGTCGGGCAAG
CCCAAGGCCAAGACGGTCTAAAGAAAAGGAAGGAAGGGAGGGAGGGAAGG
CTGGAGGGCGGTAGGTGGTCGCCCTGTCCTCGTCCATGGTGTTTGTCGTG
CATCGGCAC back to topCoding sequence (CDS) from alignment at scaffold_23:98029..99887+ >mRNA_8223 ID=mRNA_8223|Name=jgi.p|Nanoce1779_2|601182|organism=Nannochloropsis oceanica|type=CDS|length=5382bp|location=Sequence derived from alignment at scaffold_23:98029..99887+ (Nannochloropsis oceanica)
ATGTCATTCCTCATTCGTACTCCCGCTGATCAAATCAAGCCCTACTTCTC
AGAGGCGGCACAAACTCACTACACTCAGCTCTTTCAGCATTTTCCCATCT
TGGAGCGGGCCTACTTCCCCTTTGAGAAGAACTTCCGTGCCGAGCCCTTC
GTCGACTTTGCCAAGGCCACGTGGCCGTTACTGCCGTTGGCGCTTTGTAC
GGCCTACGCGCTGATGATCGTCATTGGCACCCGCGTCATGAAGAACAGAG
AGAAGTTCGATTGGCGTGGGCCTCTGGCCTACTGGAATCTGACGCTCTCC
CTCTTCTCCTTCTGCGGCATGCTGCGGACGGTCCCGCACCTGCTCAACAA
CATCACAACCCTGTCCTTCCGGGACACGGTGTGCACGTCTGCGGCAAAGA
GCTACGGCGAAGGCGCGTCGGGCCTGTGGGTGATGCTCTTCATCTTCAGC
AAAATTCCTGAGCTGGTCGACACGGTTTTCATTGTCTTCCGCAAAAGCAA
GCTTCAATTCCTGCATTGGTACCACCACATCACCGTCCTCCTCTTCTGCT
GGCATTCGTACGCGACTGCCTCCTCCACTGGTCTCTACTTCGTGGCCATG
AACTACTCCGTGCATGCCATCATGTACGGCTACTACTACCTGATGGCCAT
TAAAGCTTGGCCTAAGTGGATTCCTGCCCACCTCATTACTGTCGCGCAGA
TCTCCCAGATGGTGGTGGGCACATCCCTCTGCATTGCCTCCTATTACTAC
AAGAAGGACGGGTATCCATGTGCGGTGGAGTGGGAAAACGTCACCTCCGG
TGCGCTGATGTATGGCTCGTACCTCTATCTCTTCAGCGAATTTTTCGTCC
GCAGGTTCTTACTGTCGTCGGGCAAGCCCAAGGCCAAGACGGTCTAAATG
TCATTCCTCATTCGTACTCCCGCTGATCAAATCAAGCCCTACTTCTCAGA
GGCGGCACAAACTCACTACACTCAGCTCTTTCAGCATTTTCCCATCTTGG
AGCGGGCCTACTTCCCCTTTGAGAAGAACTTCCGTGCCGAGCCCTTCGTC
GACTTTGCCAAGGCCACGTGGCCGTTACTGCCGTTGGCGCTTTGTACGGC
CTACGCGCTGATGATCGTCATTGGCACCCGCGTCATGAAGAACAGAGAGA
AGTTCGATTGGCGTGGGCCTCTGGCCTACTGGAATCTGACGCTCTCCCTC
TTCTCCTTCTGCGGCATGCTGCGGACGGTCCCGCACCTGCTCAACAACAT
CACAACCCTGTCCTTCCGGGACACGGTGTGCACGTCTGCGGCAAAGAGCT
ACGGCGAAGGCGCGTCGGGCCTGTGGGTGATGCTCTTCATCTTCAGCAAA
ATTCCTGAGCTGGTCGACACGGTTTTCATTGTCTTCCGCAAAAGCAAGCT
TCAATTCCTGCATTGGTACCACCACATCACCGTCCTCCTCTTCTGCTGGC
ATTCGTACGCGACTGCCTCCTCCACTGGTCTCTACTTCGTGGCCATGAAC
TACTCCGTGCATGCCATCATGTACGGCTACTACTACCTGATGGCCATTAA
AGCTTGGCCTAAGTGGATTCCTGCCCACCTCATTACTGTCGCGCAGATCT
CCCAGATGGTGGTGGGCACATCCCTCTGCATTGCCTCCTATTACTACAAG
AAGGACGGGTATCCATGTGCGGTGGAGTGGGAAAACGTCACCTCCGGTGC
GCTGATGTATGGCTCGTACCTCTATCTCTTCAGCGAATTTTTCGTCCGCA
GGTTCTTACTGTCGTCGGGCAAGCCCAAGGCCAAGACGGTCTAAATGTCA
TTCCTCATTCGTACTCCCGCTGATCAAATCAAGCCCTACTTCTCAGAGGC
GGCACAAACTCACTACACTCAGCTCTTTCAGCATTTTCCCATCTTGGAGC
GGGCCTACTTCCCCTTTGAGAAGAACTTCCGTGCCGAGCCCTTCGTCGAC
TTTGCCAAGGCCACGTGGCCGTTACTGCCGTTGGCGCTTTGTACGGCCTA
CGCGCTGATGATCGTCATTGGCACCCGCGTCATGAAGAACAGAGAGAAGT
TCGATTGGCGTGGGCCTCTGGCCTACTGGAATCTGACGCTCTCCCTCTTC
TCCTTCTGCGGCATGCTGCGGACGGTCCCGCACCTGCTCAACAACATCAC
AACCCTGTCCTTCCGGGACACGGTGTGCACGTCTGCGGCAAAGAGCTACG
GCGAAGGCGCGTCGGGCCTGTGGGTGATGCTCTTCATCTTCAGCAAAATT
CCTGAGCTGGTCGACACGGTTTTCATTGTCTTCCGCAAAAGCAAGCTTCA
ATTCCTGCATTGGTACCACCACATCACCGTCCTCCTCTTCTGCTGGCATT
CGTACGCGACTGCCTCCTCCACTGGTCTCTACTTCGTGGCCATGAACTAC
TCCGTGCATGCCATCATGTACGGCTACTACTACCTGATGGCCATTAAAGC
TTGGCCTAAGTGGATTCCTGCCCACCTCATTACTGTCGCGCAGATCTCCC
AGATGGTGGTGGGCACATCCCTCTGCATTGCCTCCTATTACTACAAGAAG
GACGGGTATCCATGTGCGGTGGAGTGGGAAAACGTCACCTCCGGTGCGCT
GATGTATGGCTCGTACCTCTATCTCTTCAGCGAATTTTTCGTCCGCAGGT
TCTTACTGTCGTCGGGCAAGCCCAAGGCCAAGACGGTCTAAATGTCATTC
CTCATTCGTACTCCCGCTGATCAAATCAAGCCCTACTTCTCAGAGGCGGC
ACAAACTCACTACACTCAGCTCTTTCAGCATTTTCCCATCTTGGAGCGGG
CCTACTTCCCCTTTGAGAAGAACTTCCGTGCCGAGCCCTTCGTCGACTTT
GCCAAGGCCACGTGGCCGTTACTGCCGTTGGCGCTTTGTACGGCCTACGC
GCTGATGATCGTCATTGGCACCCGCGTCATGAAGAACAGAGAGAAGTTCG
ATTGGCGTGGGCCTCTGGCCTACTGGAATCTGACGCTCTCCCTCTTCTCC
TTCTGCGGCATGCTGCGGACGGTCCCGCACCTGCTCAACAACATCACAAC
CCTGTCCTTCCGGGACACGGTGTGCACGTCTGCGGCAAAGAGCTACGGCG
AAGGCGCGTCGGGCCTGTGGGTGATGCTCTTCATCTTCAGCAAAATTCCT
GAGCTGGTCGACACGGTTTTCATTGTCTTCCGCAAAAGCAAGCTTCAATT
CCTGCATTGGTACCACCACATCACCGTCCTCCTCTTCTGCTGGCATTCGT
ACGCGACTGCCTCCTCCACTGGTCTCTACTTCGTGGCCATGAACTACTCC
GTGCATGCCATCATGTACGGCTACTACTACCTGATGGCCATTAAAGCTTG
GCCTAAGTGGATTCCTGCCCACCTCATTACTGTCGCGCAGATCTCCCAGA
TGGTGGTGGGCACATCCCTCTGCATTGCCTCCTATTACTACAAGAAGGAC
GGGTATCCATGTGCGGTGGAGTGGGAAAACGTCACCTCCGGTGCGCTGAT
GTATGGCTCGTACCTCTATCTCTTCAGCGAATTTTTCGTCCGCAGGTTCT
TACTGTCGTCGGGCAAGCCCAAGGCCAAGACGGTCTAAATGTCATTCCTC
ATTCGTACTCCCGCTGATCAAATCAAGCCCTACTTCTCAGAGGCGGCACA
AACTCACTACACTCAGCTCTTTCAGCATTTTCCCATCTTGGAGCGGGCCT
ACTTCCCCTTTGAGAAGAACTTCCGTGCCGAGCCCTTCGTCGACTTTGCC
AAGGCCACGTGGCCGTTACTGCCGTTGGCGCTTTGTACGGCCTACGCGCT
GATGATCGTCATTGGCACCCGCGTCATGAAGAACAGAGAGAAGTTCGATT
GGCGTGGGCCTCTGGCCTACTGGAATCTGACGCTCTCCCTCTTCTCCTTC
TGCGGCATGCTGCGGACGGTCCCGCACCTGCTCAACAACATCACAACCCT
GTCCTTCCGGGACACGGTGTGCACGTCTGCGGCAAAGAGCTACGGCGAAG
GCGCGTCGGGCCTGTGGGTGATGCTCTTCATCTTCAGCAAAATTCCTGAG
CTGGTCGACACGGTTTTCATTGTCTTCCGCAAAAGCAAGCTTCAATTCCT
GCATTGGTACCACCACATCACCGTCCTCCTCTTCTGCTGGCATTCGTACG
CGACTGCCTCCTCCACTGGTCTCTACTTCGTGGCCATGAACTACTCCGTG
CATGCCATCATGTACGGCTACTACTACCTGATGGCCATTAAAGCTTGGCC
TAAGTGGATTCCTGCCCACCTCATTACTGTCGCGCAGATCTCCCAGATGG
TGGTGGGCACATCCCTCTGCATTGCCTCCTATTACTACAAGAAGGACGGG
TATCCATGTGCGGTGGAGTGGGAAAACGTCACCTCCGGTGCGCTGATGTA
TGGCTCGTACCTCTATCTCTTCAGCGAATTTTTCGTCCGCAGGTTCTTAC
TGTCGTCGGGCAAGCCCAAGGCCAAGACGGTCTAAATGTCATTCCTCATT
CGTACTCCCGCTGATCAAATCAAGCCCTACTTCTCAGAGGCGGCACAAAC
TCACTACACTCAGCTCTTTCAGCATTTTCCCATCTTGGAGCGGGCCTACT
TCCCCTTTGAGAAGAACTTCCGTGCCGAGCCCTTCGTCGACTTTGCCAAG
GCCACGTGGCCGTTACTGCCGTTGGCGCTTTGTACGGCCTACGCGCTGAT
GATCGTCATTGGCACCCGCGTCATGAAGAACAGAGAGAAGTTCGATTGGC
GTGGGCCTCTGGCCTACTGGAATCTGACGCTCTCCCTCTTCTCCTTCTGC
GGCATGCTGCGGACGGTCCCGCACCTGCTCAACAACATCACAACCCTGTC
CTTCCGGGACACGGTGTGCACGTCTGCGGCAAAGAGCTACGGCGAAGGCG
CGTCGGGCCTGTGGGTGATGCTCTTCATCTTCAGCAAAATTCCTGAGCTG
GTCGACACGGTTTTCATTGTCTTCCGCAAAAGCAAGCTTCAATTCCTGCA
TTGGTACCACCACATCACCGTCCTCCTCTTCTGCTGGCATTCGTACGCGA
CTGCCTCCTCCACTGGTCTCTACTTCGTGGCCATGAACTACTCCGTGCAT
GCCATCATGTACGGCTACTACTACCTGATGGCCATTAAAGCTTGGCCTAA
GTGGATTCCTGCCCACCTCATTACTGTCGCGCAGATCTCCCAGATGGTGG
TGGGCACATCCCTCTGCATTGCCTCCTATTACTACAAGAAGGACGGGTAT
CCATGTGCGGTGGAGTGGGAAAACGTCACCTCCGGTGCGCTGATGTATGG
CTCGTACCTCTATCTCTTCAGCGAATTTTTCGTCCGCAGGTTCTTACTGT
CGTCGGGCAAGCCCAAGGCCAAGACGGTCTAA back to top
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